Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0168600 | OGI:11010050 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:3315686-3316207 | ||||||||
| Gene Symbol | RLCK311, OsRLCK311, RLCK350, OsRLCK350 | ||||||||||
| DNA seq | CAGATGTGTATAGCTTCGGCGTGCTACTGATGGAAATGGTTACCGGCCGGCGACCAAGCTGGCCGGTGAAGATCAACATGAAAGGGAAAGAGGTAGAGATGCTGAAATGGGCTAGGGATAAGGTAGACAAGGGCCAGGCATTGGAGATCCTGGACCGTCAGATGGGGATCCAATGGGAAGGGAGAGAGGCTGACCAAGATGAAATGATAGCGTATTTGGATGTGGCACGGCGTTGCACGGAGGAGAGCCCTAAGCACCGGCCATCCATGGAAGAAGTGGTTGAGATGCTCAACAAGATCTAAACCTGATTGAGAGCACATAGATTGAAATGCTTTAGATAGCTGTAGCCATGTGAAGTTCAATCAAACTTCCGGTTAGATTTTCTGTCTAGTTTGGGCTGATTATGATGCAAGATCATACTTTGGAATTGGGAATTAATTATAAACCATGGTGAGTATGAATGTTGAAGGGCAAACATGCCAATGCCTATCGTTGTATGGTAATGTTTGTAACTTGGTGATG
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| CDS seq | GATGTGTATAGCTTCGGCGTGCTACTGATGGAAATGGTTACCGGCCGGCGACCAAGCTGGCCGGTGAAGATCAACATGAAAGGGAAAGAGGTAGAGATGCTGAAATGGGCTAGGGATAAGGTAGACAAGGGCCAGGCATTGGAGATCCTGGACCGTCAGATGGGGATCCAATGGGAAGGGAGAGAGGCTGACCAAGATGAAATGATAGCGTATTTGGATGTGGCACGGCGTTGCACGGAGGAGAGCCCTAAGCACCGGCCATCCATGGAAGAAGTGGTTGAGATGCTCAACAAGATCTAA |
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| Protein seq | DVYSFGVLLMEMVTGRRPSWPVKINMKGKEVEMLKWARDKVDKGQALEILDRQMGIQWEGREADQDEMIAYLDVARRCTEESPKHRPSMEEVVEMLNKI |
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| Function | Brassinosteroid LRR receptor kinase BRL2 [UniProtKB/Swiss-Prot:Q7G768] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0168600 | OsNip_11t0168600-01 | Chr11 | 3315686 | 3316207 | + | RAP2018-11-26 | ||
| CDS seq | GATGTGTATAGCTTCGGCGTGCTACTGATGGAAATGGTTACCGGCCGGCGACCAAGCTGGCCGGTGAAGATCAACATGAAAGGGAAAGAGGTAGAGATGCTGAAATGGGCTAGGGATAAGGTAGACAAGGGCCAGGCATTGGAGATCCTGGACCGTCAGATGGGGATCCAATGGGAAGGGAGAGAGGCTGACCAAGATGAAATGATAGCGTATTTGGATGTGGCACGGCGTTGCACGGAGGAGAGCCCTAAGCACCGGCCATCCATGGAAGAAGTGGTTGAGATGCTCAACAAGATCTAA
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| Protein seq | DVYSFGVLLMEMVTGRRPSWPVKINMKGKEVEMLKWARDKVDKGQALEILDRQMGIQWEGREADQDEMIAYLDVARRCTEESPKHRPSMEEVVEMLNKI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.200244 | 0.603528 | 1.680637 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0121100 | SBH | 1.532062 | 1.550845 | 4.505443 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g06780 | RBH | 0.287834 | 0.299261 | 0.156529 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0168600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004640 | RBH | 0.000000 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004690 | RBH | 0.000000 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004640 | RBH | 0.000000 | 1.524612 | 1.124487 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004590 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004490 | RBH | 0.0 | 0.0 | 0.768177 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0057700 | RBH | 0.622835 | 2.463428 | 0.987793 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004570 | RBH | 0.000000 | 0.0 | 0.083726 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0058300 | RBH | 0.876626 | 3.945074 | 1.2178765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004500 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004570 | RBH | 0.123914 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004570 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004540 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004580 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004620 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004550 | RBH | 0.0 | 0.0 | 0.0 |
