Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0003800 | OGI:01010180 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:2959778-2964095 | ||||||||
| Gene Symbol | OsCrRLK1L4 | ||||||||||
| DNA seq | atgaccgcactgctgctccaagaaaaatctctgaagtttgtagtatcttgcaataataacacggcatcagtttctgagtgtatcttgtcagtattaattccagtcagccatgaattcccttttgttttcagagtacaggacactgactgcatttcttttcataccctcgagaggaaaaggccaccatgcttccgatttctaacacaaaagtctcaagaaaaaacgagtcttgagagaaaacgagttgtagcacaaggttttctccctttcttctccttgtgtttgtgtgtgagcttctcaaaacacgtgagccgtgagctcctcgtttggatatatacgttctttggtttagtttctattgactgtcttctacctttcttctatctggtgttctcttatgttgtactagctgtttcggacaaggaaaaactgaagcttttccagagcttcctgcaaaggtactacttccttttccgaattctgccactttgttctcctgaatggatttttttggtaattttttatggagtttttttggctactttttatggagcatagctaaatttctgcctaaacctgtgAttgtttaagttagattgttcgaaatttgagcgctcggtacatcaatttaaatgcccttgtttttgtgctgAaaaaagagagtaatatattctgtgggtttctccagtattgttgtgaaactgaaccctgaattcgtctatggctttgaaactgaactatgaactcgtactgatgtgatcaatctcaatctcatgtggaagtactaactgaagatttatctttcTcatgatttgatctttaggtactcatcatcaattgtgccatccaaattgaagttcaaatttccactgccaagatgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccctggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccggcggcggcggcgaggggcaacgcgtcgacgacgacgacgactccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgccgacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatagagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgacggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgccgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcgctgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggtgccgaccggccggcgatggaggaCGtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatgatactgatcagtcatcttcaaacattccaggtcatgaattagtcatcttcagactggtcagttcattgttgaacattccaggtcaaaattcacctctccagtatccagtcggaaaaagtgaacaaagacatacttagaatttaaaatatacttaccagtgaaaattttgtactgtccctacaatggagttcaaacatatgcttgaatgaaagacatgcgagtctcataatttatgtttgagcagaaatactacacagttcaaacttttgcctaccttctggaagcaggtactggatggggccggacagcaagactgcaaggcctaattagcatccatacaaaaatattagcaagagcaagcaatagccgatatgttccagaaaccgcggtgggccgcaaattccattttatgcagttcggagtacaaccAAcagatggcatggtctatcaacttatgaaaggcgtcaataacaaataggatacagatccactcaaatcccaacaggttcatagatatgactaaaatctccaacaggtttaaattgattcataaacttagactgatacatCccctaacatctcatttaaggggatgtgcttcctctcattcaaggggatgcgcttcctctaggcgaggcccgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgtactcatgtcacggcgctcatggtcagcagggctacggctgtcagctctcattg
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| CDS seq | atgaccgcactgctgctccaagaaaaatctctgaagtttgtagtatcttgcaataataacacggcatcagtttctgagtgtatcttgtcagtattaattccagtcagccatgaattcccttttgttttcagagtacaggacactgactgcatttcttttcataccctcgagaggaaaaggccaccatgcttccgatttctaacacaaaagtctcaagaaaaaacgagtcttgagagaaaacgagttgtagcacaaggttttctccctttcttctccttgtgtttgtgtgtgagcttctcaaaacacgtgagccgtgagctcctcgtttggatatatacgttctttggtttagtttctattgactgtcttctacctttcttctatctggtgttctcttatgttgtactagctgtttcggacaaggaaaaactgaagcttttccagagcttcctgcaaaggtactacttccttttccgaattctgccactttgttctcctgaatggatttttttggtactcatcatcaattgtgccatccaaattgaagttcaaatttccactgccaagatgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccctggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccggcggcggcggcgaggggcaacgcgtcgacgacgacgacgactccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgccgacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatagagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgacggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgccgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcgctgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggtgccgaccggccggcgatggaggaCGtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga
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| Protein seq | MTALLLQEKSLKFVVSCNNNTASVSECILSVLIPVSHEFPFVFRVQDTDCISFHTLERKRPPCFRFLTQKSQEKTSLERKRVVAQGFLPFFSLCLCVSFSKHVSRELLVWIYTFFGLVSIDCLLPFFYLVFSYVVLAVSDKEKLKLFQSFLQRYYFLFRILPLCSPEWIFLVLIINCAIQIEVQISTAKMIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPAAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELPTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATATATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR |
