Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsPr106_02g0008460 | OGI:02001240 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:6252029-6255545 | ||||||||
Gene Symbol | RLCK65, OsRLCK65 | ||||||||||
DNA seq | tcacactatttttcctccactggaaagatcaagaaattcttgcttgatggagtgtatttcagtggaaacctgcgccatacctaaccggtctttcggtgatgccatcgagcacatgagggccaacttaaccagtgggaggacacaactttgcatcatttcggagtttccaccatccaaatcattgtgtagcatattggggtctaaaatctcggttactctgtggggaaatgcggtatcaacaagttcatggaggctcctaccatctttgaatttttcatcagttggacgctttccagttaatatctctaacaacagcactccatagctatagacatcacccctcgtggatatttgcgcacccattccatactctgcattttcatttgaaaacataacaaaggtgaatggagaaaaatatgattcacaaagttaataaaatgattgaagcatacaagtaaagaataagtataggtttccaatttctctcacccggtgcaatatatccaatggatccttttaggtcagccaaacttgtagagttaccaggtgctgctgttgaattagcacacataaatcttgccaacccaaagtcactgacatatgcagtcatttcaagatccaaaagaacattgcttggcttcatgtcacaatgtattagtggggatacacactggttgtgaagataatctaaagcgtatgcgatgtccagggctacgttaatcctttcacccaaagttaggaatctttgcttaccatgcccatggtcctctggatgtagccacatttctagactcccattaggcatatactgaaagacaagtgctttaaaatcatagccatttggatcaactgtagagcataatgtaatgattttgacaagatttcgatggcgaatatatcttaatgcctcacactccgcattgaagcttgtgggtgctccgtacttgttgagattgaaaaccttaatagcaactggattgtcctcaaatgtcagaaggcccttgtaaacagccccaaaggatcccaaaccaaccaaatttgtggcagagaacccatctgttgctttggcaatatcttcatatgatattttccttaagttcacactggagtgctgctggtttggttcttcttttcttctcttcatgagaacaatagttaaacataacaatgaaattacaacagcagacactacgattggaattactattttcaaaacagtagacttgcttttaatttgtgatcctgattcagggcaaaggggcaggctgtaccctggagcattcgcacacaacctgtagtttccgtccaagataaccctgctagcattaccaaatacaccatttgatggtattgtcccttcaaagtcattgaatgaaaggttgagtttctgcaaagaactaaaaagtgtgaggaactctggaacttttcctgacaatctgttacgagagagatccaactccttgatgctttttaagttcatgaaagattgtggaatgcttccagtaagaaggttcccttccatgtgaaggtattccaaaagcacacatttccctagagtagacggtatatcgccggtcaagcgattgtttgcaatactgatgcttccaaggtttatgaggttgccaatttctggcagtatgggcccagtaaacagattatgtgacaaatccaaattttgtgacagtgaagaaattttaaagacctcacttggcatgcttccactgaatgaattgtgagagaggttaagcttctctaattgtctccactgccctatatttgcaggtatactcccgttgaggttgtttctatctagataaaactcgtttagttgggaaaggttaccaatggaatctggaatacggccagagaggttgttttttgcaaagcttagaaccagtaaatttgtaagatttccaatggtttgtgggatcctcccactaaacatattgtcatccatatacagaatagtgagactcttaaggttaccaatctctgcgggaattgtcccagaaagtttgttttgcttgagccacaaccagtcgagctgtggggcaagattaccaaccgagctaggcaaacttcctttgagactgttcccatccaagagtaattttttcagttgggtgcagtttgcaagggatgagaggaagctccagtcacctgcttcgagatggttgtacgccagatcaagatatctcaagtttggcaataacccaaaggatggcactaccccggtgagcccagtagcaacaagataaatcatttctagtttggtcatattggcaagagaagctgggatcggcccgtttaactgtattgttgataggatcaagctttgaaggttaggaagcctgttgcctatatcttgtggtagtcggccgatgagtgagttattggccatttcaagatatctcaaagatgacatgttgaaaatagactctggcacaggaccagacaacttgttgtatgtgagaattagcctctctaaggctgggattttacttaggctctcagggatgctacccaccaagttattagctgctagagaaagacgaacaagggaagaaaggttgcccagtgtgggcggtatccctcctgtgagtttattctgtgttagactaaggaattgaataggtgcagcaattgctgtaacaggtggtatagaaccagctaaattgttacggttgaggtaaatggttgtcaatgtggagctgttgaagagggctggtgggatctcccctgtaagactattttgcatgagcctaagcacttgaagggatgagctatttgccaagaactccgggattcctcctgtgagctgattgcctccaagatcaacatatacaaaagacgggctactgcccaacaatggtggtatctcacctgtgagggcgttgttggagagatccaaagttttcagctcacgaagcgtcccaaatccggtgggtatactgccttcaagcttgttgttgtatagtataacttgctggaggtgagtgcattgggttaagcttggtggtatctcaccttggagggagttgttccataagccgagtacctggagattgctgcatgaggacagctcatctggaatacggcctacaagagagttgatgctcaggttcaggtagctgatttgtcccaagcgcccgagctcacttggaatttttccaaggaacgcgttgcttgataagtcgaggcttgcgatggagctcagattgccgatgcaaggtggtattgaaccaccgaggcctttggagctgacgttgagtgccatgactcggagttgggtctgtgtgttgttgcatgaaacaccctgccaattgcagaagttttgggttgtattggtccatgagcttaaggctccattaggatcagagatttgagacttgaagcagagcagggcttctctatcagtatcagtatcatcactgatcgctaatggcagggagcatgagatgaagaagatagccaagagtggaatgagttttgggcagggagcaaataagcggatcat
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CDS seq | atgatccgcttatttgctccctgcccaaaactcattccactcttggctatcttcttcatctcatgctccctgccattagcgatcagtgatgatactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatcctaatggagccttaagctcatggaccaatacaacccaaaacttctgcaattggcagggtgtttcatgcaacaacacacagacccaactccgagtcatggcactcaacgtcagctccaaaggcctcggtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagcaacgcgttccttggaaaaattccaagtgagctcgggcgcttgggacaaatcagctacctgaacctgagcatcaactctcttgtaggccgtattccagatgagctgtcctcatgcagcaatctccaggtactcggcttatggaacaactccctccaaggtgagataccaccaagcttaacccaatgcactcacctccagcaagttatactatacaacaacaagcttgaaggcagtatacccaccggatttgggacgcttcgtgagctgaaaactttggatctctccaacaacgccctcacaggtgagataccaccattgttgggcagtagcccgtcttttgtatatgttgatcttggaggcaatcagctcacaggaggaatcccggagttcttggcaaatagctcatcccttcaagtgcttaggctcatgcaaaatagtcttacaggggagatcccaccagccctcttcaacagctccacattgacaaccatttacctcaaccgtaacaatttagctggttctataccacctgttacagcaattgctgcacctattcaattccttagtctaacacagaataaactcacaggagggataccgcccacactgggcaacctttcttcccttgttcgtctttctctagcagctaataacttggtgggtagcatccctgagagcctaagtaaaatcccagccttagagaggctaattctcacatacaacaagttgtctggtcctgtgccagagtctattttcaacatgtcatctttgagatatcttgaaatggccaataactcactcatcggccgactaccacaagatataggcaacaggcttcctaaccttcaaagcttgatcctatcaacaatacagttaaacgggccgatcccagcttctcttgccaatatgaccaaactagaaatgatttatcttgttgctactgggctcaccggggtagtgccatcctttgggttattgccaaacttgagatatcttgatctggcgtacaaccatctcgaagcaggtgactggagcttcctctcatcccttgcaaactgcacccaactgaaaaaattactcttggatgggaacagtctcaaaggaagtttgcctagctcggttggtaatcttgccccacagctcgactggttgtggctcaagcaaaacaaactttctgggacaattcccgcagagattggtaaccttaagagtctcactattctgtatatggatgacaatatgtttagtgggaggatcccacaaaccattggaaatcttacaaatttactggttctaagctttgcaaaaaacaacctctctggccgtattccagattccattggtaacctttcccaactaaacgagttttatctagatagaaacaacctcaacgggagtatacctgcaaatatagggcagtggagacaattagagaagcttaacctctctcacaattcattcagtggaagcatgccaagtgaggtctttaaaatttcttcactgtcacaaaatttggatttgtcacataatctgtttactgggcccatactgccagaaattggcaacctcataaaccttggaagcatcagtattgcaaacaatcgcttgaccggcgatataccgtctactctagggaaatgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagttggatctctctcgtaacagattgtcaggaaaagttccagagttcctcacactttttagttctttgcagaaactcaacctttcattcaatgactttgaagggacaataccatcaaatggtgtatttggtaatgctagcagggttatcttggacggaaactacaggttgtgtgcgaatgctccagggtacagcctgcccctttgccctgaatcaggatcacaaattaaaagcaagtctactgttttgaaaatagtaattccaatcgtagtgtctgctgttgtaatttcattgttatgtttaactattgttctcatgaagagaagaaaagaagaaccaaaccagcagcactccagtgtgaacttaaggaaaatatcatatgaagatattgccaaagcaacagatgggttctctgccacaaatttggttggtttgggatcctttggggctgtttacaagggccttctgacatttgaggacaatccagttgctattaaggttttcaatctcaacaagtacggagcacccacaagcttcaatgcggagtgtgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattacattatgctctacagttgatccaaatggctatgattttaaagcacttgtctttcagtatatgcctaatgggagtctagaaatgtggctacatccagaggaccatgggcatggtaagcaaagattcctaactttgggtgaaaggattaacgtagccctggacatcgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatgaagccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgtgtgctaattcaacagcagcacctggtaactctacaagtttggctgacctaaaaggatccattggatatattgcaccggagtatggaatgggtgcgcaaatatccacgaggggtgatgtctatagctatggagtgctgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaaagatggtaggagcctccatgaacttgttgataccgcatttccccacagagtaaccgagattttagaccccaatatgctacacaatgatttggatggtggaaactccgaaatgatgcaaagttgtgtcctcccactggttaagttggccctcatgtgctcgatggcatcaccgaaagaccggttaggtatggcgcaggtttccactgaaatacactccatcaagcaagaatttcttgatctttccagtggaggaaaaatagtgtga
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Protein seq | MIRLFAPCPKLIPLLAIFFISCSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTTQNFCNWQGVSCNNTQTQLRVMALNVSSKGLGGSIPPCIGNLSSIASLDLSSNAFLGKIPSELGRLGQISYLNLSINSLVGRIPDELSSCSNLQVLGLWNNSLQGEIPPSLTQCTHLQQVILYNNKLEGSIPTGFGTLRELKTLDLSNNALTGEIPPLLGSSPSFVYVDLGGNQLTGGIPEFLANSSSLQVLRLMQNSLTGEIPPALFNSSTLTTIYLNRNNLAGSIPPVTAIAAPIQFLSLTQNKLTGGIPPTLGNLSSLVRLSLAANNLVGSIPESLSKIPALERLILTYNKLSGPVPESIFNMSSLRYLEMANNSLIGRLPQDIGNRLPNLQSLILSTIQLNGPIPASLANMTKLEMIYLVATGLTGVVPSFGLLPNLRYLDLAYNHLEAGDWSFLSSLANCTQLKKLLLDGNSLKGSLPSSVGNLAPQLDWLWLKQNKLSGTIPAEIGNLKSLTILYMDDNMFSGRIPQTIGNLTNLLVLSFAKNNLSGRIPDSIGNLSQLNEFYLDRNNLNGSIPANIGQWRQLEKLNLSHNSFSGSMPSEVFKISSLSQNLDLSHNLFTGPILPEIGNLINLGSISIANNRLTGDIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNRLSGKVPEFLTLFSSLQKLNLSFNDFEGTIPSNGVFGNASRVILDGNYRLCANAPGYSLPLCPESGSQIKSKSTVLKIVIPIVVSAVVISLLCLTIVLMKRRKEEPNQQHSSVNLRKISYEDIAKATDGFSATNLVGLGSFGAVYKGLLTFEDNPVAIKVFNLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTVDPNGYDFKALVFQYMPNGSLEMWLHPEDHGHGKQRFLTLGERINVALDIAYALDYLHNQCVSPLIHCDMKPSNVLLDLEMTAYVSDFGLARFMCANSTAAPGNSTSLADLKGSIGYIAPEYGMGAQISTRGDVYSYGVLLLEILTGKRPTDEKFKDGRSLHELVDTAFPHRVTEILDPNMLHNDLDGGNSEMMQSCVLPLVKLALMCSMASPKDRLGMAQVSTEIHSIKQEFLDLSSGGKIV |
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Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsPr106_02g0008460 | OsPr106_02g0008460.01 | Chr02 | 6252029 | 6255545 | - | NAM | ||
