Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0553500 | OGI:11061260 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:20589041-20591080 | ||||||||
| Gene Symbol | WAK116, OsWAK116, OsRLCK332, RLCK332 | ||||||||||
| DNA seq | CTATAATGACTTCCTCCATGCATATGTATGTGCATCGTGGTCTTCTACGGCCGAATCGAAGTTCTGACTTCTGAGCAACTCAAGGCGTTCTGCCACTTCCGCCATTGTTGGCCTTCCATCTTCTTCCGGGCTCACACACCTCACTGCCATCCTTCCCATCTCCTCAAGTATGGCCATCCTATCCTCTTGATCTCCTGTGATGGACAGATGGAACATTCTCTCTCCACTATCTTCTGCCTCATAAGCTTGGATGAATTCAGAAACAAAGTTGTGATCTTTAGGCATTCTCCCTCTGATGAGTACCATCAGAATGACACCAAAGCTGTACACGAAACTTTCGTTCTTTGCAATCCCGGTTTGCATGTAAACCGGGTCATTGCAGCGAGTCATCCTCAATACAGGAACGATATGATCCTTGTCCTTGGTAATGCTTCTCGAGGAAAGAAAGCATGAAACCATTGGCATGAAATTTTCATCCAACAGTACATCGTAAGGTGTGAGAGGTCCATGTACGATGCCTCCAACTGTTGAAGAATGGATGTGTGCCAGTGCTTCTGAAGTCTCAGATGCAATCTTCAGGCGTAATGGTAGCGAGAAATATCCAGGCTGATGATGTACAATGTCAGAGAGACTCCCCTTAGCAGTGTACTCATGCACTAAAATTGGAATATTAGCCTCCAAGCAACAGCCCAACAGTTTGACCATGTTCTTGTGGGAGATGTGAGACAAGATCATCATTTCCATGAGAAAACAATTTTTGAGGCTCTCATCTCCATCATAAGGCGTCTTTACTGTGACCAACGTATTGTCCTCGAGAATTCCTCTGTGGTACTCTGCTAAACCGTCTTTAAGAAGTAAACAGGAATAATCCATTGTAAATTTCTTTAGTTCTTTCTTTGTGAAAATTCTTACAGCACCAAGCTTTTCCAGTAACTTAGAATTGCCACTATTATGTTTGAAAATGGCGAAACTCTTCTTCTTCTTCTTCTTAGGGTGCTTGGTCGAACCATAGCTGGCATTCCTTGTGCTTTGCTTGTATTTTTCAAACAAATCTTGTGTTACCGAGAAGGATCGCCAAAGGGTTGTATTATCATGTCCTCCATTGCGATATTCTCTAAGCTTCCGAAGGTGTTCAGCCACAATGTTCATCTTTGGACGTTTCTTCATGTCCATTGCTAGGCACTTTGTTGCTAATTTTCCTATTTGATTGATAATCTTCATGTTACTGACGGATGCTATATTTGCATCAAAAAGATCCTTCATCCGTTTTCCTTCTGAATCATGTTCGGTGAAACTTGTAATGAGGCTAACTTTTCCTTCCTCTTTTATCCTCTTTCTAGTAATTAATTCTAGTAGAACTGCTCCAAAACTATAAACATCGTTCTTCGACGATTGTGTCCCGTCTCTAAATAGTATAGGATCCATGTAATCTATGCTCCCTTTTACATTTTTAGTGTGCCGAGTTTTACCTCCGTAGAGAAACCTTGATATTCCAAAATCTGATATTTTTGCATCAAGATTGTCATCCAGTAGTATATTTGAAGGCTTGATATCCCCATGAACAATAGGGGTATACATTGAAGAATGCATATAGCCTAATGCTTCTGCACACTGTATAGCAATACACAATCTTGTGTCCAAAGATATGGGAGTATCACTTTGATGAAGGATGTCATGCAGGCTCCCTTTGGATACATACTCTGTGACCACCATTAGAGCATTATTTTGCTCTATGCTATAACCTACAAGCCTAACCACATTTTTATGGTTGACTTGGCTGTGGGCGATTACTTCTTTAGCTAAGTCTTCCATGGAATCCTCAAATATGTATCTCTTCACTGCGACTACACGGTTATCATCAAGAACTCCTTTGTAAACTTGTCCAAATCCACCTTTTCCAATAACAGTACTATAGTTGTCAGTAATTCTCTTAATCTCATCTTCTGTGAATTTTGTGATATTGTGATTGCTGTCCGCTATCCACTTTGCCCTGTCATCGCCTTGGATGAAATCCCCAAGCTTACTTTCTGGAACTTCCAT
More
|
||||||||||