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| Function | Receptor-like protein kinase HERK 1 [UniProtKB/Swiss-Prot:Q9LX66] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0003800 | OsNaBo_01g0003800.02 | Chr01 | 2959867 | 2963486 | + | NAM | ||
| CDS seq | atgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccctggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccggcggcggcggcgaggggcaacgcgtcgacgacgacgacgactccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgccgacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatagagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgacggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgccgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcgctgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggtgccgaccggccggcgatggaggaCGtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga
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| Protein seq | MIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPAAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELPTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATATATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0003800 | OsNaBo_01g0003800.01 | Chr01 | 2959778 | 2964095 | + | NAM | ||
| CDS seq | atgaccgcactgctgctccaagaaaaatctctgaagtttgtagtatcttgcaataataacacggcatcagtttctgagtgtatcttgtcagtattaattccagtcagccatgaattcccttttgttttcagagtacaggacactgactgcatttcttttcataccctcgagaggaaaaggccaccatgcttccgatttctaacacaaaagtctcaagaaaaaacgagtcttgagagaaaacgagttgtagcacaaggttttctccctttcttctccttgtgtttgtgtgtgagcttctcaaaacacgtgagccgtgagctcctcgtttggatatatacgttctttggtttagtttctattgactgtcttctacctttcttctatctggtgttctcttatgttgtactagctgtttcggacaaggaaaaactgaagcttttccagagcttcctgcaaaggtactacttccttttccgaattctgccactttgttctcctgaatggatttttttggtactcatcatcaattgtgccatccaaattgaagttcaaatttccactgccaagatgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccctggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccggcggcggcggcgaggggcaacgcgtcgacgacgacgacgactccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgccgacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatagagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgacggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgccgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcgctgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggtgccgaccggccggcgatggaggaCGtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga
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| Protein seq | MTALLLQEKSLKFVVSCNNNTASVSECILSVLIPVSHEFPFVFRVQDTDCISFHTLERKRPPCFRFLTQKSQEKTSLERKRVVAQGFLPFFSLCLCVSFSKHVSRELLVWIYTFFGLVSIDCLLPFFYLVFSYVVLAVSDKEKLKLFQSFLQRYYFLFRILPLCSPEWIFLVLIINCAIQIEVQISTAKMIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPAAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELPTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATATATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0003800 | OsNaBo_01g0003800.03 | Chr01 | 2959926 | 2963486 | + | NAM | ||
| CDS seq | atgatcaaactccggtcagctctaggcgttcttgagatcttgtcagttctttgcatcagccttgttgctgcatacactccagtagacaactacctcatcagctgcggctcatcggtcgacacgccggttggccagcggctgttcgtcgccgacgactcgggcacggtcgtcctgacatctccggcgagtgacgcggtgaaagcctcgcccagcgcggtgtccgggttgcgcgacgacgccgccatgtaccagagcgccagggtgttcaaggcgccgtcgtcctactcgttccggatcagggaccctggccgccacttcgtccgcctccacttcttccccttcgtgtacctcggctacgacctcgccacggcgagcttcaaggtgtcgacgcaggacgccgtcctgctcgacggcttcgcgccggcggcggcggcgaggggcaacgcgtcgacgacgacgacgactccggcggcggcggtgtgcgaggagttcctgctcgacgtggcgcgcgacacgctggtcgtcacgttcgtgccgctcgccggcaggctcgcgttcgtcaacgccatcgaggtcgtatcggtccccgacgacctcatcggcgctgctgactcgtcgctgtcgacgtccgactccactggccagcagctcaaccctgccgtgatgccgctgcaaacggtctatcgagtcaatgtgggcggccccgcggtggcgcccgagagcgacacgctctggcgagaatggaccatcgagcaaccattcttggtctccactgttaccactgcagtgactaaaaaagtttcttacaatcgaacactcaactacctggcagggcaagcgacggcggacgacgcgccggccatcgtctacgccaccggcagggagcttatcatcatgaacggctcggtgttcgacggcatgaaacagatggcgtggcagttcgacgtcgacgggtcggcgagctacctgatcaggttccacttctgtgacatcgtgagcagcgtgcctggccgcctccacatgaacgcctatgtcgacagctccaacgcgattcaagatctcgacctctccgccattggcaatggcacgctggcgttcccgtattacagagacttcgtgctggctgctagcactccatccggcaagctcgccgtctacgttgggtcgacgtcgcagaagatcacgacacctgccgccattctcaatggcctagagatcatgaggatactcacgaccgccggcaacgtcgccgtcgtcgagccaacgacgccgccgggaacgaagaagaagaacaatttggccgtcgttcttggctcagtctgtggagctttcggtttcgtttccgtcgccgctgctcttgtcattgttcttaggaggaaagaggagaaggaggagctgccgacgccgacgacgagccagccgtcgacggcatggatgccgctcctcggccggatcagcttccgcagcgcgccgccgagcgccgtcgggtcacggtcgcccagcttcaccattgacaccaacgccaacactccaggaggaggcgccactcccggcatggccgcggcggcctcgtcgtccccgagctaccgcttcccgttcgccgcgctgcaggacgcgacgggcaacttcgacgagggcctcgtcatcggcgagggcgggttcgggaaggtgtacgccgccgtgctccaggacggcaccaaggtcgccgtgaagcgcgcgaacccggagtcgcggcagggcgcgcgggagttccgcacggagatagagatgctctccggcctgcgccaccgccacctcgtctccctcatcggctactgcgacgagcaggatgagatgatcctgctctacgagtacatggagcacggctcgctgcggagccgcctgtacggcggcggcgcggcgacggcgacggcgacggcgctcagctgggcgcagcggctggaggcatgcgccggcgcggcgagggggctcctctacctgcacacggccaccgccaagccggtgatccaccgcgacgtcaagtcgtcgaacatcttgctcgacgacggcctcacggcgaaggtcgccgacttcggcctctccaaggccgggccggacatggacgagacgcacgtcagcacggcggtgaaggggagcttcggctacgtggacccggagtacgtgaggacgaggaagctcaccgccaagtccgacgtctactcgttcggcgtcgtgctcctcgaggcgctgtgcgcgcgccccgtcgtcgacccgaggctgcccaagccgatggtgaacctcgtcgagtgggggttgcactggcagcggagggacgagctggagaagatcgtcgaccggcggatcgccgggacggtgaggcccgccgcgctgaggaagtacggcgagacggtggccaggtgcctcgccgaccgcggtgccgaccggccggcgatggaggaCGtcgtgtggagcctgcagttcgtggcgcggctgcaggaggtggacggcctcgacgcctccgacgtgagcagcctcaacatggttcatcagctgatgccgccgacgagcttgcacgctcgtcagagaagcgccggcgaaagcgagaccggcaggacggacgccgacgaggacagcagtgtggtagatgatgattacaccgatgcttccatgagaggaatcttctggcaaatggtcaatgtgcgcgggagatga
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| Protein seq | MIKLRSALGVLEILSVLCISLVAAYTPVDNYLISCGSSVDTPVGQRLFVADDSGTVVLTSPASDAVKASPSAVSGLRDDAAMYQSARVFKAPSSYSFRIRDPGRHFVRLHFFPFVYLGYDLATASFKVSTQDAVLLDGFAPAAAARGNASTTTTTPAAAVCEEFLLDVARDTLVVTFVPLAGRLAFVNAIEVVSVPDDLIGAADSSLSTSDSTGQQLNPAVMPLQTVYRVNVGGPAVAPESDTLWREWTIEQPFLVSTVTTAVTKKVSYNRTLNYLAGQATADDAPAIVYATGRELIIMNGSVFDGMKQMAWQFDVDGSASYLIRFHFCDIVSSVPGRLHMNAYVDSSNAIQDLDLSAIGNGTLAFPYYRDFVLAASTPSGKLAVYVGSTSQKITTPAAILNGLEIMRILTTAGNVAVVEPTTPPGTKKKNNLAVVLGSVCGAFGFVSVAAALVIVLRRKEEKEELPTPTTSQPSTAWMPLLGRISFRSAPPSAVGSRSPSFTIDTNANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKVAVKRANPESRQGAREFRTEIEMLSGLRHRHLVSLIGYCDEQDEMILLYEYMEHGSLRSRLYGGGAATATATALSWAQRLEACAGAARGLLYLHTATAKPVIHRDVKSSNILLDDGLTAKVADFGLSKAGPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKPMVNLVEWGLHWQRRDELEKIVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDVSSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr01 | 2960235 | 2960601 | + | OsNaBo_01g0003800.01 | OsNaBo_01g0003800.01,OsNaBo_01g0003800.02,OsNaBo_01g0003800.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.779473 | 0.986286 | 0.964564 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0155500 | RBH | 4.076645 | 2.979870 | 1.119626 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g06280 | RBH | 2.578371 | 1.850388 | 0.078421 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0155500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0004100 | RBH | 1.170875 | 1.305654 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0003860 | RBH | 0.690556 | 0.537870 | 0.079522 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0004100 | RBH | 3.420771 | 1.111675 | 0.329595 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0003690 | RBH | 0.474525 | 0.031962 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0003950 | RBH | 11.735553 | 0.000000 | 1.391277 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0051800 | RBH | 5.829902 | 9.9626855 | 0.6622305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0003910 | RBH | 0.763570 | 0.079959 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0053100 | RBH | 4.9526495 | 8.208037 | 1.2112105 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0003710 | RBH | 0.857571 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0003820 | RBH | 1.465293 | 0.753189 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0003970 | RBH | 7.958033 | 5.923308 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0003940 | RBH | 0.465638 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0003870 | RBH | 0.251175 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G003930 | RBH | 0.547635 | 0.230182 | 0.088792 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0003760 | RBH | 0.0 | 0.0 | 0.0 |