CDS seq | atgatccgcttatttgctccctgcccaaaactcattccactcttggctatcttcttcatctcatgctccctgccattagcgatcagtgatgatactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatcctaatggagccttaagctcatggaccaatacaacccaaaacttctgcaattggcagggtgtttcatgcaacaacacacagacccaactccgagtcatggcactcaacgtcagctccaaaggcctcggtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagcaacgcgttccttggaaaaattccaagtgagctcgggcgcttgggacaaatcagctacctgaacctgagcatcaactctcttgtaggccgtattccagatgagctgtcctcatgcagcaatctccaggtactcggcttatggaacaactccctccaaggtgagataccaccaagcttaacccaatgcactcacctccagcaagttatactatacaacaacaagcttgaaggcagtatacccaccggatttgggacgcttcgtgagctgaaaactttggatctctccaacaacgccctcacaggtgagataccaccattgttgggcagtagcccgtcttttgtatatgttgatcttggaggcaatcagctcacaggaggaatcccggagttcttggcaaatagctcatcccttcaagtgcttaggctcatgcaaaatagtcttacaggggagatcccaccagccctcttcaacagctccacattgacaaccatttacctcaaccgtaacaatttagctggttctataccacctgttacagcaattgctgcacctattcaattccttagtctaacacagaataaactcacaggagggataccgcccacactgggcaacctttcttcccttgttcgtctttctctagcagctaataacttggtgggtagcatccctgagagcctaagtaaaatcccagccttagagaggctaattctcacatacaacaagttgtctggtcctgtgccagagtctattttcaacatgtcatctttgagatatcttgaaatggccaataactcactcatcggccgactaccacaagatataggcaacaggcttcctaaccttcaaagcttgatcctatcaacaatacagttaaacgggccgatcccagcttctcttgccaatatgaccaaactagaaatgatttatcttgttgctactgggctcaccggggtagtgccatcctttgggttattgccaaacttgagatatcttgatctggcgtacaaccatctcgaagcaggtgactggagcttcctctcatcccttgcaaactgcacccaactgaaaaaattactcttggatgggaacagtctcaaaggaagtttgcctagctcggttggtaatcttgccccacagctcgactggttgtggctcaagcaaaacaaactttctgggacaattcccgcagagattggtaaccttaagagtctcactattctgtatatggatgacaatatgtttagtgggaggatcccacaaaccattggaaatcttacaaatttactggttctaagctttgcaaaaaacaacctctctggccgtattccagattccattggtaacctttcccaactaaacgagttttatctagatagaaacaacctcaacgggagtatacctgcaaatatagggcagtggagacaattagagaagcttaacctctctcacaattcattcagtggaagcatgccaagtgaggtctttaaaatttcttcactgtcacaaaatttggatttgtcacataatctgtttactgggcccatactgccagaaattggcaacctcataaaccttggaagcatcagtattgcaaacaatcgcttgaccggcgatataccgtctactctagggaaatgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagttggatctctctcgtaacagattgtcaggaaaagttccagagttcctcacactttttagttctttgcagaaactcaacctttcattcaatgactttgaagggacaataccatcaaatggtgtatttggtaatgctagcagggttatcttggacggaaactacaggttgtgtgcgaatgctccagggtacagcctgcccctttgccctgaatcaggatcacaaattaaaagcaagtctactgttttgaaaatagtaattccaatcgtagtgtctgctgttgtaatttcattgttatgtttaactattgttctcatgaagagaagaaaagaagaaccaaaccagcagcactccagtgtgaacttaaggaaaatatcatatgaagatattgccaaagcaacagatgggttctctgccacaaatttggttggtttgggatcctttggggctgtttacaagggccttctgacatttgaggacaatccagttgctattaaggttttcaatctcaacaagtacggagcacccacaagcttcaatgcggagtgtgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattacattatgctctacagttgatccaaatggctatgattttaaagcacttgtctttcagtatatgcctaatgggagtctagaaatgtggctacatccagaggaccatgggcatggtaagcaaagattcctaactttgggtgaaaggattaacgtagccctggacatcgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatgaagccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgtgtgctaattcaacagcagcacctggtaactctacaagtttggctgacctaaaaggatccattggatatattgcaccggagtatggaatgggtgcgcaaatatccacgaggggtgatgtctatagctatggagtgctgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaaagatggtaggagcctccatgaacttgttgataccgcatttccccacagagtaaccgagattttagaccccaatatgctacacaatgatttggatggtggaaactccgaaatgatgcaaagttgtgtcctcccactggttaagttggccctcatgtgctcgatggcatcaccgaaagaccggttaggtatggcgcaggtttccactgaaatacactccatcaagcaagaatttcttgatctttccagtggaggaaaaatagtgtga