| CDS seq | ATGGAAGTTCCAGAAAGTAAGCTTGGGGATTTCATCCAAGGCGATGACAGGGCAAAGTGGATAGCGGACAGCAATCACAATATCACAAAATTCACAGAAGATGAGATTAAGAGAATTACTGACAACTATAGTACTGTTATTGGAAAAGGTGGATTTGGACAAGTTTACAAAGGAGTTCTTGATGATAACCGTGTAGTCGCAGTGAAGAGATACATATTTGAGGATTCCATGGAAGACTTAGCTAAAGAAGTAATCGCCCACAGCCAAGTCAACCATAAAAATGTGGTTAGGCTTGTAGGTTATAGCATAGAGCAAAATAATGCTCTAATGGTGGTCACAGAGTATGTATCCAAAGGGAGCCTGCATGACATCCTTCATCAAAGTGATACTCCCATATCTTTGGACACAAGATTGTGTATTGCTATACAGTGTGCAGAAGCATTAGGCTATATGCATTCTTCAATGTATACCCCTATTGTTCATGGGGATATCAAGCCTTCAAATATACTACTGGATGACAATCTTGATGCAAAAATATCAGATTTTGGAATATCAAGGTTTCTCTACGGAGGTAAAACTCGGCACACTAAAAATGTAAAAGGGAGCATAGATTACATGGATCCTATACTATTTAGAGACGGGACACAATCGTCGAAGAACGATGTTTATAGTTTTGGAGCAGTTCTACTAGAATTAATTACTAGAAAGAGGATAAAAGAGGAAGGAAAAGTTAGCCTCATTACAAGTTTCACCGAACATGATTCAGAAGGAAAACGGATGAAGGATCTTTTTGATGCAAATATAGCATCCGTCAGTAACATGAAGATTATCAATCAAATAGGAAAATTAGCAACAAAGTGCCTAGCAATGGACATGAAGAAACGTCCAAAGATGAACATTGTGGCTGAACACCTTCGGAAGCTTAGAGAATATCGCAATGGAGGACATGATAATACAACCCTTTGGCGATCCTTCTCGGTAACACAAGATTTGTTTGAAAAATACAAGCAAAGCACAAGGAATGCCAGCTATGGTTCGACCAAGCACCCTAAGAAGAAGAAGAAGAAGAGTTTCGCCATTTTCAAACATAATAGTGGCAATTCTAAGTTACTGGAAAAGCTTGGTGCTGTAAGAATTTTCACAAAGAAAGAACTAAAGAAATTTACAATGGATTATTCCTGTTTACTTCTTAAAGACGGTTTAGCAGAGTACCACAGAGGAATTCTCGAGGACAATACGTTGGTCACAGTAAAGACGCCTTATGATGGAGATGAGAGCCTCAAAAATTGTTTTCTCATGGAAATGATGATCTTGTCTCACATCTCCCACAAGAACATGGTCAAACTGTTGGGCTGTTGCTTGGAGGCTAATATTCCAATTTTAGTGCATGAGTACACTGCTAAGGGGAGTCTCTCTGACATTGTACATCATCAGCCTGGATATTTCTCGCTACCATTACGCCTGAAGATTGCATCTGAGACTTCAGAAGCACTGGCACACATCCATTCTTCAACAGTTGGAGGCATCGTACATGGACCTCTCACACCTTACGATGTACTGTTGGATGAAAATTTCATGCCAATGGTTTCATGCTTTCTTTCCTCGAGAAGCATTACCAAGGACAAGGATCATATCGTTCCTGTATTGAGGATGACTCGCTGCAATGACCCGGTTTACATGCAAACCGGGATTGCAAAGAACGAAAGTTTCGTGTACAGCTTTGGTGTCATTCTGATGGTACTCATCAGAGGGAGAATGCCTAAAGATCACAACTTTGTTTCTGAATTCATCCAAGCTTATGAGGCAGAAGATAGTGGAGAGAGAATGTTCCATCTGTCCATCACAGGAGATCAAGAGGATAGGATGGCCATACTTGAGGAGATGGGAAGGATGGCAGTGAGGTGTGTGAGCCCGGAAGAAGATGGAAGGCCAACAATGGCGGAAGTGGCAGAACGCCTTGAGTTGCTCAGAAGTCAGAACTTCGATTCGGCCGTAGAAGACCACGATGCACATACATATGCATGGAGGAAGTCATTATAG
More
|
||||||||||
