Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsPr106_01g0003950		OGI:01010180 \| 16/16			PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)			Chr01:3038809-3043184		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		OsCrRLK1L4
DNA seq		agtattaattccagtcagccatgaattcccttttgttttcagagtacaggacactgactgcatttcttttcataccctcgagaggaaaaggccaccatgcttccgatttctaacacaaaagtctcaagaaaaaacgagtcttgagagaaaacgagttgtagcacaaggttttctccctttcttctccttgtgtttgtgtgtgagcttctcaaaacacgtgagccgtgagctcctcgtttggatatatacgttctttggtttagtttctattgactgtcttctacctttcttctatctggtgttctcttatgttgtactagctgttccggacaaggaaaaactgaagcttttgcagagcttcctgcaaaggtactacttccttttccgaattctgccactttgttctcctgaatggattttttttggtaattttttatgtagtttttttggctacttttgatggagcatagctaaatttctgcctaaacctgtgattgtttaagttagattgttcgaaatttgagcgctcggtacatcaatttaaatgcccttgtttttgtgctgaaaaaagagagtaatattctgtgggtttctccagtattgttgtgaaactgaaccctgaattcgtctatggctttgaaactgaactatgaactcgtactgatgtgatcaatctcaatctcatgtggaagtactaactgaagatttatctttctcatgatttgatctttaggtactcatcatcaattgtgccatccaaattgaagttcaaatttccactgccaagatgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccccggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccgccggcggcggcgaggggcaacgcgtcgacgacgacgacgacgccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgcggacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatcgagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgagggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgctgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcactgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggcgccgaccggccggcgatggaggacgtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatgatactgatcagtcatcttcaaacattccaggtcatgaattagtcatcttcagactggtcagttcatcgttgaacattccaggtcaaaattcacctctccagtatccagtcggaaaaagtgaacaaagacatacttagaatttaaaatatacttaccagtgaaaattttgtactgtccctacaatggagttcaaacatatgcttgaatgaaagacatgcgagtctcataatttatgtttgagcagaaatactacacagttcaaacttttgcctaccttctggaagcaggtactggatggggccggacagcaagactgcaaggcctaattagcatccatacaaaaatattagcaagagcaagcaatagccgatatgttccagaaaccgcggtgggccgcaaattccattttatgcagttcggagtacaaccaacagatggcatggtctatcaacttatgaaaggcgtcaataacaaataggatacagatccactcaaatcccaacaggttcatagatatgactaaaatctccaacaggtttaaattgattcataaactttaagactgatacatcccctaacatctcatttaaggggatgtgcttcctctcattcaaggggatgcgcttcctctaggcgaggcccgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgtactcatgtcacggcgctcatggtcagcagggctacggctgtcagctctcattgggctcctgctgtcccttggtgcaggactcctgctggcattaggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggctatcacgagggcttcccctagggctctgggtgtcgcgagggctcccc More
CDS seq		atgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccccggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccgccggcggcggcgaggggcaacgcgtcgacgacgacgacgacgccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgcggacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatcgagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgagggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgctgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcactgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggcgccgaccggccggcgatggaggacgtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga More
Protein seq		MIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPPAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELRTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATARATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR
Function		Receptor-like protein kinase HERK 1 [UniProtKB/Swiss-Prot:Q9LX66]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsPr106_01g0003950	OsPr106_01g0003950.01	Chr01	3038809	3042427	+	NAM
CDS seq	atgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccccggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccgccggcggcggcgaggggcaacgcgtcgacgacgacgacgacgccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgcggacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatcgagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgagggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgctgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcactgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggcgccgaccggccggcgatggaggacgtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga More
Protein seq	MIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPPAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELRTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATARATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsPr106_01g0003950	OsPr106_01g0003950.02	Chr01	3038868	3043184	+	NAM
CDS seq	atgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccccggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccgccggcggcggcgaggggcaacgcgtcgacgacgacgacgacgccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgcggacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatcgagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgagggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgctgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcactgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggcgccgaccggccggcgatggaggacgtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga More
Protein seq	MIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPPAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELRTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATARATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	11.735553	0.000000	1.391277

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0155500	RBH	4.076645	2.979870	1.119626
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g06280	RBH	2.578371	1.850388	0.078421
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0155500	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0004100	RBH	1.170875	1.305654	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0003860	RBH	0.690556	0.537870	0.079522
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0004100	RBH	3.420771	1.111675	0.329595
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0003690	RBH	0.474525	0.031962	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0003910	RBH	0.0	0.0	0.0
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0051800	RBH	5.829902	9.9626855	0.6622305
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0003910	RBH	0.763570	0.079959	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0053100	RBH	4.9526495	8.208037	1.2112105
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0003710	RBH	0.857571	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0003820	RBH	1.465293	0.753189	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0003970	RBH	7.958033	5.923308	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0003940	RBH	0.465638	0.000000	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0003870	RBH	0.251175	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G003930	RBH	0.547635	0.230182	0.088792
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0003800	RBH	3.779473	0.986286	0.964564

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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