Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_08g0008510 | OGI:08025760 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr08:9111222-9112814 | ||||||||
| Gene Symbol | OsMYB36a | ||||||||||
| DNA seq | acagctcaactcatcacattccatacccacatccatagcagcttcaagctaaggtgatactactacattcagatagaagaagcagagaaagagataagagattcagagagagactgagagagatggggagggcaccttgctgtgacaaggcaacagtgaagaaggggccatggtcacctgaggaggatgcaatgctcaagaactacattgaggagcatggcaccggtggcaactggattgcactgcctcacaagattggtaagcaattagtaccttttttacttatcagtgacagtttcagaagagattataaattctcagacatgctaagattgtcatctgtgcaaattgtgctcatcatcaagcttttcatgtgactgtttttctttctagaaatgttttcaaatgtatcttctggttttgtgtgttcatgtgtagttaatttagtttatgtgtgtaatgttgcagggctgaagaggtgtggcaagagctgcaggctaaggtggctgaactacctgaggccaaacataaagcatggggacttcaccccagaggaggacagcatcatctgcagcctctacattagcataggaagcaggtacataattacaccactaaccactctcccttctcactaactatcaatcaatcatcataatcacactaaacttgacataattaaccacaggtggtcaatcatagcagcacagctgccagggaggacggacaacgatgtcaagaactactggaacacaaagctgaagaagaggctccttggccggcgcaaggaccgcggcggcggcggccaccaccgcagccagagcaccgccgacgatcttccggccggcggtgacggcgccatgaacgacggcggcagcgagcggtcgctgagcgcgtcggcgatggagaggatccagctctgcatgcagctgcaggagctgcagaacccactgtccatccaccacaaccccttgctctctcatcagtggccaagcaaggccaCcattgatgatcagaatcacaacaatgtcactgtggctgagcatggaatgtcaagctctgtgagcgaccaccaccaccgcctcgatgggcagcagctggagagcggcgccggcgccgccgccgccatgcagcaggcgtcgccttcgagcggcggcgagaactccaacgtcgtcgtcgccatcgaggccgagctccaggagcttctctacgccggcggcggcgcgatcgtcgacggcggcgcgccgccgcagggggatgtggactggtggagctatgatcagggaaagcagtcacctgtgacttgctgggatttcacccctgaaaccagctccatcttccaggattatacaacagtttatgacatctgaaaattgtgaagaggtttgataaaggatgttaattagggaggtaataattataataatataaatagggattgtctagcctttgtgttctttgatcagtgacacctaaaaccaaactgtaaggagtttgttgtaagaaatttgtagcaagggataaataaaaaggtatggtaaaaaatatatataccaggtccaagagatgatgtaatcttggcaccattctgtc
More
|
||||||||||
| CDS seq | atggggagggcaccttgctgtgacaaggcaacagtgaagaaggggccatggtcacctgaggaggatgcaatgctcaagaactacattgaggagcatggcaccggtggcaactggattgcactgcctcacaagattgggctgaagaggtgtggcaagagctgcaggctaaggtggctgaactacctgaggccaaacataaagcatggggacttcaccccagaggaggacagcatcatctgcagcctctacattagcataggaagcaggtggtcaatcatagcagcacagctgccagggaggacggacaacgatgtcaagaactactggaacacaaagctgaagaagaggctccttggccggcgcaaggaccgcggcggcggcggccaccaccgcagccagagcaccgccgacgatcttccggccggcggtgacggcgccatgaacgacggcggcagcgagcggtcgctgagcgcgtcggcgatggagaggatccagctctgcatgcagctgcaggagctgcagaacccactgtccatccaccacaaccccttgctctctcatcagtggccaagcaaggccaCcattgatgatcagaatcacaacaatgtcactgtggctgagcatggaatgtcaagctctgtgagcgaccaccaccaccgcctcgatgggcagcagctggagagcggcgccggcgccgccgccgccatgcagcaggcgtcgccttcgagcggcggcgagaactccaacgtcgtcgtcgccatcgaggccgagctccaggagcttctctacgccggcggcggcgcgatcgtcgacggcggcgcgccgccgcagggggatgtggactggtggagctatgatcagggaaagcagtcacctgtgacttgctgggatttcacccctgaaaccagctccatcttccaggattatacaacagtttatgacatctga
More
|
||||||||||
| Protein seq | MGRAPCCDKATVKKGPWSPEEDAMLKNYIEEHGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGDFTPEEDSIICSLYISIGSRWSIIAAQLPGRTDNDVKNYWNTKLKKRLLGRRKDRGGGGHHRSQSTADDLPAGGDGAMNDGGSERSLSASAMERIQLCMQLQELQNPLSIHHNPLLSHQWPSKATIDDQNHNNVTVAEHGMSSSVSDHHHRLDGQQLESGAGAAAAMQQASPSSGGENSNVVVAIEAELQELLYAGGGAIVDGGAPPQGDVDWWSYDQGKQSPVTCWDFTPETSSIFQDYTTVYDI |