| Protein seq | MEVPESKLGDFIQGDDRAKWIADSNHNITKFTEDEIKRITDNYSTVIGKGGFGQVYKGVLDDNRVVAVKRYIFEDSMEDLAKEVIAHSQVNHKNVVRLVGYSIEQNNALMVVTEYVSKGSLHDILHQSDTPISLDTRLCIAIQCAEALGYMHSSMYTPIVHGDIKPSNILLDDNLDAKISDFGISRFLYGGKTRHTKNVKGSIDYMDPILFRDGTQSSKNDVYSFGAVLLELITRKRIKEEGKVSLITSFTEHDSEGKRMKDLFDANIASVSNMKIINQIGKLATKCLAMDMKKRPKMNIVAEHLRKLREYRNGGHDNTTLWRSFSVTQDLFEKYKQSTRNASYGSTKHPKKKKKKSFAIFKHNSGNSKLLEKLGAVRIFTKKELKKFTMDYSCLLLKDGLAEYHRGILEDNTLVTVKTPYDGDESLKNCFLMEMMILSHISHKNMVKLLGCCLEANIPILVHEYTAKGSLSDIVHHQPGYFSLPLRLKIASETSEALAHIHSSTVGGIVHGPLTPYDVLLDENFMPMVSCFLSSRSITKDKDHIVPVLRMTRCNDPVYMQTGIAKNESFVYSFGVILMVLIRGRMPKDHNFVSEFIQAYEAEDSGERMFHLSITGDQEDRMAILEEMGRMAVRCVSPEEDGRPTMAEVAERLELLRSQNFDSAVEDHDAHTYAWRKSL |
||||||||||
| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0553500 | OsNip_11t0553500-00 | Chr11 | 20589041 | 20591080 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAAGTTCCAGAAAGTAAGCTTGGGGATTTCATCCAAGGCGATGACAGGGCAAAGTGGATAGCGGACAGCAATCACAATATCACAAAATTCACAGAAGATGAGATTAAGAGAATTACTGACAACTATAGTACTGTTATTGGAAAAGGTGGATTTGGACAAGTTTACAAAGGAGTTCTTGATGATAACCGTGTAGTCGCAGTGAAGAGATACATATTTGAGGATTCCATGGAAGACTTAGCTAAAGAAGTAATCGCCCACAGCCAAGTCAACCATAAAAATGTGGTTAGGCTTGTAGGTTATAGCATAGAGCAAAATAATGCTCTAATGGTGGTCACAGAGTATGTATCCAAAGGGAGCCTGCATGACATCCTTCATCAAAGTGATACTCCCATATCTTTGGACACAAGATTGTGTATTGCTATACAGTGTGCAGAAGCATTAGGCTATATGCATTCTTCAATGTATACCCCTATTGTTCATGGGGATATCAAGCCTTCAAATATACTACTGGATGACAATCTTGATGCAAAAATATCAGATTTTGGAATATCAAGGTTTCTCTACGGAGGTAAAACTCGGCACACTAAAAATGTAAAAGGGAGCATAGATTACATGGATCCTATACTATTTAGAGACGGGACACAATCGTCGAAGAACGATGTTTATAGTTTTGGAGCAGTTCTACTAGAATTAATTACTAGAAAGAGGATAAAAGAGGAAGGAAAAGTTAGCCTCATTACAAGTTTCACCGAACATGATTCAGAAGGAAAACGGATGAAGGATCTTTTTGATGCAAATATAGCATCCGTCAGTAACATGAAGATTATCAATCAAATAGGAAAATTAGCAACAAAGTGCCTAGCAATGGACATGAAGAAACGTCCAAAGATGAACATTGTGGCTGAACACCTTCGGAAGCTTAGAGAATATCGCAATGGAGGACATGATAATACAACCCTTTGGCGATCCTTCTCGGTAACACAAGATTTGTTTGAAAAATACAAGCAAAGCACAAGGAATGCCAGCTATGGTTCGACCAAGCACCCTAAGAAGAAGAAGAAGAAGAGTTTCGCCATTTTCAAACATAATAGTGGCAATTCTAAGTTACTGGAAAAGCTTGGTGCTGTAAGAATTTTCACAAAGAAAGAACTAAAGAAATTTACAATGGATTATTCCTGTTTACTTCTTAAAGACGGTTTAGCAGAGTACCACAGAGGAATTCTCGAGGACAATACGTTGGTCACAGTAAAGACGCCTTATGATGGAGATGAGAGCCTCAAAAATTGTTTTCTCATGGAAATGATGATCTTGTCTCACATCTCCCACAAGAACATGGTCAAACTGTTGGGCTGTTGCTTGGAGGCTAATATTCCAATTTTAGTGCATGAGTACACTGCTAAGGGGAGTCTCTCTGACATTGTACATCATCAGCCTGGATATTTCTCGCTACCATTACGCCTGAAGATTGCATCTGAGACTTCAGAAGCACTGGCACACATCCATTCTTCAACAGTTGGAGGCATCGTACATGGACCTCTCACACCTTACGATGTACTGTTGGATGAAAATTTCATGCCAATGGTTTCATGCTTTCTTTCCTCGAGAAGCATTACCAAGGACAAGGATCATATCGTTCCTGTATTGAGGATGACTCGCTGCAATGACCCGGTTTACATGCAAACCGGGATTGCAAAGAACGAAAGTTTCGTGTACAGCTTTGGTGTCATTCTGATGGTACTCATCAGAGGGAGAATGCCTAAAGATCACAACTTTGTTTCTGAATTCATCCAAGCTTATGAGGCAGAAGATAGTGGAGAGAGAATGTTCCATCTGTCCATCACAGGAGATCAAGAGGATAGGATGGCCATACTTGAGGAGATGGGAAGGATGGCAGTGAGGTGTGTGAGCCCGGAAGAAGATGGAAGGCCAACAATGGCGGAAGTGGCAGAACGCCTTGAGTTGCTCAGAAGTCAGAACTTCGATTCGGCCGTAGAAGACCACGATGCACATACATATGCATGGAGGAAGTCATTATAG
