Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0555600 | OGI:11061380 | 10/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:20651030-20657181 | ||||||||
| Gene Symbol | RLCK331, OsRLCK331, WAK117, OsWAK117, WAK118, OsWAK118, OsRLCK333, RLCK333, WAK119, OsWAK119, OsRLCK335, RLCK335 | ||||||||||
| DNA seq | GATGACAACAGACAAAACAATACGACAACGGCTTACAAAACCAACAACCAAAAATAGTCCATATAGTCTTATATATATGGTGACAAACTGCCAATAGAGAATACAGTATGTTATATAACACAGTTAACAACCAAACAGTACACACTATGTTTCTGATGATACTCTGTAAACGATCTCTCAGGTGAAAGACTGAAAGGGAACAATCAGTTGTGGCCCATCAGTTGGCTTCATCTTCGGTTTCAGCGATGCCAACAGCCTTCTATAGCTTCTGCTTCAGTTAGCATCTCGCTGCTCCCATGGCTGAGCTCTCCTTCATTCTCCTGATCATCTTAAGGCGTTCAGCCACTTCCTTCATCGTCGGCCTTCCGTCGATTTCCAAGCTGACGCACTCCATTGCCAGCCTCCCAATCTCTTCAAGGACAGCGATATCTTCTTCAGCCATGATCCCTTCATCAAACATTGCCTTCCCACTCTTGGCTGTCTCGTAAGCTCTGATGAATTCAGGGATGAGTCGACGATTGTTGTCATGACAATGATATACAGGTTTCTTCCTGCTGATGAGTTCAAAGAGAACGACACCGAAGCTGTACACATCGTTTTTTACCGTGAAATGCCCAGACTGAATATGAATCGGGTCCATGTAGTGTATATGCGTGAATTCCATAGACGCGACCTGATCATTGTTGTTTTCAGCAATCCTCCTTGATGAAGTAAAACCTGCAACCTTTGGCATTAAGTTACTGTCAAGAAGTATATTGCTTGGCTTGATATTACCATGTCGGATGACACAAAATGCTGAGGAGTGAAGGAATTCTAATGCTTCTGCAGTTTTTACTGCAATCTTCAGACGTAACTCTAGTGGGAAATCTTCTTTAGAGTACAGAATGTCATTGAGGCTCCCTTTAGCAGCATACTCATATATGAGAATAGGAAGATGATCAGCATCGGAACAATGACCCAAAAGTTTGATGATGTACCTGTGGGCGATTTTAGACATGATGGTTATGCTAGTGCTAATACTGTTTCTTAGATCCTCATCATAAGAAAACACAGAATAAGTTTTCACTGCCACCAACGTATTGTCATCTAGTATTCCTTTATAGACATTACAAAATGTACTTTTACCAAGAAGATGAGAGGAGTTATTTGTGATCACACTGATATCTTTCTTTGTGAAAATTCTAACATCATTACTCCTGAAAATACCAAAATTGTGCTTCTGAGGATTTGAAATTATACTAGAGCTGAAAATGCCGGCGCTTTGCATACCTTTCTTCAATGCATCATGTACTTTATCCAAAGTGGATTCCCAAGCTGGTTTTTCATGTCCACCATTCCGGACTTGAAAAATCCAAGTCCGAAGGTGTTCAGCCACATCATTCATTTGAGGACGTTTTTTAATATTGTCGACTATCATGCACTTAGTTGCCAATTTTGCAATTTCTTCAAGAATATTCATATTGCATTCTTCTGCTATTTCTATATCCAACAGTTCCCTCAGTCCTTTTCCCTTTGCACAAGCTTGACGGAAAGCTTCGCAACTTATGCCCCCTTCTTTCATGCTTTTTCGAGCTATAAGTTCTAACAGAACAGCTCCAAAGCTATAGACATCACTCTTCGAGGTAACACGGCCTTCTCTATAATATATAGGATCCATGTAAGCTATACTTCCTTTAACATTAGAAGTCCATCGGGTGATGCCTCCTGAGAGAGACTTTGAGATTCCAAAATCTGAAACTTTTGCTGTAAGATTGGCATCAAGAAGAATGTTTGCAGGCTTAATATCGCCATGACATATAAGGCTGCTACTTGATAAATGCATCGAATGCATGTAGCTCAATGCTTTTGCACATCCCATTGCAATGCCCAAGCGTGTACTCAAAGGGATGAAAATATCACTGTTGTGAAGTGCATCTTCAAGATTCCCATTTGAGATAAACTCAGTTACCATCATCAGTCTATTTTTTCCTATACAGCAGCCTATAAGTTTCACTATATTCTTATGGCTCATTTGAGCATGGATTCTTATCTCTTCCATGAACTCTTCTCTTAAATCTCCACGGATATATCTCTTCACGGCAACTACGTCATCTTCATCATCAAGAACCCCTCTAAATACTTCTCCAAATCCACCCTTTCCAATTAGAGTGCTATAGTTGCTAGTGATTTTCTCAATGTCATGTTCTGTGAAACTCCTAATATTACTATAGTTATCAATTATCCACTTTGCCTTGTCATCCCTTTGGCTGACATGTATGTTCTTCTCTTGTAGAAGTTCCATTGTTTGCCAACAATAAAAATCTCACTGTTATCTTAAAAAAAAACTACTATTTGAAGATGTTGATGAACTGACTCTGCAAAAGACCCAGTGAAAATTTATTAAAGAGTAATAAATATCCTCTGCGAGGCACTATATAGCTTGTTTTTACGAGAAAAAGGACAATATACCACTCCATTAGTTGGATTTCGATAAAATGCCATCCACTACGATGCAAAGGATAAAATATCACTCAATAGGTTATCTTGAGGATATATTGCCACATTGAGAAGGTTTAAGACCAAAATACCCATGTTGTGGAGAAAGAGAAAGGGAGAGGGAAGCCGGACGTTGGCCATGGTCGCCGGCGGTGAGTACGCATGGGGCGGGCGGTGGAGAGAGAGGAAGAGAGAAGGCAGCCGGACGGCGGTAGTGGTCGCTGGTGGCGAGTACGCGGGGAGAGGGGGAGGGACGGTGGAGAGAGAGAGAGGAAAGGAGAGGGGAGCTGGACGGTGGCCGTAGTTGCAGGCGGTGAGTGCGCGGGGAGGTGGGGGAGGGGCGGTGGAGAGAGAGGGGAAGGGAGAGGGGAGCCTTACGGCGGCTGTGGTCGCCAGCGGTGGTCGCGGGGGCGAGGCGGGCGGGCGACCGGGACGACGATGGACGATGGGGAAGATGGACAGACACGCCCGCCGCTTGCCGCTTGCTGGCGTCGAGCGCGCGCATGCGCGTGTCCTCCCCTCGTCGCCGCTCGCCGGAGCGGTCCTCCCCTCGCCGCGCACTCGTCGTCGGTGACCACAGCCGTCGTCCGGCTCCCCTCTTCCTTCCTCTCTCTCCATAGCAGGGGTATTTTAGTCTTAAGCCTTCTCAAAGTGGCAAAATATACTCAAGATAACCTATTGAGTCTATTGAGTGGTATTTTATCCTTTGCATCGTAGTGGATGATATTTTATCGAAACCCAACTAATAGAGTGGCATATTGTCTTTTTTTTCAGTTTTTACCCATTTCTTTCTGCAAAGATAACTTAATTTACTGTACACTTATATTAATCGCAATTTCTTGTTTCATTTGAAAACAACATTATTGAAAACATTATATTGATAACTCCTTCAATCTGTACTTTTAACAATTTAGAGTGGTGTAATATGGAGTTTTCTCCTAATTAATTAAATGCATAGTTCAGCACTTTCTCAGCACTCAACAAACACCATAACTATATTATTGAAACAAGATGAAAAGGAGTACACTCTTGGTGCATGAAAATTTATCACATTAATTAGAGCAAAAAAAAATCACACTGTTGGTTTGTGATTTGTGTACAGAATTTAATTACGGTTACAGAATAAAGCATAGTTTGAGTCCACATCAAATACGATCAATGAATTAATGAAACTCAAATTGAAAATGCTAGAAACAAAAGTTGGCGTAAAAATACTAGAGCAGAACAACAGAAATTCTGAAATTAAAAGTTGGTACCGTGCGAAGAGCTCTACAAGATTTTATTTTATTTTTTAGCTGTCACCATGATAGCGTTGGGAGATGGGAAGACAATGAGCTCTTGGCTTCTTGATTACCTAGTGCCAAATAAAACAGATTGCTCAGGTAATTTGTGGCCTCCAAGAGGAAGAACAGGACACTGTGTGACGCACTCACTAAAGACAACTGGATTCGGGATATAAGGCCGAGCCACATCACTATGCACGAGCACCTCAATGAATTTGTAAACCTCTGGGGTATGATTCAGCGGGTTCACCTCCTTGAATTGCAGCGTGACACAATCACATGGAAGCTAACCCCAATTGGGGAATACACTGCTCAGTCAGCATACAGATTGCAGTTCACAGGCACAACGGCAATTAATATGGGAGGCTCTCCAAGAATATGGGAGGTGGTCCAGCAATGGGCATGCAGAGACCTTCGCATACAAGACTGGGAAGTTGCCACTCAATGATAGAATGGTGGCAAAGAGCATTTTCAACACCACATGCCCCAAAGAAGCCCCTAAAATCGTTAATCATCCTTGTTGCCTGAGAGCTATGGTATGAGCGTAACGCGAGAATCTTCTGTCATACTGCCACAACCCCAATCACCACTATAGCAAGGATAAAAGAAGATGCAAGAGCTTGGGTGAAAGGCAAGGGCAGTGAAGCTCCGAGAGATACCCTCTTTAATTGGGAGATATCATCACCTAGGGAGCCCGCTTCTGCGGACATGGACAATTGGACATCTCCATGCCCTATACATATTTTGTTTTCGATCTTGTAGAACTCCTGAGGACCGCGCATAGCGTGGGTGGCAGGAGCCAGTGGCTCGCTTCGTGCCGACCAGCATTCAAGTCCCAGACTCGACGCTCGTCCCTTACCCGGGGTTTTTTTCCCCTCTTTACCCGGGACTGACTTCGATTGGTCCCGGCTAGGTAACAGGGTACACACACGCGTGCGTGTTTAGTGGGACTGCATGTTTCCCGTACACTGAGGCCTAATGCCTCCAATCTCATCCTAGCGTGTGCTAGGGACGCGCACGCGTGTGTGTGCGTGTGTTGTGGTGTGAGTGTGGTGTGTGTAAGTAGGGATGAAACTGATTCGGATAGTTTCCGTCTGTCCGGACCATTTTTCGGATTCGGATAGTTTCGGTCGGAATTATCTGGAAATTCTTGGATTCGGAAACGAATTCGGATATTTTTTCTCGGAAACGAAAACGAATATAGTAAGGGTACTATTCGTTGGAATCGGAAAATGGTCGGAAACTATCCGGAATTTTTTCGGATATCCGCAGACATTGAGCAAATTTTAGAAAAAATACGTATATATACATAACTTTTTCATACGGAATCAGATGAAGACAAACTTTATATCAACATTGTAGAGCTCGATGAGATCTACAACTTTATTATTGACTATTTTATTATTTGAGGTCATTTAAGGGTCTAAATATTTATTATAATATACCATATTAATTTTACAAAATCTCAGATCTACAATTCAAACGATATCTGAAGGAGATGTGTTTCATATCAAAATTGTAGAGCTCAACGTGATCTACCACTTTGTAGTTTATAACATTTGTATTTGAAGTCATTTAAAGTATAATACAAACATTACAAATTTCGAAGATGTGAAGTAAAATAAATAACATCTCCAATTATACAATGATAAGTAAGTTATACATCTAGTAAAAGGTCTTGGGAATAGAAAATGATAATCATATTTGCATATGGATCTCTTAGAGGAACAACCATGAAAATCGATTTTCACATACAGTTGTGGGACCGTCTACAAAATTGACGATATAAATGTTGGAGATGTTGAACTAAAATAATAAGCAATATCTCTTCCTTGATTAAGAAACTCAATTTGAGAGGTTTTTTATATACCGGTAAATATTCGCTACCGTATTCGTTCCGTCTCGTATTCGCTCCGTATCTGTATTCGATAATATTCGATTTCATTTCCGTATCCGAGTTTTCGATTCCGATTCCGATTCTGAAAAAAAAAATATGAAAACGAATATGATAAAGCTAGTTTCCGTCCGTTTCCGATCCGTTTTCATCTCTATGTGTAAGTGTACGTCCTGAGTTGTTGCCTTGTAAAAAAAAAGATCTTGTAAAACTTCTGCTCTAATAATGTAAGAAGGCAAAGCTTTTGCTCCTTCTTCAAAAGAAAAAAAGAAATGCGTGCATATTACTATCATTAATTGCAAGCATGTCTGATGTCTCATAAGCACTACCGCAAGTGAGGAGAAATAATTAAGCGATGAGCCGATGATTGAATGATGGAATCGAACAGATACTATGGTCTTCTACATACCTGTGGCCTAGCTAGCTAGGCAATAATGGGATCGATGTCACCGGCGAAAGTTGCTGCGCCGACGACGTATGGCCACCACCCACCAGATCCT
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| CDS seq | ATGGAACTTCTACAAGAGAAGAACATACATGTCAGCCAAAGGGATGACAAGGCAAAGTGGATAATTGATAACTATAGTAATATTAGGAGTTTCACAGAACATGACATTGAGAAAATCACTAGCAACTATAGCACTCTAATTGGAAAGGGTGGATTTGGAGAAGTATTTAGAGGGGTTCTTGATGATGAAGATGACGTAGTTGCCGTGAAGAGATATATCCGTGGAGATTTAAGAGAAGAGTTCATGGAAGAGATAAGAATCCATGCTCAAATGAGCCATAAGAATATAGTGAAACTTATAGGCTGCTGTATAGGAAAAAATAGACTGATGATGGTAACTGAGTTTATCTCAAATGGGAATCTTGAAGATGCACTTCACAACAGTGATATTTTCATCCCTTTGAGTACACGCTTGGGCATTGCAATGGGATGTGCAAAAGCATTGAGCTACATGCATTCGATGCATTTATCAAGTAGCAGCCTTATATGTCATGGCGATATTAAGCCTGCAAACATTCTTCTTGATGCCAATCTTACAGCAAAAGTTTCAGATTTTGGAATCTCAAAGTCTCTCTCAGGAGGCATCACCCGATGGACTTCTAATGTTAAAGGAAGTATAGCTTACATGGATCCTATATATTATAGAGAAGGCCGTGTTACCTCGAAGAGTGATGTCTATAGCTTTGGAGCTGTTCTGTTAGAACTTATAGCTCGAAAAAGCATGAAAGAAGGGGGCATAAGTTGCGAAGCTTTCCGTCAAGCTTGTGCAAAGGGAAAAGGACTGAGGGAACTGTTGGATATAGAAATAGCAGAAGAATGCAATATGAATATTCTTGAAGAAATTGCAAAATTGGCAACTAAGTGCATGATAGTCGACAATATTAAAAAACGTCCTCAAATGAATGATGTGGCTGAACACCTTCGGACTTGGATTTTTCAAGTCCGGAATGGTGGACATGAAAAACCAGCTTGGGAATCCACTTTGGATAAAGTACATGATGCATTGAAGAAAGGTACATCATCAAACTTTTGGGTCATTGTTCCGATGCTGATCATCTTCCTATTCTCATATATGAGTATGCTGCTAAAGGGAGCCTCAATGACATTCTGTACTCTAAAGAAGATTTCCCACTAG
