Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_08g0102050 OGI:02056570 | 3/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr08:114259-114402
Gene Symbol -
DNA seq

TCACGACCTGCTCGCTGAGGAATGGAGGTCCAGTTGCTGGTGCCATGGGTGGAGGTGTACGCTAGCAGCTTGGCGCGCGTCCTCCTCCGCCGTCCATGGCCCCTTCTTCACGTTTGCCTTCTCGCAGCACAGCGGCCGCCCCAT
CDS seq

ATGGGGCGGCCGCTGTGCTGCGAGAAGGCAAACGTGAAGAAGGGGCCATGGACGGCGGAGGAGGACGCGCGCCAAGCTGCTAGCGTACACCTCCACCCATGGCACCAGCAACTGGACCTCCATTCCTCAGCGAGCAGGTCGTGA
Protein seq

MGRPLCCEKANVKKGPWTAEEDARQAASVHLHPWHQQLDLHSSASRS
Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_08g0102050 OsNip_08t0102050-00 Chr08 114259 114402 - RAP2018-11-26
CDS seq

ATGGGGCGGCCGCTGTGCTGCGAGAAGGCAAACGTGAAGAAGGGGCCATGGACGGCGGAGGAGGACGCGCGCCAAGCTGCTAGCGTACACCTCCACCCATGGCACCAGCAACTGGACCTCCATTCCTCAGCGAGCAGGTCGTGA
Protein seq

MGRPLCCEKANVKKGPWTAEEDARQAASVHLHPWHQQLDLHSSASRS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g32960 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os08g0102050 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0008590 SBH 0.0 0.0 0.982505
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0017200 SBH 0.083365 0.0 0.401045
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0017150 SBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0008590 SBH 0.0 0.046083 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0008510 SBH 0.0 9.145388 1.749045
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0008550 SBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0343800 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0016560 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0016830 SBH 0.168267 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0008120 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0017460 SBH 0.0 0.0 0.147865
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0016860 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G017020 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0017120 SBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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