More
|
|||||||
| Protein seq | MEVPESKLGDFIQGDDRAKWIADSNHNITKFTEDEIKRITDNYSTVIGKGGFGQVYKGVLDDNRVVAVKRYIFEDSMEDLAKEVIAHSQVNHKNVVRLVGYSIEQNNALMVVTEYVSKGSLHDILHQSDTPISLDTRLCIAIQCAEALGYMHSSMYTPIVHGDIKPSNILLDDNLDAKISDFGISRFLYGGKTRHTKNVKGSIDYMDPILFRDGTQSSKNDVYSFGAVLLELITRKRIKEEGKVSLITSFTEHDSEGKRMKDLFDANIASVSNMKIINQIGKLATKCLAMDMKKRPKMNIVAEHLRKLREYRNGGHDNTTLWRSFSVTQDLFEKYKQSTRNASYGSTKHPKKKKKKSFAIFKHNSGNSKLLEKLGAVRIFTKKELKKFTMDYSCLLLKDGLAEYHRGILEDNTLVTVKTPYDGDESLKNCFLMEMMILSHISHKNMVKLLGCCLEANIPILVHEYTAKGSLSDIVHHQPGYFSLPLRLKIASETSEALAHIHSSTVGGIVHGPLTPYDVLLDENFMPMVSCFLSSRSITKDKDHIVPVLRMTRCNDPVYMQTGIAKNESFVYSFGVILMVLIRGRMPKDHNFVSEFIQAYEAEDSGERMFHLSITGDQEDRMAILEEMGRMAVRCVSPEEDGRPTMAEVAERLELLRSQNFDSAVEDHDAHTYAWRKSL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0555600 | SBH | 0.780068 | 0.145547 | 1.248361 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35120 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0553500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017200 | RBH | 0.0 | 3.037357 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017280 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017140 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016780 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017070 | RBH | 0.460573 | 2.667517 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0323000 | RBH | 0.2550705 | 4.101181 | 0.550854 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017560 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0332100 | RBH | 0.044573 | 0.112561 | 0.109374 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017410 | RBH | 0.0 | 0.046933 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016950 | RBH | 0.922729 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016820 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016990 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016930 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017270 | RBH | 0.0 | 0.0 | 0.0 |
