Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_05g0020960 | OGI:05064760 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr05:25141518-25147457 | ||||||||
| Gene Symbol | OsRPK1 | ||||||||||
| DNA seq | AAAGAATCTGAAGTAGTATATTGATATTGCAACACATACAAAATTTACAATTCATCACAAGCTGAAAAAGAGAAGAACCAAAGGAAAAAAAACTGAAACAAAAACACCTCAATTTACAATCTGATGATCACTGATGACTACTTGGGCTTGACCTCGAAATAGGGCATGTAATCCGACGCGCCGTCGCCGGCGTACGATCCCCGGCTGATCTCCACGTCGCTGTAGGGGTGCGCCGGCGGGCCACCGCCGCCGCCGCCGCCGCGGTAGCGGTCGAACTCGTTGGCGGACGGGTCGGCGGAGCTGTCCCCCTCCCCGGCGCCGGCGTCGTCGGGCTCGTTCTGCAGCATGGCCTCGATCTCCTTCACCACGGCGCCCATGGCCGGGCGCGCCGCCGCCGACTCGTCGACGCACCGCATCGCCAGCTGCACGAACCGCCGGAACACGGGGGTGCGCGCCGCGTCGCGGATGGCCGGGTCGACGATCCCGCGGAGGCCGTAGTGGTGGTCGTGGTCGGCCGGGTCGATGGCCAGCCGCACCTCCCGCACTACGTACCGCCCCTTCTCGATCGGCTGCCTCCCGCTCACCAGCTCCAGCATCACCACCCCGAAGCTGTACACGTCGCTCTTCTCCGACAGCTGCTGCGTCATGTAGTACTCCGGGTCCAGGTAGCCCTAGCCACATCCCATCGATTTTATTACCATTTGTTTCAATCTTGATTGTTTTCTTTATACTATCAGATCAAATTAAGCATATCTATTTCAATTGGTCCTCAAGATGTTCGTCGAATTTTACTGAAGCGAACCTAAAAGTTCAGTTATGTCAGGAGACTTGCAGAAGTGGTTAGTAGGGTGAATTTTATCAATTTGTCATGAGATTGGAAGAAGTGGTTAGTAAGGTGAATTTTATCGATTTATTTTGAGATTGGGAGAAGTGGTTAGTAAGGTGAAGTGCAATGGGTACATGCTTAGTTACCATATTTACTTCAAGTTTGATTTCAAATTAAGCATATCGATTTTGATTGGTTCTCAAGATGTTAGTAGATTTTTATTAGTGAGTACTGAAGTGAGGCTCAAAATTCAGTTCTGTCAGGAGATTGGCATGAGCGGATAGTGAGGGGAATTTACCAGTGTTCCCTTGACTTGGGTGGAGACATGGCCCTTCTCAGTGTCGGCCACGAGCTTGGAGAGCCCGAAGTCGGCAACCTTGGCCTTGAGGTTGTTGTCGAGGAGGATGTTGGTGGACTTGATGTCGCGGTGGATGATCGGTGGGTCAGCGAGCTCGTGCAGGTAGGCAAGCCCTCTGGCCGAGCCAAGCGCGATCCTCAGCCTCTTCTTCCAGTCCAAGTACGTCCCACTTCCTGCAAATCAAAACCTTTTCAGTTAACATTTGATAAAAGAATCATTTTAGCAATGCAAACGAAATGGCGAAATAAAATGTGTAATCAGATTCATGGCAATGTTAATTATGGGATGTGGATTTACCCGTCAAGTTCTCTCTGAGTGTGCCATTGGAGATGTACTCGTAGACGAGCATCTGTTCACCTTGCTCGTAGCAGAAGCCAATGAGGCTGACCAGGTTGCGGTGGTGCACCCTGGACAGCAGCTCGATCTCGTTCTTGAACTCCACAGCGCCCTGCATTGAGTTGCGGTCTGCACGCTTGATGGCGACACAGGTTCCGTCACCGAGAATCCCTCTGTACACCTTCCCGTAGCCTCCTGACCCGATCTCGTGGTTGTCAGAGAAGTTGTTGGTGCAGATCTTGAGCTCGTCAAAGGAGAAGAACCTTGCTCCCTTCAGCTGTGGAGCCCCTCCACTGTCCTTCTGGCCAGCAGCCCATGAAGCTGAAAATTTTGGATCAGAAAACAGGTTCAGTTGTTTCAGAACTTCTTGATCTTGTCAGTTTATTCCAGTAGTAGCATGCAGTAGGATGCTGCTGCTTGTAGCTGTTAATGTGTCCCTGACAAATTGCTTGGTGGCATTGCAGTGACATGATACCTATGAGCTTTTAGATCCTTACCAAAAGGGTCTGCTCTTTCCTTGAGTTCCTTAGCCCTTCTCTTCTGTCGGAGAGCAAACAATGACATGAAAATGAGGGCGATAACAAGGACCCCACCGGCTACTGCAATTCCAGCTATGGCACCTGTGCTCATCTTGGATTTTTTGCCACCAAGAGCAACTGGCACACACAAAATCAGAGTGAGCAATCCTCACACCACTATATACTAGTACTTTTGTGCAAATACTAAACTCTCCGACATAAAATAGCAGAGTCCTTTTAGCATCTCATTAATTGCAATTTAGAAGTAAAAAATTAAAACTTTCAAGATACCAACCCTCAGATAACGAAATGTGGTATTTCCTAAGCTGTAATTTTGATACCTCTGCATTCTCAAAGGGAAAACTAAAACTACTTCAGTGCAAATAAAGTGGGAGTCTCGACACAGTGAAATCCAAGTACCTGCCAAGGGGGCATATGGGTCTGCAATGAAGAAATAAGGTCCAAAATTTGCTGGTGGTTTGTAAATCTGGTTACTGAGAGAAGAACCAATCCTTGTCAATTCTGACAGGTTGAAGGTCACCCCGGATGTTGGGAACAGCTTCACTTGAACTTGGAGGTAGTTGTCACTGTTGAAGTGGATGTCTGAGAGAGCGACTGAGCCAGGGAGCAGGTTCAGCTTTGCCGCCATGGTCGACTCCAGCAGCTGGAACGGTGTACTGCTCACCAAGTCGACGAAGAAGGGTGCCCTGAAAACCATCTTGCCGTTGTATGAGAAAGCACAGCCGCAGCTTGCAGGGTTCACGTTCTGACCATCACTGCACTGAGCTGAGCCGCATTTTTCCATACTGGTACTGTATGGGCTCGCGTTCTGTAGCTGCCTGCTGCAGAAGGCTCTGTTGTTGGGATCTTGCTCGGCACAAAACGGATTACCTGCCAGGCTGCAGACAGGATATGGCATGAGAAGTGAGGCAATGTTGGTGAAAGGTAGGAGAGAAGACGAAGATTGTATGGTGTTCTTGGTTCTTATTGAGTTTGCAGGTTCTTACAGCAGAGTTTTCTTGTAGCTTGCAGTATCGGTAGAAACTATTCGGTTGTCCATGAGATTTACTGTCTGCAGTGAGCTGCTGATGTTGCCTGTAATTTCAAGTGTCCCGTTGAATTGGTTGTTGCTCAGCACACTGTCCGATTGGCCACAAAATAGGCAGAGATAAGACACTTTTTTTTAAAGCTTATATGTTGAGTTGTAAGTTACCAGAAAATTACACTTGCTGCAGTGTGGGCAATGTGAAGAGCCCCTTTGGGACCTGGCCAGAAAGACTTCCAGAAACTATTGAACTGAGTGATCAAAACATATAGAGATGAGTATGAAATTGTCATCACAAGACGACACAAAATTTAAAATTCCAAAAGTTTTGGATAACTCACACAGAAGCAAGAGATGTTAAAGATGTGAACCAGCTGGGGGCCACTGAAGGATCAAATGTGTTGTTGCTCAAATCCCTGGCAATTCAAGAGTGGAATCTTTAGTTATGCAGACAAATTATATGATTGGATGATGAGGCATGGGGGTGGTTAGTTTCTTACACAACATTCAAGTTGGTCATGTTGCTGAGATCTGGCACTGATCCAGTTAGCTTGTTGTTTGCTAAGTTCCTGCAGAAGATAACATTTTCAAGAGAGGTGCCTCAAGTGTCATAATTCTTCCTTTAAGATCAGATGTCACTTACAGCTCATTCAGTTTGACCAAACTGCCAATTGTAGCAGGTATTGCTCCCGTAAAACCATTCCTATCCAATCGGCTGTCAAAGATACAAAAGCAAGTCAAAGATATGACCAATTTTTTTTGGAGAAAATAAAAGGATGAGTTCCACCTATGTGAACTTTCAAGATACTTACAGAACTTCAAGTGTACTAACAGTCCCAACCTCAGCTGGGATTGAGCCTGAGAATTTGTTGCTATCAAACAAACTGATGAGATAGGGAGAGATGTTAGCAAGATATATCTATTCAGTATTCATATTAGACATGAAAATTTGTCGATCCCTTACATGTGTATGAGAGTCATATTGGAGTTGAAAAGTCCAGTAAGCGTTCCAGTTAACTGGTTCTTGTTGAAATGGCTGTTCATCAATTTGAAGTTTGGAGCAAAACAATCAATTGTAAGTACTTACATATTCTGATATTTCTCAATTGATAATACCATAAAGTAAGATTAAAATTACTTACAAGTGCTGCGTTTTGACAAGTTGGTCCAGGCCTGGTGATGTTGATGTTGAGATGGGGACAGATCCAGTGAGTTGATTATCAGCCAGGTCTAGCCATAAGAGGTTTGTGAGTACGCCAATCGAAGACGGTATTCCACCACTAAACTTGTTTGAATTCAAGGCCCTATAGAGAATGGCACGAATTCATTATGTCAATCCACTCAAAAGAAAAGAAAAAAGGGTTTATCATCTGAGCTGTGGACCAGGTATATCCACTTACAAGAACCCAAGTTTCCGCAGGTTGCCTATTGCTATTGGAATGTTTCCAGTGAAGCTGCAACCAGCTAAGATCCTGACAATTACACAGCATTTGTGCACATCAGTAAGAAAGTTTGGTATTTCTGATTGGAAAAAGTAGTGTTGACAACAATGGGCAGTGCGGCGCATACAGTGTCGTAAGCTCCCCAAGGTTCCCAATCTCAGCTGGCAGCGGACCACCGAGATTGATGTTGAAGGAAAGATCCCTGCAAGTGTTTCTGTTATCAGCTACTACTACTAGACTATTTCTTCTTAGACAAATTAGTTGTACTCCAGAACTTTGTCACGGATCATTTCATCCAGGTACGTTTGCTATTGATAATTTAACTTCAAGTGTAGTATCTTGTTTCTTTCTTTTGGTAAGAAATGAGCCTAATCCATGTCACATTGCGAAAATAGTCAAAGCTTCAGATATTTCATCCAGATCTATTTACTATTGTAACTTGGCATCATATCTTTGTTTCTTTCATTTGGTAAGAAATGAACCTAATCCATGTCACATTGCCGAAATAGTCAAAGCTTAAGATTGGTAAACATGAACTGGTCAGCTGAACTAAGCCTCAAGAAAAAAAAAAGCAGAGTTCATAAACTAGAAGCAAACTGTTCTGACAATCTGCCCCTTGACTGGTTCAATCAGAAGTTCCTAGCCTGATTGCCTGAATTCACAATCTGAACTGCTACAGAAGCATGAACAAAATTTCGAAAATCCCAAGTTCATAGCCTGCAAAATCATGCTGTTTTGCACTTTTGCTAAGCTGGGTGATGAACTGATGATAGAAGAAGGCGCTTACAGGTACGTGAGCTGGCCGAGCTGGCCGATGCTGCTGCTCAGTGTTCCCTGCAGGCTGACGCTTGACAGCCTCCTGCAAAAACCAGAGACATCCATGGCACGATTTCAGAGGAAGGCCCATCACATGATATTGGTGGTAGGAGGAGAAGGAGATGGCTGTAACTTACAGCGTCGTCACCCTGCCGTTGGTGCACATGATGCCGTCCCATCCGCCGCCGCAGGGGTCGCCGGAGTTCCAGCTCAACGGGTAGTTCGTCCATTGGCTCTTCAGCCCCTCGAGCGCCGCAGCTGCACGCATGCATGCCCAAGAAGAAGATCATCAACACCAGCAACAAAAACCAAGCGATTCTTCTCCGGGCAAGAAGATCCTGCCTGACTTTAGAATCATCTATGGAAGAAACGGAGGTGATCGCCGGCGGCGAGGCAAGAGCACTCACCGTCCTGGGCGTTGGTCTGGCACAACACCGCCGGCACGCCCGCCGCCACCACCACCAGCGCAAGCGCCATCAACACCCGCGGCTCCATCCTGCGCCGCGCCGTCGCCGGCGAGGCAAGCCACCGGGAGAGCTAGCACACGCTTGTGCTCTGCTTGACCGGAGATCGTGGAGGAGGAGGTGGAGGAAGAAGAG
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| CDS seq | ATGGAGCCGCGGGTGTTGATGGCGCTTGCGCTGGTGGTGGTGGCGGCGGGCGTGCCGGCGGTGTTGTGCCAGACCAACGCCCAGGACGCTGCGGCGCTCGAGGGGCTGAAGAGCCAATGGACGAACTACCCGTTGAGCTGGAACTCCGGCGACCCCTGCGGCGGCGGATGGGACGGCATCATGTGCACCAACGGCAGGGTGACGACGCTGAGGCTGTCAAGCGTCAGCCTGCAGGGAACACTGAGCAGCAGCATCGGCCAGCTCGGCCAGCTCACGTACCTGGATCTTTCCTTCAACATCAATCTCGGTGGTCCGCTGCCAGCTGAGATTGGGAACCTTGGGGAGCTTACGACACTGATCTTAGCTGGTTGCAGCTTCACTGGAAACATTCCAATAGCAATAGGCAACCTGCGGAAACTTGGGTTCTTGGCCTTGAATTCAAACAAGTTTAGTGGTGGAATACCGTCTTCGATTGGCGTACTCACAAACCTCTTATGGCTAGACCTGGCTGATAATCAACTCACTGGATCTGTCCCCATCTCAACATCAACATCACCAGGCCTGGACCAACTTGTCAAAACGCAGCACTTCCATTTCAACAAGAACCAGTTAACTGGAACGCTTACTGGACTTTTCAACTCCAATATGACTCTCATACACATTTTGTTTGATAGCAACAAATTCTCAGGCTCAATCCCAGCTGAGGTTGGGACTGTTAGTACACTTGAAGTTCTCCGATTGGATAGGAATGGTTTTACGGGAGCAATACCTGCTACAATTGGCAGTTTGGTCAAACTGAATGAGCTGAACTTAGCAAACAACAAGCTAACTGGATCAGTGCCAGATCTCAGCAACATGACCAACTTGAATGTTGTGGATTTGAGCAACAACACATTTGATCCTTCAGTGGCCCCCAGCTGGTTCACATCTTTAACATCTCTTGCTTCTGTTTCAATAGTTTCTGGAAGTCTTTCTGGCCAGGTCCCAAAGGGGCTCTTCACATTGCCCACACTGCAGCAAGTTGTGCTGAGCAACAACCAATTCAACGGGACACTTGAAATTACAGGCAACATCAGCAGCTCACTGCAGACAGTAAATCTCATGGACAACCGAATAGTTTCTACCGATACTGCAAGCTACAAGAAAACTCTGCTCCTGGCAGGTAATCCGTTTTGTGCCGAGCAAGATCCCAACAACAGAGCCTTCTGCAGCAGGCAGCTACAGAACGCGAGCCCATACAGTACCAGTATGGAAAAATGCGGCTCAGCTCAGTGCAGTGATGGTCAGAACGTGAACCCTGCAAGCTGCGGCTGTGCTTTCTCATACAACGGCAAGATGGTTTTCAGGGCACCCTTCTTCGTCGACTTGGTGAGCAGTACACCGTTCCAGCTGCTGGAGTCGACCATGGCGGCAAAGCTGAACCTGCTCCCTGGCTCAGTCGCTCTCTCAGACATCCACTTCAACAGTGACAACTACCTCCAAGTTCAAGTGAAGCTGTTCCCAACATCCGGGGTGACCTTCAACCTGTCAGAATTGACAAGGATTGGTTCTTCTCTCAGTAACCAGATTTACAAACCACCAGCAAATTTTGGACCTTATTTCTTCATTGCAGACCCATATGCCCCCTTGGCAGTTGCTCTTGGTGGCAAAAAATCCAAGATGAGCACAGGTGCCATAGCTGGAATTGCAGTAGCCGGTGGGGTCCTTGTTATCGCCCTCATTTTCATGTCATTGTTTGCTCTCCGACAGAAGAGAAGGGCTAAGGAACTCAAGGAAAGAGCAGACCCTTTTGCTTCATGGGCTGCTGGCCAGAAGGACAGTGGAGGGGCTCCACAGCTGAAGGGAGCAAGGTTCTTCTCCTTTGACGAGCTCAAGATCTGCACCAACAACTTCTCTGACAACCACGAGATCGGGTCAGGAGGCTACGGGAAGGTGTACAGAGGGATTCTCGGTGACGGAACCTGTGTCGCCATCAAGCGTGCAGACCGCAACTCAATGCAGGGCGCTGTGGAGTTCAAGAACGAGATCGAGCTGCTGTCCAGGGTGCACCACCGCAACCTGGTCAGCCTCATTGGCTTCTGCTACGAGCAAGGTGAACAGATGCTCGTCTACGAGTACATCTCCAATGGCACACTCAGAGAGAACTTGACGGTAAATATGGGCTACCTGGACCCGGAGTACTACATGACGCAGCAGCTGTCGGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGCTGGAGCTGGTGAGCGGGAGGCAGCCGATCGAGAAGGGGCGGTACGTAGTGCGGGAGGTGCGGCTGGCCATCGACCCGGCCGACCACGACCACCACTACGGCCTCCGCGGGATCGTCGACCCGGCCATCCGCGACGCGGCGCGCACCCCCGTGTTCCGGCGGTTCGTGCAGCTGGCGATGCGGTGCGTCGACGAGTCGGCGGCGGCGCGCCCGGCCATGGGCGCCGTGGTGAAGGAGATCGAGGCCATGCTGCAGAACGAGCCCGACGACGCCGGCGCCGGGGAGGGGGACAGCTCCGCCGACCCGTCCGCCAACGAGTTCGACCGCTACCGCGGCGGCGGCGGCGGCGGTGGCCCGCCGGCGCACCCCTACAGCGACGTGGAGATCAGCCGGGGATCGTACGCCGGCGACGGCGCGTCGGATTACATGCCCTATTTCGAGGTCAAGCCCAAGTAG