||||||||||
| Function | Transcription factor MYB36 [UniProtKB/Swiss-Prot:Q9FKL2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_08g0008510 | OsPr106_08g0008510.01 | Chr08 | 9111222 | 9112814 | + | NAM | ||
| CDS seq | atggggagggcaccttgctgtgacaaggcaacagtgaagaaggggccatggtcacctgaggaggatgcaatgctcaagaactacattgaggagcatggcaccggtggcaactggattgcactgcctcacaagattgggctgaagaggtgtggcaagagctgcaggctaaggtggctgaactacctgaggccaaacataaagcatggggacttcaccccagaggaggacagcatcatctgcagcctctacattagcataggaagcaggtggtcaatcatagcagcacagctgccagggaggacggacaacgatgtcaagaactactggaacacaaagctgaagaagaggctccttggccggcgcaaggaccgcggcggcggcggccaccaccgcagccagagcaccgccgacgatcttccggccggcggtgacggcgccatgaacgacggcggcagcgagcggtcgctgagcgcgtcggcgatggagaggatccagctctgcatgcagctgcaggagctgcagaacccactgtccatccaccacaaccccttgctctctcatcagtggccaagcaaggccaCcattgatgatcagaatcacaacaatgtcactgtggctgagcatggaatgtcaagctctgtgagcgaccaccaccaccgcctcgatgggcagcagctggagagcggcgccggcgccgccgccgccatgcagcaggcgtcgccttcgagcggcggcgagaactccaacgtcgtcgtcgccatcgaggccgagctccaggagcttctctacgccggcggcggcgcgatcgtcgacggcggcgcgccgccgcagggggatgtggactggtggagctatgatcagggaaagcagtcacctgtgacttgctgggatttcacccctgaaaccagctccatcttccaggattatacaacagtttatgacatctga
More
|
|||||||
| Protein seq | MGRAPCCDKATVKKGPWSPEEDAMLKNYIEEHGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGDFTPEEDSIICSLYISIGSRWSIIAAQLPGRTDNDVKNYWNTKLKKRLLGRRKDRGGGGHHRSQSTADDLPAGGDGAMNDGGSERSLSASAMERIQLCMQLQELQNPLSIHHNPLLSHQWPSKATIDDQNHNNVTVAEHGMSSSVSDHHHRLDGQQLESGAGAAAAMQQASPSSGGENSNVVVAIEAELQELLYAGGGAIVDGGAPPQGDVDWWSYDQGKQSPVTCWDFTPETSSIFQDYTTVYDI
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 9.145388 | 1.749045 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0248700 | RBH | 0.000000 | 0.0 | 0.924425 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g15020 | RBH | 0.000000 | 0.0 | 0.237597 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0248700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0008590 | RBH | 0.0 | 0.0 | 0.982505 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0008620 | RBH | 0.0 | 1.677541 | 0.497677 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0008720 | RBH | 0.0 | 3.432581 | 0.869957 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0008590 | RBH | 0.0 | 0.046083 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0142800 | RBH | 0.306883 | 0.6639435 | 0.3323485 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0008550 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0136700 | RBH | 0.59435 | 0.333574 | 0.504732 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0008090 | RBH | 0.0 | 0.187638 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0008290 | RBH | 0.0 | 1.588466 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0008120 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0008840 | RBH | 0.0 | 0.0 | 0.179431 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0008280 | RBH | 0.0 | 1.080802 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G008530 | RBH | 0.0 | 2.667370 | 0.549483 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0008320 | RBH | 0.0 | 4.683226 | 0.0 |
