Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_03g0007210 OGI:03014240 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr03:5361801-5363143
Gene Symbol -
DNA seq

cacgacagagcgtatactggttttatcccaaggcagcgcggccagatggcttcgtccacggtgacattggagaagacgaccacaatccgtagcgaagccgttgtcgcggccgatgcggccgtggacagagcagcgacgttgaagtctcctctcctggaaggaaagaagtgcggcgacggtggcgttgcgaagcggtgctgcgagcgcaagtacgagctcgtcagctacgacgcgctcccggccttcctcaagcacaacgagttcatcatcgactactaccgcagcgagtggcccatcaagcaggcgctcctcagcgccttcgccgtccacaacgagaccgtcaacgtctggacgtaagcactcgatcgatcagagcacgtctggacctaagcacgcgagatggaacaggttgggtgctttgattgacaagcgtttcttgctgtatcttggcaggcatctgatcgggttcttcatgttcctcgcgctcaccgtgtgcgccgccacgatggttcccatggaatcttccgcgacgtccatgaccatggccaacaacaccggcaacccaatggtactgatgatgatgagctacggcagcaacggagcggccatggcagtgcaggctctgcgcaacgtgtccgtcgaatcggagctcgcggcggcggcgttgtcggcggcgggcgaccaggtcgcgcgttggccgttctacgcgtacctctgcggcgccatgttctgcctgctgatgagcagcgcgtgccacctgctggcctgccactcggagcacgccagctacgtgctgctccgcctcgactacgccggcatcacgggcctcatcgtcacctccttctacccgctcgtctactacaccttcctctgcgacccgttcttccgcacgctctacctcggcttcatcacgctcttcggcgccgccgcggtggccgtctcgctgatgccggtgttcgagaagcccgagctgcggtgggcgcgcgccggcctgttcgcgtgcatgggcatgtcaggactcgttccaatcgtgcacaagatgctcgtgttcggggcgcgcccggaggcggtgctcaccacgggctacgagatggtcatgggggcgttctacctcgccggcgtggtggtgtacgccaccagggtgccggagcggtggatgccggggaagttcgacctcgccggccacagccaccagctgttccacgtgctcgtcatcgccggcgcctacgcgcactacctggccggagtggtctacctcagctggagggacggggaagcttgctgaggcgttccaggatgctgcgctggcatcgtacaaaattgactacgtgtaccctttgttg

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CDS seq

atggcttcgtccacggtgacattggagaagacgaccacaatccgtagcgaagccgttgtcgcggccgatgcggccgtggacagagcagcgacgttgaagtctcctctcctggaaggaaagaagtgcggcgacggtggcgttgcgaagcggtgctgcgagcgcaagtacgagctcgtcagctacgacgcgctcccggccttcctcaagcacaacgagttcatcatcgactactaccgcagcgagtggcccatcaagcaggcgctcctcagcgccttcgccgtccacaacgagaccgtcaacgtctggacgcatctgatcgggttcttcatgttcctcgcgctcaccgtgtgcgccgccacgatggttcccatggaatcttccgcgacgtccatgaccatggccaacaacaccggcaacccaatggtactgatgatgatgagctacggcagcaacggagcggccatggcagtgcaggctctgcgcaacgtgtccgtcgaatcggagctcgcggcggcggcgttgtcggcggcgggcgaccaggtcgcgcgttggccgttctacgcgtacctctgcggcgccatgttctgcctgctgatgagcagcgcgtgccacctgctggcctgccactcggagcacgccagctacgtgctgctccgcctcgactacgccggcatcacgggcctcatcgtcacctccttctacccgctcgtctactacaccttcctctgcgacccgttcttccgcacgctctacctcggcttcatcacgctcttcggcgccgccgcggtggccgtctcgctgatgccggtgttcgagaagcccgagctgcggtgggcgcgcgccggcctgttcgcgtgcatgggcatgtcaggactcgttccaatcgtgcacaagatgctcgtgttcggggcgcgcccggaggcggtgctcaccacgggctacgagatggtcatgggggcgttctacctcgccggcgtggtggtgtacgccaccagggtgccggagcggtggatgccggggaagttcgacctcgccggccacagccaccagctgttccacgtgctcgtcatcgccggcgcctacgcgcactacctggccggagtggtctacctcagctggagggacggggaagcttgctga