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| Protein seq | MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGIMCTNGRVTTLRLSSVSLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLILAGCSFTGNIPIAIGNLRKLGFLALNSNKFSGGIPSSIGVLTNLLWLDLADNQLTGSVPISTSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDSNKFSGSIPAEVGTVSTLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFDPSVAPSWFTSLTSLASVSIVSGSLSGQVPKGLFTLPTLQQVVLSNNQFNGTLEITGNISSSLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNNRAFCSRQLQNASPYSTSMEKCGSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLNLLPGSVALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPYAPLAVALGGKKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASWAAGQKDSGGAPQLKGARFFSFDELKICTNNFSDNHEIGSGGYGKVYRGILGDGTCVAIKRADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTVNMGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVREVRLAIDPADHDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKEIEAMLQNEPDDAGAGEGDSSADPSANEFDRYRGGGGGGGPPAHPYSDVEISRGSYAGDGASDYMPYFEVKPK |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0020960 | OsIR64_05g0020960.01 | Chr05 | 25141655 | 25147457 | - | NAM | ||
| CDS seq | ATGGAGCCGCGGGTGTTGATGGCGCTTGCGCTGGTGGTGGTGGCGGCGGGCGTGCCGGCGGTGTTGTGCCAGACCAACGCCCAGGACGCTGCGGCGCTCGAGGGGCTGAAGAGCCAATGGACGAACTACCCGTTGAGCTGGAACTCCGGCGACCCCTGCGGCGGCGGATGGGACGGCATCATGTGCACCAACGGCAGGGTGACGACGCTGAGGCTGTCAAGCGTCAGCCTGCAGGGAACACTGAGCAGCAGCATCGGCCAGCTCGGCCAGCTCACGTACCTGGATCTTTCCTTCAACATCAATCTCGGTGGTCCGCTGCCAGCTGAGATTGGGAACCTTGGGGAGCTTACGACACTGATCTTAGCTGGTTGCAGCTTCACTGGAAACATTCCAATAGCAATAGGCAACCTGCGGAAACTTGGGTTCTTGGCCTTGAATTCAAACAAGTTTAGTGGTGGAATACCGTCTTCGATTGGCGTACTCACAAACCTCTTATGGCTAGACCTGGCTGATAATCAACTCACTGGATCTGTCCCCATCTCAACATCAACATCACCAGGCCTGGACCAACTTGTCAAAACGCAGCACTTCCATTTCAACAAGAACCAGTTAACTGGAACGCTTACTGGACTTTTCAACTCCAATATGACTCTCATACACATTTTGTTTGATAGCAACAAATTCTCAGGCTCAATCCCAGCTGAGGTTGGGACTGTTAGTACACTTGAAGTTCTCCGATTGGATAGGAATGGTTTTACGGGAGCAATACCTGCTACAATTGGCAGTTTGGTCAAACTGAATGAGCTGAACTTAGCAAACAACAAGCTAACTGGATCAGTGCCAGATCTCAGCAACATGACCAACTTGAATGTTGTGGATTTGAGCAACAACACATTTGATCCTTCAGTGGCCCCCAGCTGGTTCACATCTTTAACATCTCTTGCTTCTGTTTCAATAGTTTCTGGAAGTCTTTCTGGCCAGGTCCCAAAGGGGCTCTTCACATTGCCCACACTGCAGCAAGTTGTGCTGAGCAACAACCAATTCAACGGGACACTTGAAATTACAGGCAACATCAGCAGCTCACTGCAGACAGTAAATCTCATGGACAACCGAATAGTTTCTACCGATACTGCAAGCTACAAGAAAACTCTGCTCCTGGCAGGTAATCCGTTTTGTGCCGAGCAAGATCCCAACAACAGAGCCTTCTGCAGCAGGCAGCTACAGAACGCGAGCCCATACAGTACCAGTATGGAAAAATGCGGCTCAGCTCAGTGCAGTGATGGTCAGAACGTGAACCCTGCAAGCTGCGGCTGTGCTTTCTCATACAACGGCAAGATGGTTTTCAGGGCACCCTTCTTCGTCGACTTGGTGAGCAGTACACCGTTCCAGCTGCTGGAGTCGACCATGGCGGCAAAGCTGAACCTGCTCCCTGGCTCAGTCGCTCTCTCAGACATCCACTTCAACAGTGACAACTACCTCCAAGTTCAAGTGAAGCTGTTCCCAACATCCGGGGTGACCTTCAACCTGTCAGAATTGACAAGGATTGGTTCTTCTCTCAGTAACCAGATTTACAAACCACCAGCAAATTTTGGACCTTATTTCTTCATTGCAGACCCATATGCCCCCTTGGCAGTTGCTCTTGGTGGCAAAAAATCCAAGATGAGCACAGGTGCCATAGCTGGAATTGCAGTAGCCGGTGGGGTCCTTGTTATCGCCCTCATTTTCATGTCATTGTTTGCTCTCCGACAGAAGAGAAGGGCTAAGGAACTCAAGGAAAGAGCAGACCCTTTTGCTTCATGGGCTGCTGGCCAGAAGGACAGTGGAGGGGCTCCACAGCTGAAGGGAGCAAGGTTCTTCTCCTTTGACGAGCTCAAGATCTGCACCAACAACTTCTCTGACAACCACGAGATCGGGTCAGGAGGCTACGGGAAGGTGTACAGAGGGATTCTCGGTGACGGAACCTGTGTCGCCATCAAGCGTGCAGACCGCAACTCAATGCAGGGCGCTGTGGAGTTCAAGAACGAGATCGAGCTGCTGTCCAGGGTGCACCACCGCAACCTGGTCAGCCTCATTGGCTTCTGCTACGAGCAAGGTGAACAGATGCTCGTCTACGAGTACATCTCCAATGGCACACTCAGAGAGAACTTGACGGTAAATATGGGCTACCTGGACCCGGAGTACTACATGACGCAGCAGCTGTCGGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGCTGGAGCTGGTGAGCGGGAGGCAGCCGATCGAGAAGGGGCGGTACGTAGTGCGGGAGGTGCGGCTGGCCATCGACCCGGCCGACCACGACCACCACTACGGCCTCCGCGGGATCGTCGACCCGGCCATCCGCGACGCGGCGCGCACCCCCGTGTTCCGGCGGTTCGTGCAGCTGGCGATGCGGTGCGTCGACGAGTCGGCGGCGGCGCGCCCGGCCATGGGCGCCGTGGTGAAGGAGATCGAGGCCATGCTGCAGAACGAGCCCGACGACGCCGGCGCCGGGGAGGGGGACAGCTCCGCCGACCCGTCCGCCAACGAGTTCGACCGCTACCGCGGCGGCGGCGGCGGCGGTGGCCCGCCGGCGCACCCCTACAGCGACGTGGAGATCAGCCGGGGATCGTACGCCGGCGACGGCGCGTCGGATTACATGCCCTATTTCGAGGTCAAGCCCAAGTAG
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| Protein seq | MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGIMCTNGRVTTLRLSSVSLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLILAGCSFTGNIPIAIGNLRKLGFLALNSNKFSGGIPSSIGVLTNLLWLDLADNQLTGSVPISTSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDSNKFSGSIPAEVGTVSTLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFDPSVAPSWFTSLTSLASVSIVSGSLSGQVPKGLFTLPTLQQVVLSNNQFNGTLEITGNISSSLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNNRAFCSRQLQNASPYSTSMEKCGSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLNLLPGSVALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPYAPLAVALGGKKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASWAAGQKDSGGAPQLKGARFFSFDELKICTNNFSDNHEIGSGGYGKVYRGILGDGTCVAIKRADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTVNMGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVREVRLAIDPADHDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKEIEAMLQNEPDDAGAGEGDSSADPSANEFDRYRGGGGGGGPPAHPYSDVEISRGSYAGDGASDYMPYFEVKPK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0020960 | OsIR64_05g0020960.02 | Chr05 | 25141518 | 25145007 | - | IsoSeq | ||
