Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_03g0040690 OGI:03098210 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr03:37563208-37564257
Gene Symbol -
DNA seq

aggctaactacgtatcaacgaggtgaaagcatacttcttgtactagctagatgcctttcagtactgcatatgttatgtaggtgcatatatatggtgccctgacaagctaaggttctctgcctagttcgttacggctacaccaactgtcgtaacggtcaaagcaccaacgtacgtcatcatcggcggcggcggcatgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctgatctgatctgatcatcatcctccaacatttcagctctactagctcattgcattgctgcagagacctctcactcactgcttgtgttgcgattgatttttttttcttctttcttttttttgggtgaatacttgTGTtcatgattaattgtgcacggatgcgtgcgtctatgtacagttgcgttttaccttctcattgacttatttttctgttttgaattaattctgcttt

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CDS seq

atgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctga

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Protein seq

MCYESECCGGRGSYRNRRFALGFWFGLAILAAIAIIVVLAVGYGRVSSLRVAVDDASLTRFAVTATSVAYNLTVSLVVRNPNWAMGVTYRSLEASYLFHGKRFDGAAAVVSSGYEQAARKTEVFRLSSGSDAAPAALGSGGEREYRKESDNGGVFDVEVDLSGEVKYALHSAWCRVEARCPLKLQLPAAGSVAFQETTCDMLRSSQSGC

Function NDR1/HIN1-like protein 3 [UniProtKB/Swiss-Prot:Q9FNH6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_03g0040690 OsPr106_03g0040690.01 Chr03 37563208 37564257 + NAM
CDS seq

atgtgctacgagtcggagtgctgcggcggccgcggctcgtaccggaaccgcaggttcgcgctcggcttctggttcggcctcgccatcctcgccgccatcgccatcatcgtcgtgctcgccgtcggctacggCcgcgtctccagcctcagggtcgccgtcgacgacgcctccctgacgcgcttcgcggtgaccgccacctccgtcgcctacaacctcaccgtctcgctcgtcgtccgcaaccccaactgggccatgggcgtcacctaccgctccctcgaggcgtcctacctcttccacggcaagcgcttcgacggcgccgccgccgtcgtctcctcgggatacgagcaggcggcgaggaagacggaggtgttccgcctctcgtccggctccgacgcggcgccggccgcgctggggagcggcggcgagagggagtaccgaaaggagagcgacaatggcggggtgttcgacgtcgaggtggacctgtccggcgaggtgaagtacgcgctgcacagcgcgtggtgcagggtggaggccaggtgcccgctcaagctgcagctccccgccgccggcagcgtcgccttccaggagaccacctgcgacatgctccGgtcgtcgcagagtggatgctga

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Protein seq

MCYESECCGGRGSYRNRRFALGFWFGLAILAAIAIIVVLAVGYGRVSSLRVAVDDASLTRFAVTATSVAYNLTVSLVVRNPNWAMGVTYRSLEASYLFHGKRFDGAAAVVSSGYEQAARKTEVFRLSSGSDAAPAALGSGGEREYRKESDNGGVFDVEVDLSGEVKYALHSAWCRVEARCPLKLQLPAAGSVAFQETTCDMLRSSQSGC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0836400 RBH 0.0 0.098136 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g62020 RBH 0.0 0.066470 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os03g0836400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0041220 RBH 0.0 2.482622 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0040890 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0040960 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0041190 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0009010 RBH 0.0 8.508703 1.056487
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0599800 RBH 0.461052 0.634807 0.024531
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0040450 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0602400 RBH 0.6064095 0.694108 0.0815575
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0041030 RBH 0.0 0.114576 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0040940 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0040620 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0040680 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0040740 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G040510 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0040210 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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