Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsPr106_03g0040690 | OGI:03098210 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr03:37563208-37564257 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | aggctaactacgtatcaacgaggtgaaagcatacttcttgtactagctagatgcctttcagtactgcatatgttatgtaggtgcatatatatggtgccctgacaagctaaggttctctgcctagttcgttacggctacaccaactgtcgtaacggtcaaagcaccaacgtacgtcatcatcggcggcggcggcatgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctgatctgatctgatcatcatcctccaacatttcagctctactagctcattgcattgctgcagagacctctcactcactgcttgtgttgcgattgatttttttttcttctttcttttttttgggtgaatacttgTGTtcatgattaattgtgcacggatgcgtgcgtctatgtacagttgcgttttaccttctcattgacttatttttctgttttgaattaattctgcttt
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CDS seq | atgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctga
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Protein seq | MCYESECCGGRGSYRNRRFALGFWFGLAILAAIAIIVVLAVGYGRVSSLRVAVDDASLTRFAVTATSVAYNLTVSLVVRNPNWAMGVTYRSLEASYLFHGKRFDGAAAVVSSGYEQAARKTEVFRLSSGSDAAPAALGSGGEREYRKESDNGGVFDVEVDLSGEVKYALHSAWCRVEARCPLKLQLPAAGSVAFQETTCDMLRSSQSGC |
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Function | NDR1/HIN1-like protein 3 [UniProtKB/Swiss-Prot:Q9FNH6] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsPr106_03g0040690 | OsPr106_03g0040690.01 | Chr03 | 37563208 | 37564257 | + | NAM | ||
CDS seq | atgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctga
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Protein seq | MCYESECCGGRGSYRNRRFALGFWFGLAILAAIAIIVVLAVGYGRVSSLRVAVDDASLTRFAVTATSVAYNLTVSLVVRNPNWAMGVTYRSLEASYLFHGKRFDGAAAVVSSGYEQAARKTEVFRLSSGSDAAPAALGSGGEREYRKESDNGGVFDVEVDLSGEVKYALHSAWCRVEARCPLKLQLPAAGSVAFQETTCDMLRSSQSGC
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0836400 | RBH | 0.0 | 0.098136 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g62020 | RBH | 0.0 | 0.066470 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os03g0836400 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041220 | RBH | 0.0 | 2.482622 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0040890 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0040960 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0041190 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0009010 | RBH | 0.0 | 8.508703 | 1.056487 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0599800 | RBH | 0.461052 | 0.634807 | 0.024531 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0040450 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0602400 | RBH | 0.6064095 | 0.694108 | 0.0815575 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0041030 | RBH | 0.0 | 0.114576 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0040940 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040620 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0040680 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0040740 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G040510 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0040210 | RBH | 0.0 | 0.0 | 0.0 |