Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsPr106_04g0027840		OGI:04093920 \| 1/16			PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)			Chr04:33322037-33326572		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		atggattccaccgtgagagcggcgcggtgggtgctgagcaaggcgctgggccccgtgacggacggcttggtggaggcgtgggcggccagctcggagctcggccccaacgtcagcgccctcaagatggagctgcttcacgcgccggggatgctggacaacgcccagggcaatgagacccgtagccccgcgttgaaaagctgctgctgcaggagctgcggcaggtcgcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacaagctgtaccacacctaccacgccgcggacgagcacgccagcggttgcgtctgcaaccttgtccagaatgctagccacactgccaaggctgtagctcgcaagctcaaatgctgcccgcgcacaggtgatgccaaacctgcaggtgaccccgacgacgagtcggaaggcgaccaagacggagatgctcgacacggaggagccatcagctgtgtttgcccaagcgtcaatatcggtaagtgccttctaactttagtcccacagtgatagataatgattgaaactaactcatatattgcatgttggaccccaacatgccaggaattggacggcgaatcctctttggtgcctgctcattcatggcaccagaggaaaaacgcttcattgaagcacccaagatgaaattctatagggtggaaatgtccaaaaagattaaaagcataatagaaaaactgcgccccttatgtgctaaggtctccacaattcttaaccttgagttgttagaatccaaccgtagaattgcccaggatattgctacgggtattactgctgcgtctgaggaacggggtccatggcctttcctcctagaaaaagcacaaataaccgacccataaccacaccagaaattcaggagccaaagtttttcggaaggaaggttgagatgggcaaaattctgcatgacatcacggagggtagtaacaaggatttaactgttcttcctattgttggtttaggaggttttgggaagacagctcttgcaaagcatatatacaaaaacgtcgataagcattttgacgtgaagatttggatatgtgctgtcaattattccagtgtttccagattgacaaaaaaataatggaatccatcccaccagtcaaaaatgaggaaagttgtagtccagaaatgttgactgaacaaaggttgaagtctaagaggtttttacttgtcttggatgatatgtggatttgtgataggaaggaagagtgggacagactattgagaccattgagaaaaggaaaggagggtaacataattctggtcacgagtcgatttccagcaatagcagaaacagttaaaacaactgatcatttaatagagctgaaaggtctaggctatgaagcatctaggagcttattcctagcatgcgtatatggagacaagcaatcggcaaatgaacataggggttagctgagattggaaacaagataatagaaaaactaaaaggcccccctcttgctgcaaaaactgtaggtaaattactaagtaacaatcttaatgtagagcattggacaagagtcctggatagtaaagaatgggaattactaaccggtgaagatgacattatgcctgtgttgaaacttagctacaaatatctccctttccacctacaacagtgtttttccctgtgtgctttatttcctaaaaagtacaagtttaatggtgaagagctcactaggttgtggataggactaggcattttacagtctagcagtaaaaccaaaagtattgaagaaataggaatggacaatttcaacgctttgataagccatggctttttcgaaaaagatgaaacggatggaaaatcttgttatgtcatccatgacctacaacatgatttagcattgatggttgcatcaaatgaatgccttagtatagatccttgcaatgtgaaatcagtagaaatctggccatctgtccgtcatttgtctatcaccagcaatgctgcagaatatgctgatgtaatggccaaagggaactttaggagggaactaaaaaaactgaagactagattggaagttcagaagttgcaaactttgatggtgtttggagaatttgatgaaagctttgcacgcagttttggttctttgttcagggaagcaaatgctctccgtgttctttgtttgcctaaaatctcacttcgtgtggagtccatcctacataatttttcatcacttattcatctacgctatctaatgcttgggaccaagtatacaagagatcaaatgcaattaccaagaacactctctagattttaccatttgatgatcctagatctgcaaacatgggatggtagttgtgatttgcctaaagacatgggaaaccttgcaaaattgcgccatatttttacagaaaaagacaaaattcatgctaatattcataatgtgagaaaactacaagtcttgcaagagttaaaaaaatattgtgtgaagaaggaagatggtggtcttcaactaaacaactcgggtatatgatcgagctaagggagttgggtatttataaccttgagaatacactcacaaaagcagcagcagtcaaagcaaaattgatggataaaaaatacttgcgcaagttgacattacattgggatgatgcacaacatcctgaacctgatgcgggagcaatggttattgaaagccttcaaccacacagtagttcccttcaagaattatgcattagagggcatggaggtctttgttgtccatcatggttgagtaatgagttctctgttaaagctctccggtctcttcatctagttggggtggcctggaaagttcttccatcatttaaccagatatgggagcttcacgagctaacattggagaatatagtcacaatacgtaagttcgttctggagcaatggtgttgtaagttaaaaaggctaacactgatcgacttagaggagttgacagaatggattactcaggactgtaatactttcttcccagatttgcaaaccttggaaattaaaaattgccctaatctcttggagctgccatttattgataatattggtgaccctcggaagaaagatgtgaatatgacttggtttccgaaattagaagagtttgaaatatctttgtgtatagaaatctcgtcatttccacctatcccttggactcaaactttggactatgtcagaataacagatgtgggatcaaatctaatggaggaattgaaatactctaaaacttcctctttgtctattactggcaataataacttgcacagtctagaaaaggtgttagtcttcaataatttaacagaattgcaagagttgtctatggagaaatgcccgcctttggatatggagtcccttctaatgctatcctcattgaagattttatctgtgagtggttcaggcagtttgttcgtgccgttaaccagtttgagtgatgccaaatggcagcttcctgttgaggaactttatatctcggattgtgttgccaatgggaaagagctatcacagctcctttctcatctcacaaagctctctgtgttatacatagggaatttcaagaggataacgcggttagatgtggcagtggagcagcagcagttgagaacactggtatcatctacagctatccatatcgagcatacacaaccagcagaacagcatgagggaattgcagaggaggctgaggtagaagatgatgggctccttctcctcgggtccaatctctgccgctctctccgggagctgacgatttacgactgcaaatgcctgagcctggcagctcctcatcctcttcttaatggtcacgagcctagaggtctccaagccctgggatccctccggacactaggaattttaaggtgccccaagttcctctctgagtactcacttgattctccttgttaccctttcccaacctccgtccaagtactcacttttcatggagcggtggacatgaagcacctctcaaacctcaccttcctcactcggttgtacatagaagattctgagaatttaaagtgcaaggaccttgcccaggaccaactcagtcaactagtcatctatcgctgccctgaattctttgtTGGttgggggcttgctcaacgttcatccaaactgcagatgctgtatacagatgacttcgaaggagtgcttgtgaagcccatctgcagtctcctctcttcctgtctcgtcgaactagtctttcattcgaacgacgaggtggagagcttcacaaagaagcaagaggaggcccttcagctcatcacctccctccaggaacttcgattccagagatgcaagaagctgcaatgccttcctgcagggttgcgtagacttaccagcctcaagagattaaggatcgaccaatgtccagccatccagtcactgcccaaggatggcctccccagttcacttcaagaactagacgtcacatactgcggcagcaaggatctcatacagcagtgcaggaagctgaagggaaccatccaaaaaatcatactacaacatgaggacgaccaataa More
CDS seq		atggattccaccgtgagagcggcgcggtgggtgctgagcaaggcgctgggccccgtgacggacggcttggtggaggcgtgggcggccagctcggagctcggccccaacgagctgcggcaggtcgcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacaagctgtaccacacctaccacgccgcggacgagcacgccagcggttgcgtctgcaaccttgtccagaatgctagccacactgccaaggctgtagctcgcaagctcaaatgctgcccgcgcacaggtgatgccaaacctgcaggtgaccccgacgacgagtcggaaggcgaccaagacggagatgctcgacacggaggagccatcagctgtgtttgcccaagcgtcaatatcggaattggacggcgaatcctctttggtgcctgctcattcatggcaccagaggaaaaacgcttcattgaagcacccaagatgaaattctatagggtggaaatgtccaaaaagattaaaagcataatagaaaaactgcgccccttatgtgctaaggtctccacaattcttaaccttgagttgttagaatccaaccgtagaattgcccaggatattgctacgggaggttttgggaagacagctcttgcaaagcatatatacaaaaacgtcgataagcattttgactgtttccagattgacaaaaaaataatggaatccatcccaccagtcaaaaatgaggaaagttgtagtccagaaatgttgactgaacaaaggttgaagtctaagaggtttttacttgtcttggatgatatgtggatttgtgataggaaggaagagtgggacagactattgagaccattgagaaaaggaaaggagggtaaattactaagtaacaatcttaatgtagagcattggacaagagtcctggatagtaaagaatgggaattactaaccggtgaagatgacattatgcctgtgttgaaacttagctacaaatatctccctttccacctacaacagtgtttttccctgtgtgctttatttcctaaaaagtacaagtttaatggtgaagagctcactaggttgtggataggactaggcattttacagtctagcagtaaaaccaaaagtattgaagaaataggaatggacaatttcaacgctttgataagccatggctttttcgaaaaagatgaaacggatggaaaatcttgttatgtcatccatgacctacaacatgatttagcattgatggttgcatcaaatgaatgccttagtatagatccttgcaatgtgaaatcagtagaaatctggccatctgtccgtcatttgtctatcaccagcaatgctgcagaatatgctgatgtaatggccaaagggaactttaggagggaactaaaaaaactgaagactagattggaagttcagaagttgcaaactttgatggtgtttggagaatttgatgaaagctttgcacgcagttttggttctttgttcagggaagcaaatgctctccgtgttctttgtttgcctaaaatctcacttcgtgtggagtccatcctacataatttttcatcacttattcatctacgctatctaatgcttgggaccaagtatacaagagatcaaatgcaattaccaagaacactctctagattttaccatttgatgatcctagatctgcaaacatgggatggtagttgtgatttgcctaaagacatgggaaaccttgcaaaattgcgccatatttttacagaaaaagacaaaattcatgctaatattcataatctaagggagttgggtatttataaccttgagaatacactcacaaaagcagcagcagtcaaagcaaaattgatggataaaaaatacttgcgcaagttgacattacattgggatgatgcacaacatcctgaacctgatgcgggagcaatggttattgaaagccttcaaccacacagtagttcccttcaagaattatgcattagagggcatggaggtctttgttgtccatcatggttgagtaatgagttctctgttaaagctctccggtctcttcatctagttggggtggcctggaaagttcttccatcatttaaccagatatgggagcttcacgagctaacattggagaatatagtcacaatacgtaagttcgttctggagcaatggtgttgtaagttaaaaaggctaacactgatcgacttagaggagttgacagaatggattactcaggactgtaatactttcttcccagatttgcaaaccttggaaattaaaaattgccctaatctcttggagctgccatttattgataatattggtgaccctcggaagaaagatgtgaatatgacttggtttccgaaattagaagagtttgaaatatctttgtgtatagaaatctcgtcatttccacctatcccttggactcaaactttggactatgtcagaataacagatgtgggatcaaatctaatggaggaattgaaatactctaaaacttcctctttgtctattactggcaataataacttgcacagtctagaaaaggtgttagtcttcaataatttaacagaattgcaagagttgtctatggagaaatgcccgcctttggatatggagtcccttctaatgctatcctcattgaagattttatctgtgagtggttcaggcagtttgttcgtgccgttaaccagtttgagtgatgccaaatggcagcttcctgttgaggaactttatatctcggattgtgttgccaatgggaaagagctatcacagctcctttctcatctcacaaagctctctgtgttatacatagggaatttcaagaggataacgcggttagatgtggcagtggagcagcagcagttgagaacactggtatcatctacagctatccatatcgagcatacacaaccagcagaacagcatgagggaattgcagaggaggctgaggtagaagatgatgggctccttctcctcgggtccaatctctgccgctctctccgggagctgacgatttacgactgcaaatgcctgagcctggcagctcctcatcctcttcttaatggtcacgagcctagaggtctccaagccctgggatccctccggacactaggaattttaaggtgccccaagttcctctctgagtactcacttgattctccttgttaccctttcccaacctccgtccaagtactcacttttcatggagcggtggacatgaagcacctctcaaacctcaccttcctcactcggttgtacatagaagattctgagaatttaaagtgcaaggaccttgcccaggaccaactcagtcaactagtcatctatcgctgccctgaattctttgtTGGttgggggcttgctcaacgttcatccaaactgcagatgctgtatacagatgacttcgaaggagtgcttgtgaagcccatctgcagtctcctctcttcctgtctcgtcgaactagtctttcattcgaacgacgaggtggagagcttcacaaagaagcaagaggaggcccttcagctcatcacctccctccaggaacttcgattccagagatgcaagaagctgcaatgccttcctgcagggttgcgtagacttaccagcctcaagagattaaggatcgaccaatgtccagccatccagtcactgcccaaggatggcctccccagttcacttcaagaactagacgtcacatactgcggcagcaaggatctcatacagcagtgcaggaagctgaagggaaccatccaaaaaatcatactacaacatgaggacgaccaataa More