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Protein seq | MIRLFAPCPKLIPLLAIFFISCSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTTQNFCNWQGVSCNNTQTQLRVMALNVSSKGLGGSIPPCIGNLSSIASLDLSSNAFLGKIPSELGRLGQISYLNLSINSLVGRIPDELSSCSNLQVLGLWNNSLQGEIPPSLTQCTHLQQVILYNNKLEGSIPTGFGTLRELKTLDLSNNALTGEIPPLLGSSPSFVYVDLGGNQLTGGIPEFLANSSSLQVLRLMQNSLTGEIPPALFNSSTLTTIYLNRNNLAGSIPPVTAIAAPIQFLSLTQNKLTGGIPPTLGNLSSLVRLSLAANNLVGSIPESLSKIPALERLILTYNKLSGPVPESIFNMSSLRYLEMANNSLIGRLPQDIGNRLPNLQSLILSTIQLNGPIPASLANMTKLEMIYLVATGLTGVVPSFGLLPNLRYLDLAYNHLEAGDWSFLSSLANCTQLKKLLLDGNSLKGSLPSSVGNLAPQLDWLWLKQNKLSGTIPAEIGNLKSLTILYMDDNMFSGRIPQTIGNLTNLLVLSFAKNNLSGRIPDSIGNLSQLNEFYLDRNNLNGSIPANIGQWRQLEKLNLSHNSFSGSMPSEVFKISSLSQNLDLSHNLFTGPILPEIGNLINLGSISIANNRLTGDIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNRLSGKVPEFLTLFSSLQKLNLSFNDFEGTIPSNGVFGNASRVILDGNYRLCANAPGYSLPLCPESGSQIKSKSTVLKIVIPIVVSAVVISLLCLTIVLMKRRKEEPNQQHSSVNLRKISYEDIAKATDGFSATNLVGLGSFGAVYKGLLTFEDNPVAIKVFNLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTVDPNGYDFKALVFQYMPNGSLEMWLHPEDHGHGKQRFLTLGERINVALDIAYALDYLHNQCVSPLIHCDMKPSNVLLDLEMTAYVSDFGLARFMCANSTAAPGNSTSLADLKGSIGYIAPEYGMGAQISTRGDVYSYGVLLLEILTGKRPTDEKFKDGRSLHELVDTAFPHRVTEILDPNMLHNDLDGGNSEMMQSCVLPLVKLALMCSMASPKDRLGMAQVSTEIHSIKQEFLDLSSGGKIV
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 1.015919 | 0.827276 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211800 | RBH | 0.720620 | 0.353773 | 0.376538 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12030 | RBH | 0.452912 | 0.221141 | 0.090084 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211800 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008530 | SBH | 0.000000 | 0.0 | 0.584907 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008630 | SBH | 0.0 | 0.0 | 0.188894 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008430 | SBH | 0.369193 | 0.439994 | 0.324075 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008360 | SBH | 0.0 | 0.011065 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008440 | RBH | 0.446222 | 6.642202 | 2.918477 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0104200 | SBH | 0.5143795 | 1.7940075 | 0.4215545 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008300 | RBH | 0.0 | 0.094379 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0109200 | RBH | 0.037638 | 1.008661 | 0.1829405 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008750 | SBH | 0.030803 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008390 | RBH | 0.053663 | 0.747537 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008700 | RBH | 0.0 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008670 | RBH | 0.0 | 0.064783 | 0.135457 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008440 | RBH | 0.0 | 0.901031 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008580 | RBH | 0.0 | 0.0 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008560 | RBH | 0.0 | 1.657690 | 0.0 |