Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0227800 | OGI:11019820 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:6703146-6708873 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGTTCAGACTTCAGAGGATGCTGCTAAGCGCGTGGGACTTGATCTCAAGTCGTCGCAGCCTCGCAGGCTAAAGATCAAGGCGAGGGAGAGAGAGGGGAGTAGCCTCTCGACCTCCAAAAATCATCATCTGACTAGCTCTGCTCTTCGATGGATTAGCTGACGAAAGAAGACCCTTGTTCTGATTTGAGGTGAGATTCTATCTCTTGCTGCTTGCAGCTCTAGCTCGAAGATCTGTACTGAATCTTCTCGTATTTTTGGTGCCTTACAGACTCTCAGATCTGGAATAGTTTTCCTGTTTTTTTGTCTGCTTGGAAGTTATACAGTTTCTGGCGAGAATTTTCCTCCTGGGAGAAGAGATTATTAGTTCTTTTTTGCTTGAAAATCTTGGGGATTAGTTATGAATTTGAGCGACAATCACATAGAACAGCAGTGAACAGCTTTTTTCTGGTTTAGTTCTGCATTTTGGAGATCTCTGTATATACTGGCAGTACAACTATATCAATTTCAACATCACATTGTTTTGTTCTGATGTTTTATTGAAAGAATAATTCTTTTTTAACTTTAGTGCAGGGTTTTCATCACATTATTTCGCCAACTGCTGCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGGTAATCAGTCTCAAATGTTTGCATCCTCTCATATATTTATCTCTTTGGCTGATGTTATATTGAGTTGCTACGGCCATCTGCTTCAGTTTAGATAAAGAATTCTCATTAGTAACAATCCCAATAATTTCCCTGCAATGTAGTTTGACATCACCCTGTACTTGGGTGAAAGCACAAACTTAGAGAATAAAATAAAAGTTACAGGATAAATTAGTTTGGCGACATAAAGAGACAGAAACATGCCAACTTGGTTCCTAGGTCCTTGGCTAAACTGCTGATGCTCATGCATTTAGCAGCGGCCACATTAACTGATTGTCCGAAAAACATCAGTTTATTTTCAGTTGAACTCTCACACAAACACCATCCTCAGAGCTTCAGTGAAGTTCTGTTGTAAAGAAAGCATTTCTACAAATAGAGCATTGCACCAGTAAAGGATTCAACCAAAATAACCATTCTACATCTTGGTATAAAGAAATTTGAAGTTCTGAACCCACAAGTACATCCAATGGTCATGTCTTTAGATATGAAACTGCTTTGAACTTTAAAAAGCTTTTTGGCAAGACAGAGGGTAAGATCCAACCACTTGAGAAGTTCAGATTGGTGGGAAACAATGACTAATTTCCATGACATTCAGAAAGGATTGGTTTTACTAACTCCCTAAGGGTAAGAGACAGCTATAAGCTATAAAATAAGACTGCACCACGCAATACCTCGTCCAATAGAACCAGAGTCTTTCAATGAACATAACAATTTTTAAGGAGCAACAGTTTGCCACAGGCTTAGAAATGAAAATGGATTAGGATCACCATCTTGCAATAGACTTCCTCATCTCCAGCACTATTTCTGGATTAAACAGCACAGGAAATGACCGCAAATGCCGTTCCTCCAGTAAGGACCCTTCAGGATTGGTTCATGATGAACTTGGATACTATATAATTCCACACCACAAAAGACACTTAGGTTATGGCCGCTTGGTTAAGAAATTCATCTATAACCTTAGATATGAAAGGAAATATTATATTGGAATTTAGGCAACATTATCATCCTTTGCTTTGCACTTCTAAGAAAGTTAATTTCCTACTTTGGATAAAGGATATATATATATATACCTTTTGATAAGTAGGTCCACCTGATAATGCATAAGAATAACGATCTTGTTACGAACAAGAAAGCAGTTTGTTAAGAAAGATGAAATAGCAGAAATCATTGGGTAAACATGGTAACATCACCTCTTGAAGAAAACATAGATGCTTTCCAACAAGACAATTAACACATAATTCATTCCATTAGTAGAAGAAATCATAGCAGTGGGATTTAAATCAATAAGAAGTAGGTCTCTCCAGCTAATGAATAAAATGAAAATTATGAACTTTACGGGCACAAAAATGCTTACCTTCAGTGACATATAACACCATAAATGGTCCAAAAATATTTACCTGATGAAATTACGAGTGTTGCAGGCGCTTCAAACAAAACAGTTCTCAAGTATCAGCTATATCCACCAAAAGTGATCAAATATGTCTGATGTGTGATCATCATTGTGTTATTTTTTTTCCTTTTTACAAACCAGAATAACCAAGTAGTACTAAATCTGGACATATGATGTATCACATCCAACCAAAATCCCTTGTATTTAGAGATGGAGGGAGTAATTATTGCTAGTGGTGATGATGTGGTATGGTTATATGTTGAGCTTTAGATTTAGTGGGCTATAATTTTATAGAAAGTATAGATTAAGATTAGCTTTACTTTCTCACTCATTCACTAGGAGGATGGTATGTCTTGACACAGCTCCTTCACCTATATCTATTGGTACATCATGGTGAATACTTGAATACATATATGGCTTGCAAATTCCCACAAGGGTCGTAAAAACAATCTTAGCTGTAATTGTTCTACAACAGTAACAAGTACCCTTTTTATCTTTTAAATTCGTTATGTGACAAAGCTCCATGATTCATGATTCTATTCTGCAGCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTACAGCTTTGGGAGATGAAGCCACCAGGGCTGTCATAGCCAAACTCTCCGGAAAAGTATCTAACTTGAGGGAACTTCCTGACAAAGTTGAGTATATCAGAAGGGAATTGCGTCTCATGAAAGATGTAATACAAGATTTAGATTCCACAAATACCAACATGAATGTTGTCAAGGGTTGGATCGACGAACTGCGGAAGCTGGCTTACCGTGTTGAAGACATAATGGACAAGTACTCATACTATGCTTGTCAACGGCAGCAAGAAGGATCAGTGATGAGATGCGTAAGAGGAGCACATTATGCAGGTGTTTTCAGTGAAGTTGCTAGTGAGGTAATGAAGATAAAGGGTGATGTTGAACAGGTTAAAAGACAGCAAATGGAATGGTTACCTACAGTTCAGCTCATTTCAAGAACACCCACTGACATCGAAACACCGCGATCTCAAGGAAGAAGAAAGTTGCTTGAATGTGGCGATCCTGTGGGGATTGAATACAACAGGAAAAGGTTGCTTGAATTACTGTACCCTGAAGAACCAGGCCACAAAGTGATAACAGTGTCTGGTATGGGTGGACTGGGAAAAACCACCCTGGCCTTAGACGTATTTGAACGTGAAAAGATCAAGTTCCCAGTTCATGCCTGGATCACTGTGTCACAGACTTGCACGATCCTTAGTCTTCTAAGACAGTTAGTCAGTCCGCTCATACCCATGGAACAAGAATCATCAGAATCCAAGGAAGATCTAATCAACAAAATGGGCGTTCATGAATTGACAAAAGAATTAAACAGAAGGACTGAAAACTGTACATCATGTTTGATTGTGCTAGATGATGTCTGGGACCAGAACGTGTACTTCGAAATACAGGGCATGCTTAAGAATCCCCAAGCAAGTCGCATTATCATCACGACACGGATGGAACATGTGGCAGTTCTTGCTCCCTCTGAATGCCATCTCAAGATACAGGCTTTGGGTGAAATTGATGCATTCAACCTTTTCTGCAGAAGGGCATTTTACAACACAAAGGACCATAGGTGCCCGCTGGACCTTGAGAATGTGGCTGCCTCCATAGTAAGTAAGTGTAAGGGGCTGCCCCTAGCACTTGTTACCATGGGTGGCCTGATGTCCACAAAGCTACAAACTGAGCATGCCTGGCAACAAATGTACAACCAGCTTCGGAGTGAGCTGGCCAAAAATGATGATGTCAAGGCAATTCTGAAAGTAAGCTACCATGCATTACCAGCTGACCAAAAGAACTGCTTCTTGTACTGCAGCCTGTTCCCTGAAGATTTTCGCATATCTCGTGAGAGCCTTGTGCGGTACTGGGTTGCAGAAGGTTTTGCGGTGAGAATCGAACACAATAGACCAGAAGATGTGGCCGAAATAAATCTCATGGAACTGATCCACCGGAACATGCTTGAAGTTGACGAGTATGATGAGCTTGGCAAGGTGATCTCTTGTAAGATGCATGACATTGTGCGCAACCTGGCTCTCTCAATTGCTGGACAGGAGAGGTTCGGTTACGCAAATGATTATGGAGCTGTGGAAAAGGTTGATTGGGAAGTCCGTCGTCTGTCATTATTCTTGAACAATGGAAAAGGTTGTGCATCAACAGTGAAATTTCCACATCTTCGCACACTACTTGAAACAACTACACACCCTCCTGGATTGTTATCCTCAATTTTGTCTGAATCCAAATACCTCACTGTCCTAGAGCTACAAGACTCAGATATCACCGAAGTACCAGCATGCATAGGCAAATTGTTTAATTTACGTTACATTGGCTTAAGGCGGACAAGACTCTGCTCACTACCAGAGTCTATTGACAAGCTCTCAAACCTGCAAACTCTGGACATCAAGCAAACTAAAATAGAGAAGCTACCACGTGGAATCACTAAGATCAAGAAGCTGAGGCACCTTCTAGCTGACAGATATGAGGATGAAAATAAGTCAGAGTTCCGGTATTTTATTGGAGTGCAAGCACCCAAATATCTGTCTAAGTTGGAAGAACTTCAGACTCTTGAGACTGTGGAAGCCAGCAAGGACTTGGCCGAGCAGCTGAAGGAACTAATGCAGATAAGAAGTATTTGGATTGACAACATAAGTTCTGCTGATTGTGGAAATATTTTTGCTACACTATCAAATATGCCGCTTCTTTCCAGCTTGCTTCTTTCGGCAAAGGATGAAAATGAGCCACTTTGTTTTGAGGCTCTCCAGCCCATTTCCAATGAACTCCACAGGTTAATTATCAGAGGGCAATGGGCTAAGGGCACACTAGACTACCCGATATTTCATAGCCATGGTACATATCTGAAATATTTAGCTCTAAGTTGGTGTCATCTTGGTGAAGATCCACTGGGGATGCTCGCATCACACTTGTCAAACCTCACTTATCTAAGACTGAACAACATGCACAGTTCGAAAACTTTGGTTCTTGATGCAGAGGCGTTCCCCCACCTGAAGACTCTTGTGTTAATGCACATGCCTGATGTCAACCAGATAAACATCACGGATGGCGCCCTTCCATGCATCGAAGGTTTATACATTGTATCATTGCGGAAGCTGGATAAAGTCCCTCAAGGCATTGAATCCCTTGCCTCCCTAAAGAAGCTCTGTTTGATGGACCTGCACAAAGACTTCAAGACTCAATGGAATGGTGACGTGATGCACCAGAAGATGCTGCATATTGCAGAGATCCATGTAGGGTGGTGAAGCCAGGATTTAGAGACGGGGGGTGCCATCTACGAGACGTGGTAACTCACTTAAGGTTCGGTGAACAGTGACATTGTAGCGTTGATGTATGATTGCTAACTCGACATCATACATGTTATAGCGATTAGCTAGAAGAGAGAATGAGAACCTATAGATCATAATTTGCCAATTTAAACAGTTTGTTCCATGATTTTAATTGGAGTCTTGCAATCATTTTTAAAATGATAAATCAGTTAACTAAGTCATTTCATAAGTCCTATATATATAGCTAGGCAGTTGTCCTATATAGTTAGTCTCATCCGCAACTAATGATGTAATTAATGGCTAGATTATAAGGGCTAATTATCCTTGGG
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| CDS seq | ATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTACAGCTTTGGGAGATGAAGCCACCAGGGCTGTCATAGCCAAACTCTCCGGAAAAGTATCTAACTTGAGGGAACTTCCTGACAAAGTTGAGTATATCAGAAGGGAATTGCGTCTCATGAAAGATGTAATACAAGATTTAGATTCCACAAATACCAACATGAATGTTGTCAAGGGTTGGATCGACGAACTGCGGAAGCTGGCTTACCGTGTTGAAGACATAATGGACAAGTACTCATACTATGCTTGTCAACGGCAGCAAGAAGGATCAGTGATGAGATGCGTAAGAGGAGCACATTATGCAGGTGTTTTCAGTGAAGTTGCTAGTGAGGTAATGAAGATAAAGGGTGATGTTGAACAGGTTAAAAGACAGCAAATGGAATGGTTACCTACAGTTCAGCTCATTTCAAGAACACCCACTGACATCGAAACACCGCGATCTCAAGGAAGAAGAAAGTTGCTTGAATGTGGCGATCCTGTGGGGATTGAATACAACAGGAAAAGGTTGCTTGAATTACTGTACCCTGAAGAACCAGGCCACAAAGTGATAACAGTGTCTGGTATGGGTGGACTGGGAAAAACCACCCTGGCCTTAGACGTATTTGAACGTGAAAAGATCAAGTTCCCAGTTCATGCCTGGATCACTGTGTCACAGACTTGCACGATCCTTAGTCTTCTAAGACAGTTAGTCAGTCCGCTCATACCCATGGAACAAGAATCATCAGAATCCAAGGAAGATCTAATCAACAAAATGGGCGTTCATGAATTGACAAAAGAATTAAACAGAAGGACTGAAAACTGTACATCATGTTTGATTGTGCTAGATGATGTCTGGGACCAGAACGTGTACTTCGAAATACAGGGCATGCTTAAGAATCCCCAAGCAAGTCGCATTATCATCACGACACGGATGGAACATGTGGCAGTTCTTGCTCCCTCTGAATGCCATCTCAAGATACAGGCTTTGGGTGAAATTGATGCATTCAACCTTTTCTGCAGAAGGGCATTTTACAACACAAAGGACCATAGGTGCCCGCTGGACCTTGAGAATGTGGCTGCCTCCATAGTAAGTAAGTGTAAGGGGCTGCCCCTAGCACTTGTTACCATGGGTGGCCTGATGTCCACAAAGCTACAAACTGAGCATGCCTGGCAACAAATGTACAACCAGCTTCGGAGTGAGCTGGCCAAAAATGATGATGTCAAGGCAATTCTGAAAGTAAGCTACCATGCATTACCAGCTGACCAAAAGAACTGCTTCTTGTACTGCAGCCTGTTCCCTGAAGATTTTCGCATATCTCGTGAGAGCCTTGTGCGGTACTGGGTTGCAGAAGGTTTTGCGGTGAGAATCGAACACAATAGACCAGAAGATGTGGCCGAAATAAATCTCATGGAACTGATCCACCGGAACATGCTTGAAGTTGACGAGTATGATGAGCTTGGCAAGGTGATCTCTTGTAAGATGCATGACATTGTGCGCAACCTGGCTCTCTCAATTGCTGGACAGGAGAGGTTCGGTTACGCAAATGATTATGGAGCTGTGGAAAAGGTTGATTGGGAAGTCCGTCGTCTGTCATTATTCTTGAACAATGGAAAAGGTTGTGCATCAACAGTGAAATTTCCACATCTTCGCACACTACTTGAAACAACTACACACCCTCCTGGATTGTTATCCTCAATTTTGTCTGAATCCAAATACCTCACTGTCCTAGAGCTACAAGACTCAGATATCACCGAAGTACCAGCATGCATAGGCAAATTGTTTAATTTACGTTACATTGGCTTAAGGCGGACAAGACTCTGCTCACTACCAGAGTCTATTGACAAGCTCTCAAACCTGCAAACTCTGGACATCAAGCAAACTAAAATAGAGAAGCTACCACGTGGAATCACTAAGATCAAGAAGCTGAGGCACCTTCTAGCTGACAGATATGAGGATGAAAATAAGTCAGAGTTCCGGTATTTTATTGGAGTGCAAGCACCCAAATATCTGTCTAAGTTGGAAGAACTTCAGACTCTTGAGACTGTGGAAGCCAGCAAGGACTTGGCCGAGCAGCTGAAGGAACTAATGCAGATAAGAAGTATTTGGATTGACAACATAAGTTCTGCTGATTGTGGAAATATTTTTGCTACACTATCAAATATGCCGCTTCTTTCCAGCTTGCTTCTTTCGGCAAAGGATGAAAATGAGCCACTTTGTTTTGAGGCTCTCCAGCCCATTTCCAATGAACTCCACAGGTTAATTATCAGAGGGCAATGGGCTAAGGGCACACTAGACTACCCGATATTTCATAGCCATGGTACATATCTGAAATATTTAGCTCTAAGTTGGTGTCATCTTGGTGAAGATCCACTGGGGATGCTCGCATCACACTTGTCAAACCTCACTTATCTAAGACTGAACAACATGCACAGTTCGAAAACTTTGGTTCTTGATGCAGAGGCGTTCCCCCACCTGAAGACTCTTGTGTTAATGCACATGCCTGATGTCAACCAGATAAACATCACGGATGGCGCCCTTCCATGCATCGAAGGTTTATACATTGTATCATTGCGGAAGCTGGATAAAGTCCCTCAAGGCATTGAATCCCTTGCCTCCCTAAAGAAGCTCTGTTTGATGGACCTGCACAAAGACTTCAAGACTCAATGGAATGGTGACGTGATGCACCAGAAGATGCTGCATATTGCAGAGATCCATGTAGGGTGGTGA
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| Protein seq | MAEAVLLAISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRTPTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLHIAEIHVGW |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0227800 | OsNip_11t0227800-01 | Chr11 | 6703146 | 6708873 