Protein seq		MDSTVRAARWVLSKALGPVTDGLVEAWAASSELGPNELRQVAYNAEDVLDELDYFRIQDKLYHTYHAADEHASGCVCNLVQNASHTAKAVARKLKCCPRTGDAKPAGDPDDESEGDQDGDARHGGAISCVCPSVNIGIGRRILFGACSFMAPEEKRFIEAPKMKFYRVEMSKKIKSIIEKLRPLCAKVSTILNLELLESNRRIAQDIATGGFGKTALAKHIYKNVDKHFDCFQIDKKIMESIPPVKNEESCSPEMLTEQRLKSKRFLLVLDDMWICDRKEEWDRLLRPLRKGKEGKLLSNNLNVEHWTRVLDSKEWELLTGEDDIMPVLKLSYKYLPFHLQQCFSLCALFPKKYKFNGEELTRLWIGLGILQSSSKTKSIEEIGMDNFNALISHGFFEKDETDGKSCYVIHDLQHDLALMVASNECLSIDPCNVKSVEIWPSVRHLSITSNAAEYADVMAKGNFRRELKKLKTRLEVQKLQTLMVFGEFDESFARSFGSLFREANALRVLCLPKISLRVESILHNFSSLIHLRYLMLGTKYTRDQMQLPRTLSRFYHLMILDLQTWDGSCDLPKDMGNLAKLRHIFTEKDKIHANIHNLRELGIYNLENTLTKAAAVKAKLMDKKYLRKLTLHWDDAQHPEPDAGAMVIESLQPHSSSLQELCIRGHGGLCCPSWLSNEFSVKALRSLHLVGVAWKVLPSFNQIWELHELTLENIVTIRKFVLEQWCCKLKRLTLIDLEELTEWITQDCNTFFPDLQTLEIKNCPNLLELPFIDNIGDPRKKDVNMTWFPKLEEFEISLCIEISSFPPIPWTQTLDYVRITDVGSNLMEELKYSKTSSLSITGNNNLHSLEKVLVFNNLTELQELSMEKCPPLDMESLLMLSSLKILSVSGSGSLFVPLTSLSDAKWQLPVEELYISDCVANGKELSQLLSHLTKLSVLYIGNFKRITRLDVAVEQQQLRTLVSSTAIHIEHTQPAEQHEGIAEEAEVEDDGLLLLGSNLCRSLRELTIYDCKCLSLAAPHPLLNGHEPRGLQALGSLRTLGILRCPKFLSEYSLDSPCYPFPTSVQVLTFHGAVDMKHLSNLTFLTRLYIEDSENLKCKDLAQDQLSQLVIYRCPEFFVGWGLAQRSSKLQMLYTDDFEGVLVKPICSLLSSCLVELVFHSNDEVESFTKKQEEALQLITSLQELRFQRCKKLQCLPAGLRRLTSLKRLRIDQCPAIQSLPKDGLPSSLQELDVTYCGSKDLIQQCRKLKGTIQKIILQHEDDQ
Function		Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsPr106_04g0027840	OsPr106_04g0027840.01	Chr04	33322037	33326572	+	NAM
CDS seq	atggattccaccgtgagagcggcgcggtgggtgctgagcaaggcgctgggccccgtgacggacggcttggtggaggcgtgggcggccagctcggagctcggccccaacgagctgcggcaggtcgcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacaagctgtaccacacctaccacgccgcggacgagcacgccagcggttgcgtctgcaaccttgtccagaatgctagccacactgccaaggctgtagctcgcaagctcaaatgctgcccgcgcacaggtgatgccaaacctgcaggtgaccccgacgacgagtcggaaggcgaccaagacggagatgctcgacacggaggagccatcagctgtgtttgcccaagcgtcaatatcggaattggacggcgaatcctctttggtgcctgctcattcatggcaccagaggaaaaacgcttcattgaagcacccaagatgaaattctatagggtggaaatgtccaaaaagattaaaagcataatagaaaaactgcgccccttatgtgctaaggtctccacaattcttaaccttgagttgttagaatccaaccgtagaattgcccaggatattgctacgggaggttttgggaagacagctcttgcaaagcatatatacaaaaacgtcgataagcattttgactgtttccagattgacaaaaaaataatggaatccatcccaccagtcaaaaatgaggaaagttgtagtccagaaatgttgactgaacaaaggttgaagtctaagaggtttttacttgtcttggatgatatgtggatttgtgataggaaggaagagtgggacagactattgagaccattgagaaaaggaaaggagggtaaattactaagtaacaatcttaatgtagagcattggacaagagtcctggatagtaaagaatgggaattactaaccggtgaagatgacattatgcctgtgttgaaacttagctacaaatatctccctttccacctacaacagtgtttttccctgtgtgctttatttcctaaaaagtacaagtttaatggtgaagagctcactaggttgtggataggactaggcattttacagtctagcagtaaaaccaaaagtattgaagaaataggaatggacaatttcaacgctttgataagccatggctttttcgaaaaagatgaaacggatggaaaatcttgttatgtcatccatgacctacaacatgatttagcattgatggttgcatcaaatgaatgccttagtatagatccttgcaatgtgaaatcagtagaaatctggccatctgtccgtcatttgtctatcaccagcaatgctgcagaatatgctgatgtaatggccaaagggaactttaggagggaactaaaaaaactgaagactagattggaagttcagaagttgcaaactttgatggtgtttggagaatttgatgaaagctttgcacgcagttttggttctttgttcagggaagcaaatgctctccgtgttctttgtttgcctaaaatctcacttcgtgtggagtccatcctacataatttttcatcacttattcatctacgctatctaatgcttgggaccaagtatacaagagatcaaatgcaattaccaagaacactctctagattttaccatttgatgatcctagatctgcaaacatgggatggtagttgtgatttgcctaaagacatgggaaaccttgcaaaattgcgccatatttttacagaaaaagacaaaattcatgctaatattcataatctaagggagttgggtatttataaccttgagaatacactcacaaaagcagcagcagtcaaagcaaaattgatggataaaaaatacttgcgcaagttgacattacattgggatgatgcacaacatcctgaacctgatgcgggagcaatggttattgaaagccttcaaccacacagtagttcccttcaagaattatgcattagagggcatggaggtctttgttgtccatcatggttgagtaatgagttctctgttaaagctctccggtctcttcatctagttggggtggcctggaaagttcttccatcatttaaccagatatgggagcttcacgagctaacattggagaatatagtcacaatacgtaagttcgttctggagcaatggtgttgtaagttaaaaaggctaacactgatcgacttagaggagttgacagaatggattactcaggactgtaatactttcttcccagatttgcaaaccttggaaattaaaaattgccctaatctcttggagctgccatttattgataatattggtgaccctcggaagaaagatgtgaatatgacttggtttccgaaattagaagagtttgaaatatctttgtgtatagaaatctcgtcatttccacctatcccttggactcaaactttggactatgtcagaataacagatgtgggatcaaatctaatggaggaattgaaatactctaaaacttcctctttgtctattactggcaataataacttgcacagtctagaaaaggtgttagtcttcaataatttaacagaattgcaagagttgtctatggagaaatgcccgcctttggatatggagtcccttctaatgctatcctcattgaagattttatctgtgagtggttcaggcagtttgttcgtgccgttaaccagtttgagtgatgccaaatggcagcttcctgttgaggaactttatatctcggattgtgttgccaatgggaaagagctatcacagctcctttctcatctcacaaagctctctgtgttatacatagggaatttcaagaggataacgcggttagatgtggcagtggagcagcagcagttgagaacactggtatcatctacagctatccatatcgagcatacacaaccagcagaacagcatgagggaattgcagaggaggctgaggtagaagatgatgggctccttctcctcgggtccaatctctgccgctctctccgggagctgacgatttacgactgcaaatgcctgagcctggcagctcctcatcctcttcttaatggtcacgagcctagaggtctccaagccctgggatccctccggacactaggaattttaaggtgccccaagttcctctctgagtactcacttgattctccttgttaccctttcccaacctccgtccaagtactcacttttcatggagcggtggacatgaagcacctctcaaacctcaccttcctcactcggttgtacatagaagattctgagaatttaaagtgcaaggaccttgcccaggaccaactcagtcaactagtcatctatcgctgccctgaattctttgtTGGttgggggcttgctcaacgttcatccaaactgcagatgctgtatacagatgacttcgaaggagtgcttgtgaagcccatctgcagtctcctctcttcctgtctcgtcgaactagtctttcattcgaacgacgaggtggagagcttcacaaagaagcaagaggaggcccttcagctcatcacctccctccaggaacttcgattccagagatgcaagaagctgcaatgccttcctgcagggttgcgtagacttaccagcctcaagagattaaggatcgaccaatgtccagccatccagtcactgcccaaggatggcctccccagttcacttcaagaactagacgtcacatactgcggcagcaaggatctcatacagcagtgcaggaagctgaagggaaccatccaaaaaatcatactacaacatgaggacgaccaataa More