| CDS seq | ATGGGCTGCTGGCCAGAAGGACAGTGGAGGGGCTCCACAGCTGAAGGGAGCAAGGTTCTTCTC |
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| Protein seq | MGCWPEGQWRGSTAEGSKVLL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| MX | Chr05 | 25142188 | 25142999 | - | OsIR64_05g0020960.01 | OsIR64_05g0020960.01,OsIR64_05g0020960.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.442782 | 2.983289 | 0.948644 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0486100 | RBH | 0.428003 | 0.095399 | 1.781093 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g40770 | RBH | 0.396130 | 0.054266 | 0.460232 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0486100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021430 | RBH | 0.055532 | 38.913666 | 3.065746 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021390 | RBH | 0.000000 | 11.729213 | 1.439806 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0021300 | RBH | 1.162102 | 28.787960 | 2.943667 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021320 | RBH | 0.083368 | 0.441018 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0021420 | RBH | 1.701580 | 18.854773 | 9.007953 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0370000 | SBH | 1.856281 | 46.919216 | 1.8363005 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036680 | SBH | 0.026429 | 0.131292 | 0.246046 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0379400 | SBH | 1.9579205 | 50.49185 | 3.83621 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021280 | RBH | 0.045067 | 0.581331 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021190 | RBH | 0.127866 | 14.464831 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021310 | RBH | 0.0 | 26.197977 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021370 | RBH | 0.264251 | 4.088369 | 0.789199 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021350 | RBH | 0.597492 | 22.930204 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020810 | RBH | 0.231811 | 6.945503 | 0.572508 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021230 | RBH | 1.507296 | 64.602875 | 1.936974 |