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| Protein seq | MELLQEKNIHVSQRDDKAKWIIDNYSNIRSFTEHDIEKITSNYSTLIGKGGFGEVFRGVLDDEDDVVAVKRYIRGDLREEFMEEIRIHAQMSHKNIVKLIGCCIGKNRLMMVTEFISNGNLEDALHNSDIFIPLSTRLGIAMGCAKALSYMHSMHLSSSSLICHGDIKPANILLDANLTAKVSDFGISKSLSGGITRWTSNVKGSIAYMDPIYYREGRVTSKSDVYSFGAVLLELIARKSMKEGGISCEAFRQACAKGKGLRELLDIEIAEECNMNILEEIAKLATKCMIVDNIKKRPQMNDVAEHLRTWIFQVRNGGHEKPAWESTLDKVHDALKKGTSSNFWVIVPMLIIFLFSYMSMLLKGASMTFCTLKKISH |
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| Function | Wall-associated receptor kinase-like 2 [UniProtKB/Swiss-Prot:Q7X8C5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0555600 | OsNip_11t0555600-01 | Chr11 | 20651030 | 20654076 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAACTTCTACAAGAGAAGAACATACATGTCAGCCAAAGGGATGACAAGGCAAAGTGGATAATTGATAACTATAGTAATATTAGGAGTTTCACAGAACATGACATTGAGAAAATCACTAGCAACTATAGCACTCTAATTGGAAAGGGTGGATTTGGAGAAGTATTTAGAGGGGTTCTTGATGATGAAGATGACGTAGTTGCCGTGAAGAGATATATCCGTGGAGATTTAAGAGAAGAGTTCATGGAAGAGATAAGAATCCATGCTCAAATGAGCCATAAGAATATAGTGAAACTTATAGGCTGCTGTATAGGAAAAAATAGACTGATGATGGTAACTGAGTTTATCTCAAATGGGAATCTTGAAGATGCACTTCACAACAGTGATATTTTCATCCCTTTGAGTACACGCTTGGGCATTGCAATGGGATGTGCAAAAGCATTGAGCTACATGCATTCGATGCATTTATCAAGTAGCAGCCTTATATGTCATGGCGATATTAAGCCTGCAAACATTCTTCTTGATGCCAATCTTACAGCAAAAGTTTCAGATTTTGGAATCTCAAAGTCTCTCTCAGGAGGCATCACCCGATGGACTTCTAATGTTAAAGGAAGTATAGCTTACATGGATCCTATATATTATAGAGAAGGCCGTGTTACCTCGAAGAGTGATGTCTATAGCTTTGGAGCTGTTCTGTTAGAACTTATAGCTCGAAAAAGCATGAAAGAAGGGGGCATAAGTTGCGAAGCTTTCCGTCAAGCTTGTGCAAAGGGAAAAGGACTGAGGGAACTGTTGGATATAGAAATAGCAGAAGAATGCAATATGAATATTCTTGAAGAAATTGCAAAATTGGCAACTAAGTGCATGATAGTCGACAATATTAAAAAACGTCCTCAAATGAATGATGTGGCTGAACACCTTCGGACTTGGATTTTTCAAGTCCGGAATGGTGGACATGAAAAACCAGCTTGGGAATCCACTTTGGATAAAGTACATGATGCATTGAAGAAAGGTACATCATCAAACTTTTGGGTCATTGTTCCGATGCTGATCATCTTCCTATTCTCATATATGAGTATGCTGCTAAAGGGAGCCTCAATGACATTCTGTACTCTAAAGAAGATTTCCCACTAG