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTACAGCTTTGGGAGATGAAGCCACCAGGGCTGTCATAGCCAAACTCTCCGGAAAAGTATCTAACTTGAGGGAACTTCCTGACAAAGTTGAGTATATCAGAAGGGAATTGCGTCTCATGAAAGATGTAATACAAGATTTAGATTCCACAAATACCAACATGAATGTTGTCAAGGGTTGGATCGACGAACTGCGGAAGCTGGCTTACCGTGTTGAAGACATAATGGACAAGTACTCATACTATGCTTGTCAACGGCAGCAAGAAGGATCAGTGATGAGATGCGTAAGAGGAGCACATTATGCAGGTGTTTTCAGTGAAGTTGCTAGTGAGGTAATGAAGATAAAGGGTGATGTTGAACAGGTTAAAAGACAGCAAATGGAATGGTTACCTACAGTTCAGCTCATTTCAAGAACACCCACTGACATCGAAACACCGCGATCTCAAGGAAGAAGAAAGTTGCTTGAATGTGGCGATCCTGTGGGGATTGAATACAACAGGAAAAGGTTGCTTGAATTACTGTACCCTGAAGAACCAGGCCACAAAGTGATAACAGTGTCTGGTATGGGTGGACTGGGAAAAACCACCCTGGCCTTAGACGTATTTGAACGTGAAAAGATCAAGTTCCCAGTTCATGCCTGGATCACTGTGTCACAGACTTGCACGATCCTTAGTCTTCTAAGACAGTTAGTCAGTCCGCTCATACCCATGGAACAAGAATCATCAGAATCCAAGGAAGATCTAATCAACAAAATGGGCGTTCATGAATTGACAAAAGAATTAAACAGAAGGACTGAAAACTGTACATCATGTTTGATTGTGCTAGATGATGTCTGGGACCAGAACGTGTACTTCGAAATACAGGGCATGCTTAAGAATCCCCAAGCAAGTCGCATTATCATCACGACACGGATGGAACATGTGGCAGTTCTTGCTCCCTCTGAATGCCATCTCAAGATACAGGCTTTGGGTGAAATTGATGCATTCAACCTTTTCTGCAGAAGGGCATTTTACAACACAAAGGACCATAGGTGCCCGCTGGACCTTGAGAATGTGGCTGCCTCCATAGTAAGTAAGTGTAAGGGGCTGCCCCTAGCACTTGTTACCATGGGTGGCCTGATGTCCACAAAGCTACAAACTGAGCATGCCTGGCAACAAATGTACAACCAGCTTCGGAGTGAGCTGGCCAAAAATGATGATGTCAAGGCAATTCTGAAAGTAAGCTACCATGCATTACCAGCTGACCAAAAGAACTGCTTCTTGTACTGCAGCCTGTTCCCTGAAGATTTTCGCATATCTCGTGAGAGCCTTGTGCGGTACTGGGTTGCAGAAGGTTTTGCGGTGAGAATCGAACACAATAGACCAGAAGATGTGGCCGAAATAAATCTCATGGAACTGATCCACCGGAACATGCTTGAAGTTGACGAGTATGATGAGCTTGGCAAGGTGATCTCTTGTAAGATGCATGACATTGTGCGCAACCTGGCTCTCTCAATTGCTGGACAGGAGAGGTTCGGTTACGCAAATGATTATGGAGCTGTGGAAAAGGTTGATTGGGAAGTCCGTCGTCTGTCATTATTCTTGAACAATGGAAAAGGTTGTGCATCAACAGTGAAATTTCCACATCTTCGCACACTACTTGAAACAACTACACACCCTCCTGGATTGTTATCCTCAATTTTGTCTGAATCCAAATACCTCACTGTCCTAGAGCTACAAGACTCAGATATCACCGAAGTACCAGCATGCATAGGCAAATTGTTTAATTTACGTTACATTGGCTTAAGGCGGACAAGACTCTGCTCACTACCAGAGTCTATTGACAAGCTCTCAAACCTGCAAACTCTGGACATCAAGCAAACTAAAATAGAGAAGCTACCACGTGGAATCACTAAGATCAAGAAGCTGAGGCACCTTCTAGCTGACAGATATGAGGATGAAAATAAGTCAGAGTTCCGGTATTTTATTGGAGTGCAAGCACCCAAATATCTGTCTAAGTTGGAAGAACTTCAGACTCTTGAGACTGTGGAAGCCAGCAAGGACTTGGCCGAGCAGCTGAAGGAACTAATGCAGATAAGAAGTATTTGGATTGACAACATAAGTTCTGCTGATTGTGGAAATATTTTTGCTACACTATCAAATATGCCGCTTCTTTCCAGCTTGCTTCTTTCGGCAAAGGATGAAAATGAGCCACTTTGTTTTGAGGCTCTCCAGCCCATTTCCAATGAACTCCACAGGTTAATTATCAGAGGGCAATGGGCTAAGGGCACACTAGACTACCCGATATTTCATAGCCATGGTACATATCTGAAATATTTAGCTCTAAGTTGGTGTCATCTTGGTGAAGATCCACTGGGGATGCTCGCATCACACTTGTCAAACCTCACTTATCTAAGACTGAACAACATGCACAGTTCGAAAACTTTGGTTCTTGATGCAGAGGCGTTCCCCCACCTGAAGACTCTTGTGTTAATGCACATGCCTGATGTCAACCAGATAAACATCACGGATGGCGCCCTTCCATGCATCGAAGGTTTATACATTGTATCATTGCGGAAGCTGGATAAAGTCCCTCAAGGCATTGAATCCCTTGCCTCCCTAAAGAAGCTCTGTTTGATGGACCTGCACAAAGACTTCAAGACTCAATGGAATGGTGACGTGATGCACCAGAAGATGCTGCATATTGCAGAGATCCATGTAGGGTGGTGA
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| Protein seq | MAEAVLLAISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRTPTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLHIAEIHVGW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.045701 | 1.182262 | 1.585759 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0229700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g12050 | RBH | 0.633867 | 0.715856 | 0.368127 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0227800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008030 | SBH | 0.193260 | 19.767826 | 1.430310 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008040 | SBH | 0.198904 | 6.296239 | 0.434316 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007970 | SBH | 0.305399 | 8.817049 | 1.676870 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007770 | SBH | 0.137865 | 0.304908 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007930 | SBH | 11.121528 | 1.201072 | 13.343512 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0105900 | SBH | 0.109065 | 0.603869 | 0.012481 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007970 | SBH | 0.879948 | 0.0 | 1.119563 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0112200 | SBH | 15.4623085 | 6.930455 | 2.7797995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008010 | SBH | 0.031650 | 0.052251 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007980 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007980 | RBH | 0.0 | 5.035278 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007980 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008050 | SBH | 0.714762 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008000 | SBH | 0.370055 | 4.354017 | 0.451209 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007810 | SBH | 1.236004 | 20.805704 | 1.013925 |