Protein seq	MDSTVRAARWVLSKALGPVTDGLVEAWAASSELGPNELRQVAYNAEDVLDELDYFRIQDKLYHTYHAADEHASGCVCNLVQNASHTAKAVARKLKCCPRTGDAKPAGDPDDESEGDQDGDARHGGAISCVCPSVNIGIGRRILFGACSFMAPEEKRFIEAPKMKFYRVEMSKKIKSIIEKLRPLCAKVSTILNLELLESNRRIAQDIATGGFGKTALAKHIYKNVDKHFDCFQIDKKIMESIPPVKNEESCSPEMLTEQRLKSKRFLLVLDDMWICDRKEEWDRLLRPLRKGKEGKLLSNNLNVEHWTRVLDSKEWELLTGEDDIMPVLKLSYKYLPFHLQQCFSLCALFPKKYKFNGEELTRLWIGLGILQSSSKTKSIEEIGMDNFNALISHGFFEKDETDGKSCYVIHDLQHDLALMVASNECLSIDPCNVKSVEIWPSVRHLSITSNAAEYADVMAKGNFRRELKKLKTRLEVQKLQTLMVFGEFDESFARSFGSLFREANALRVLCLPKISLRVESILHNFSSLIHLRYLMLGTKYTRDQMQLPRTLSRFYHLMILDLQTWDGSCDLPKDMGNLAKLRHIFTEKDKIHANIHNLRELGIYNLENTLTKAAAVKAKLMDKKYLRKLTLHWDDAQHPEPDAGAMVIESLQPHSSSLQELCIRGHGGLCCPSWLSNEFSVKALRSLHLVGVAWKVLPSFNQIWELHELTLENIVTIRKFVLEQWCCKLKRLTLIDLEELTEWITQDCNTFFPDLQTLEIKNCPNLLELPFIDNIGDPRKKDVNMTWFPKLEEFEISLCIEISSFPPIPWTQTLDYVRITDVGSNLMEELKYSKTSSLSITGNNNLHSLEKVLVFNNLTELQELSMEKCPPLDMESLLMLSSLKILSVSGSGSLFVPLTSLSDAKWQLPVEELYISDCVANGKELSQLLSHLTKLSVLYIGNFKRITRLDVAVEQQQLRTLVSSTAIHIEHTQPAEQHEGIAEEAEVEDDGLLLLGSNLCRSLRELTIYDCKCLSLAAPHPLLNGHEPRGLQALGSLRTLGILRCPKFLSEYSLDSPCYPFPTSVQVLTFHGAVDMKHLSNLTFLTRLYIEDSENLKCKDLAQDQLSQLVIYRCPEFFVGWGLAQRSSKLQMLYTDDFEGVLVKPICSLLSSCLVELVFHSNDEVESFTKKQEEALQLITSLQELRFQRCKKLQCLPAGLRRLTSLKRLRIDQCPAIQSLPKDGLPSSLQELDVTYCGSKDLIQQCRKLKGTIQKIILQHEDDQ More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.000000	0.000000	0.237586

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0626500	SBH	1.449855	1.839052	2.533673
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g53496	SBH	0.332108	0.119212	0.141505
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0626500	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0027400	SBH	0.000000	2.355760	0.389748
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0028180	SBH	0.076469	0.710213	0.600454
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0027910	SBH	0.0	1.822364	0.743104
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0027650	SBH	0.015902	0.079312	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0027890	RBH	0.000000	0.000000	0.000000
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0503000	SBH	1.1102425	2.785596	3.067995
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0026620	SBH	0.066260	0.133214	0.369819
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0507000	SBH	0.2745435	0.2969485	0.9896195
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0027010	SBH	0.000000	0.162403	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0026870	SBH	0.205462	1.451969	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0026910	SBH	1.587419	2.836581	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0027440	SBH	0.000000	0.000000	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0027550	SBH	0.406676	3.068031	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G026820	SBH	0.070433	1.553930	0.438373
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0026720	SBH	0.000000	5.324615	0.257449

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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