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| Protein seq | MELLQEKNIHVSQRDDKAKWIIDNYSNIRSFTEHDIEKITSNYSTLIGKGGFGEVFRGVLDDEDDVVAVKRYIRGDLREEFMEEIRIHAQMSHKNIVKLIGCCIGKNRLMMVTEFISNGNLEDALHNSDIFIPLSTRLGIAMGCAKALSYMHSMHLSSSSLICHGDIKPANILLDANLTAKVSDFGISKSLSGGITRWTSNVKGSIAYMDPIYYREGRVTSKSDVYSFGAVLLELIARKSMKEGGISCEAFRQACAKGKGLRELLDIEIAEECNMNILEEIAKLATKCMIVDNIKKRPQMNDVAEHLRTWIFQVRNGGHEKPAWESTLDKVHDALKKGTSSNFWVIVPMLIIFLFSYMSMLLKGASMTFCTLKKISH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0555600 | OsNip_11t0555600-02 | Chr11 | 20651085 | 20657181 | - | IsoSeq | ||
| CDS seq | ATGTGTACAGCTTCGGTGTCGTTCTCTTTGAACTCATCAGCAGGAAGAAACCTGTATATCATTGTCATGACAACAATCGTCGACTCATCCCTGAATTCATCAGAGCTTACGAGACAGCCAAGAGTGGGAAGGCAATGTTTGATGAAGGGATCATGGCTGAAGAAGATATCGCTGTCCTTGAAGAGATTGGGAGGCTGGCAATGGAGTGCGTCAGCTTGGAAATCGACGGAAGGCCGA
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| Protein seq | MCTASVSFSLNSSAGRNLYIIVMTTIVDSSLNSSELTRQPRVGRQCLMKGSWLKKISLSLKRLGGWQWSASAWKSTEGR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AF | Chr11 | 20653383 | 20657181 | - | OsNip_11t0555600-01 | OsNip_11t0555600-02,OsNip_11t0555600-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.780068 | 0.145547 | 1.248361 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0556400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35220 | RBH | 0.519547 | 0.177197 | 0.336267 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0555600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017250 | RBH | 0.357500 | 6.910144 | 1.626591 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017310 | RBH | 0.0 | 0.934325 | 1.289099 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017190 | RBH | 0.486686 | 6.316095 | 3.488560 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016810 | RBH | 0.082794 | 0.079821 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017070 | SBH | 0.460573 | 2.667517 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0322900 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017610 | RBH | 0.0 | 0.034891 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0332900 | RBH | 0 | 0.26988 | 0.0049945 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017410 | SBH | 0.0 | 0.046933 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017480 | SBH | 0.457837 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016950 | SBH | 0.922729 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016870 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017030 | SBH | 0.100877 | 0.465939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016980 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017320 | RBH | 0.0 | 0.0 | 0.0 |