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Protein seq

MASSTVTLEKTTTIRSEAVVAADAAVDRAATLKSPLLEGKKCGDGGVAKRCCERKYELVSYDALPAFLKHNEFIIDYYRSEWPIKQALLSAFAVHNETVNVWTHLIGFFMFLALTVCAATMVPMESSATSMTMANNTGNPMVLMMMSYGSNGAAMAVQALRNVSVESELAAAALSAAGDQVARWPFYAYLCGAMFCLLMSSACHLLACHSEHASYVLLRLDYAGITGLIVTSFYPLVYYTFLCDPFFRTLYLGFITLFGAAAVAVSLMPVFEKPELRWARAGLFACMGMSGLVPIVHKMLVFGARPEAVLTTGYEMVMGAFYLAGVVVYATRVPERWMPGKFDLAGHSHQLFHVLVIAGAYAHYLAGVVYLSWRDGEAC

Function Heptahelical transmembrane protein 4 [UniProtKB/Swiss-Prot:Q9SZG0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_03g0007210 OsPr106_03g0007210.01 Chr03 5361801 5363143 + NAM
CDS seq

atggcttcgtccacggtgacattggagaagacgaccacaatccgtagcgaagccgttgtcgcggccgatgcggccgtggacagagcagcgacgttgaagtctcctctcctggaaggaaagaagtgcggcgacggtggcgttgcgaagcggtgctgcgagcgcaagtacgagctcgtcagctacgacgcgctcccggccttcctcaagcacaacgagttcatcatcgactactaccgcagcgagtggcccatcaagcaggcgctcctcagcgccttcgccgtccacaacgagaccgtcaacgtctggacgcatctgatcgggttcttcatgttcctcgcgctcaccgtgtgcgccgccacgatggttcccatggaatcttccgcgacgtccatgaccatggccaacaacaccggcaacccaatggtactgatgatgatgagctacggcagcaacggagcggccatggcagtgcaggctctgcgcaacgtgtccgtcgaatcggagctcgcggcggcggcgttgtcggcggcgggcgaccaggtcgcgcgttggccgttctacgcgtacctctgcggcgccatgttctgcctgctgatgagcagcgcgtgccacctgctggcctgccactcggagcacgccagctacgtgctgctccgcctcgactacgccggcatcacgggcctcatcgtcacctccttctacccgctcgtctactacaccttcctctgcgacccgttcttccgcacgctctacctcggcttcatcacgctcttcggcgccgccgcggtggccgtctcgctgatgccggtgttcgagaagcccgagctgcggtgggcgcgcgccggcctgttcgcgtgcatgggcatgtcaggactcgttccaatcgtgcacaagatgctcgtgttcggggcgcgcccggaggcggtgctcaccacgggctacgagatggtcatgggggcgttctacctcgccggcgtggtggtgtacgccaccagggtgccggagcggtggatgccggggaagttcgacctcgccggccacagccaccagctgttccacgtgctcgtcatcgccggcgcctacgcgcactacctggccggagtggtctacctcagctggagggacggggaagcttgctga

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Protein seq

MASSTVTLEKTTTIRSEAVVAADAAVDRAATLKSPLLEGKKCGDGGVAKRCCERKYELVSYDALPAFLKHNEFIIDYYRSEWPIKQALLSAFAVHNETVNVWTHLIGFFMFLALTVCAATMVPMESSATSMTMANNTGNPMVLMMMSYGSNGAAMAVQALRNVSVESELAAAALSAAGDQVARWPFYAYLCGAMFCLLMSSACHLLACHSEHASYVLLRLDYAGITGLIVTSFYPLVYYTFLCDPFFRTLYLGFITLFGAAAVAVSLMPVFEKPELRWARAGLFACMGMSGLVPIVHKMLVFGARPEAVLTTGYEMVMGAFYLAGVVVYATRVPERWMPGKFDLAGHSHQLFHVLVIAGAYAHYLAGVVYLSWRDGEAC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0200000 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g10300 RBH 0.0 0.0 0.204604
Nipponbare | IRGSP 1.0 | RAP-db Os03g0200000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0007320 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0007290 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0007340 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0007330 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0014300 RBH 0.0 2.033005 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0088300 RBH 0.025651 0.15602 0.033004
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0007130 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0088700 RBH 0.050451 0.3225905 0.048066
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0007170 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0007230 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0007210 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0007230 RBH 0.0 0.000000 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0007200 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G007230 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0007040 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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