Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0217300 | OGI:06016760 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:5952599-5963424 | ||||||||
| Gene Symbol | MADS55, OsMADS55, DLN163, OsDLN163 | ||||||||||
| DNA seq | GATGAGAATGACTAGCTTAATAATTGTGCCAATAATAAGTCTCAGCCGAGGTCACAAGTTTCCATACAGTTCCCATACAGGTACGTACATAACTTGCACGAATTAAGCGAACGATACATACGTACATGTCGCATTTAAATTAAGTGCGACGAAGGTAGTATGGTACACTAGTACAAGTTGAGAAAAAAAGATCCAAGCAACCGGACCATTGCATCAGCAGGCATAGGATGACAAGTCAATCGATCTCCTTTTTAACATAGGATAGGATTATTGCAGCCTTGTTGGTAATCTCATAGCATGACATCTTCTTGATCTTCTTAAGATGCATTTAACTTCCAACTTCATCCACTCATGCACACAGACAAATAATTCATGGTGGTCGTCATCCCATTTCTCAGCTCTCTAGCTGGTCCTTTTATTTCAAGGCAACCTGAAGATATCAATTTTTTTAAGAGAGAATGGATTAAACCGGTCTCTACATCCAAACACAGCCATCCAATATTTGCGCTTATGTTGAACAGCACAAAGAAATAAGTTACATGAGGAAAATAAATTCGCTTGGTAACTTAACACCCTTGAAGGAGAACACAACACATTCAGAGTACATAGTTCTGATCGATCTCAGGTTTAGGGGGGCACGAATCAAGTAATAAAAAGGGCATTATTTCAATCAATAATTCATAGTTCTTAAGTTGATTTTCTTTGTCGTTTATCCCTTAGTGCAGTTTTCATTTGGATTTAGTGTGAAAATGGATACCATCTGCAGGGAAAGCTTACCTGCCGGGACCAACTAGCTAGTAAAAGATCAAATCCTTAAGTATATTAAAAACTAATTGAGTTCTGGGAAAAGATCATGATATCGTATTCAATCGTCTAGAAAGAATTTAAATTTCGTTTTATCATGTTCCAACAGAACGAGCAGAATTATTAAAATTGTCCCATCTGAGAAAATTTAAATTAGCTACAAAGAAGCGACAAGGGTTCCAGCGGAAACTCACCCTAGTTTCAGGGATATATCAGAACCATCATCATTATCCTGCGAGCTTCCCGAATTTAATGCAGTCATCACAGATTCAGATGATTGTCCATCTTCAGTAAGAACATTTTCAGTATCAGGAACCGCCAAGCCAGCAGTAGGCACCTGAGGCATCTGCATACAAGCAAATGCACAGAATATAAATGCATATTCCGCCGTGCCTGATATGGAGAAACCAAAGGGTCCTCGAATTTGCATTTTATTTTGTAAAACTATGCAAATATTTCGAACGCATATACACAGTATGTATTAATTACTTGGTCTCTGAGGCGCATATTCTCTTCTGCCAGCTGAATGCCCTACAAGAACAAATAAATTGTATCATAAGATTTGTGAAATTATACCTGATTCATTTTCAAAACCAACCAAATCAATTTTACGTTTTGTGCTGATAAATACAAAATATTATATCCAGACATAAATGTTTTACGTTCATACAAAATTTTATCAAAATTTTGTAATTCCGACAATCAGTTTTGTATTAGAATAAATTTATGAAATCTAAAAGGTTATTTTTAAAGGTAAATCCATATATATCATTTCTTTTGTTTTTAAACTAAACATTTGAGAATCTCAAATTATTGATGGTCAACTTTTTAAAAGATTGACTGAATCTTATCCTAAACATTAAATATTTAAGAGCAAAGGGAGTAAAATTCTATTCTAAATGTAATCCTTAGTTGCATTGTTGGATATCGGTGAAAATATCAATTTCTAAATAAATAATACTCCTCATAAGCCTCACGAGAAAGTTTACTGTATCTGAAAATCTATGCATAAATAAACAGGAAGCTGCTGAATGATAACATTTCCATCCAATATATGTCGAGAAAACATTTCATGCCTGAAAAATTGTGCAATAAGTTCACAACAAAAATTGACTCTCGTACAGAGATCCTATCGAACCTCAGCATTTCATTGACAGTCTATTATTGATTTATTGCCATCGTATACCGTCTGCAAGCAACATTCCAATATAGTACATGCACATGTTTCACTCGTCAATATAATTTTTGCTATATATAATAATTTTTGCTATATATAAAGTTCCGGCACTGAATAGTGAATATTAGTACCCTTTAGCTAGTTCTCGACTTCTAGTCACCACTACAGAATGGGACATCGGTGACGGGCCATCTGTAGAGGGTCAAAGTGACCCATCTTTGATGACCTCATCTCCAACTGGAAAAAAAAACTTTAAGATACTACTACATGGGACAATGGGTCAAAGTATGAACTGTAAATAAAGATCAACCATGATGACCCCGATGTGATGGGTGTGGTCATATGAACCGCCACAAATGATAAAGACATCTCAGCGTCGGTGTTAGTAACACATGTTTAGGATGAGCTATCATCTCAAATGGGCTTAATTTTCGGACCGCCACAGATGACCCTACTACAAAGTATACGACCACTCTCTCACTCCCAAATCCCCAAGTGTCGACTGGCACCTCCTTCATCCTTAAGCGTCGGGCACCACCTCATGGACTAGTGGCCTCCCCAAGGTCGGGGGACGCCGGATTTGACCACAATCAACCTCGTGCATGTTGGCTAGATCCCGAGCGTTAGCCGCCGTCTGCTCCACCCCAAGGGCTGGCCGCTATCTCCTCCACCCTTTAGCATTGGACATTGCCTTAGGGATGCTACATCCAACCTCCCCAAGGTCGAGGGACGTTAGATCTGACCACTCTCACCTCGTGGTGGCTAGATTCAACCATAGTTATTGAGACCGGACTGGTAATTGAACCAGTGAGGCTCTCGTTTTGATGATTTATTGGTTCAACCAGTTAAACCACTGGTTTGAAGCGGATCAATGCAATTTAAATAGATAGGTTATTCTTTCAAAACACAAGGTGCATCGTAGCATGCTGGTCGTTTGGTTTGCTTCTATGCATGTGATCGTGGGATCGAATCCCACATGCGTACTTTTTCCCACATTTTCCCTCTCCAACAGCCTCCAGGACGCATGTGACCTTGCACAAGGCAATCCTTGGTGGTTCAATTCCAGTTCAATAGCAATTTTTCTACAAAAACGGGTGACCCAACCGGTTTCTACCGGGTCAATTGCGCAAACGGTCTTTTAGCTGGACCAAACTGGCGGAGGCTCTAGTTCTAGTTTTTTCGGTCCAACCACCGGTCTAGTCCAGTTCCAATAACTATGGATTCAGCCACCTGAGGGAAGATGATGATGGTGACATCGACAAGCAGCCGTGCACCACGATGACAGGAATAGTACAGTGACAAGAAGCTGCGCGCGGGACGGGGATAGTAGAACAATAAGAGCCATGGCACGGAAATGATGGCGGCGTGGCGACAAGCACAACCTTTTTGGATTTTTTTGGCCAAATTTCCCTATCATAGTCATGGCAATTTTGGCCTTTTTTGTGCAGAATTTTCCTATCTGTGATGGGTCACAACTTGTAGACCGTTACATATGATTTCATCATTAACGGGGGTGTCATTCTCACCACTGACCAATAGTTAAATGTCGGGTTGCTCACCCAACCCGCCGTTGATAGTCTTTCTGAACCATCAGAGATGACCCGTTCTCTAGCAGTGTGTCCTCCCTAGAAATACTCCAAAAAGCATATCATATTGACATCTTCAGAATTAGTATATTGTTGTATGTCATATTGTAAACTTCCACTAATTTAGCGCCATTTTATACAAGTTTCTTGCAACTGGCTACACTGCATAGTTTTTGCCGTACACTCACTACTACAAAACCATTAATTGAGGACACCCTCATGTGCTGGTCATCTAAAACCAGCACATGAGGTATATATTTCCTATCCTCCCAAAACCCGCACATGGATTAAATATTGAAAACCAGCACCTATCACCCCTTATAGGTGCCAGATTATTAAAGAAAATCAATCGATACATAAAATATATGTACCGAATTTTTTAATAAACCAAAACTTATAATGTGGATATAATTGCTAGTTTTAACAAAAACACAGCACTGTTAAGGATGCAGCCGAGCCAACAAAATGTGGGACTGTGGGAGCCCACCTCGATTTATTAGGTACCTCTCGATCTTATCTCCCTGACTCCATCCCCAACACACCATCCTTTCTTCATGATCTTTATCTCCCTAGCCTTCTCTCTTCTCGAATGACACGCCGGTCCCCTCGGCCGTCTGCCTCCTCTCCCCTAGCCTATGGGCAGCACGGCCACCTCCTCTCCCCCAAGCCGACAAGCGACGGGGCTGCCTTCTCTCTCCCCAACTCGTGAGTAGTGGGGCCGCCCTCTCCCATAGCCTTTGAGCGGCGCAGCTGGCTCCTCTCTACTTAGCCAACGAGCGGCGTGGCCACGTGTCCTCTCCCCCAAGCCGGCGAGCAATGGCCTTGAGGTCCTTGTTGACCTCTACCAGATCTGATCATCCGCGAACACCAACCGTGCCTCATGGAGTTCCTCGCTAGTCACCACGCCTCCATCTCCTGATCCTACTGTTCGCTGCTCGGGAGCAGCCAAATCCAGCCACCTCCTCTCTGCCAAGCCGGCGAGCAGTAGAACTAGAGATCCCCGGGGGACAAATCTGGCTTGTATGGTGGTGGGCGAGCAAGCAGATTTCACCTTCACCCATGGTGAGCAGCAACGGGGATGGCGACCTTCTCTCCAGTGAACCTCCTCATATTATTGTTGTTGATTCTGTGAGTTTGTATGTTAATGATTTCTAATGTCAATCGAGCTCAGAGACGACCTTGTTCTTGGATGTTATTATGTGTGTTTGTTCTTGGATGTCAATCAAACCTTGGGGGCTATGGGGAACGCTCAAAGCATCGGCTTTGGTTCGAGCTGATGCATCAAGCCAGTTTTAGTTTTTTTTATTCGTGACACCTCAAAGGTACCGGTTCCTATACTAGCACTTTTGATTCTCCCCATCAGTGCCTCTAATAGGGTGCCAGTTGAAAAATCCAACACCTATGGGGGTTCTCAACTGGCACATATTATGGGTTCTGTACTAGTGTCTTGTTGTATTAATAATCATCTTTATCACCAATATATCTATAACAGTACAACAATGACAATAAAACATCTACAAAACCTATTTTCACTCGGTTAAATTTATACAACTGACGGTAATTAAGTTGTGACTAACTTTTTTTTTCCTCTAGGATCTAGCTTATTAGCTGCTTACAGGGACACAGAATTTTGAGAACCCATAGAGAATTACTAGCTATGATTCAAAATACCCTTAACTAGACTAACATGTTTGGCAGACAATAGTGAAATCAATGTAATTAAGGACATTATTACGAGGTTAACAAAAGTAACTAGTGGAATCTAATCATTTTGTTTACCTTTCGTTGGAGCTCACTGATTTCTTGCATGAATTGCTGGTCCTGCATAAGCATATATTGATTAGTTGTCTGAAAAACTTGATATTGTGCCTGCCAATTCATACGAAGCTGAAAAGGGAACACCATCGGATGACACCCAACCTTTGTACAGAGCACCCGCTGCAGTCCTGCCTCGAGGTTCTTTTCCATCTGCTGCAGCTCTTCCACACTCAATCCCTCAAGCTCCTCACCTCTCATCTGTCTATAAATGTGGAATTGTGACATTATCAACTTATAATACGGGCTATTTCTGTTGCAAACAATTTTGTGATATATCGAAATAATAAAATCAATATGGATCAGAACATAATTAACCTAAGTTGAAGACTTGCTTCTGCCAGTTGTTCATTCAAACTGCTACACTTGCTGTGCTCTAACTGAAGAAGAAGGTGAATATATGCATAACTGTTAGTATATGTACGAAGCAATATAATTAAGAAGAAGGCTAGTTACAAAGACAATTTCTATGAGATTCTTGCATTTATATTCCTAGGTTAGAGGACATATAAATGTGTGGAGTTAGTACTTTATGTCACTTTTCTTTGCAGATCCAGGATATTAAATAGTGTCTCACATTTACATTAATTACATGGTCTTATTTTCATTAAGAGCAGGTACAATAGCAGGCTATTAGCTAGCTGTAAACATATTTTAATGAGATAAAAGATGAGAGAGAATAGCAGCGGGCTACAGATCTATAGCCAGCTGCAGCGCAGACTCCAAGACGTAATGTGTGCATGACAGGTGGGACCATATATTAATAATATAGTAAGCAATTATTGTATGAATTGGCTATTAGATTGATTATATATGAATTAGAGATAGTAGCGGGCTATACTATTAAACTTGCTCTAAGCTTGCATCATCATATGAAGCGCGCACTTCTACAAGTTTGTGGACATCGTTGTTGTGCTCTAAACTCATGAAAAATTTAATGGTGCAGAGATCATGCTTTTGAGTTAATATGGGGAACCTATAAAATACTCAAAAATGAAACTAGCACACATATATATATATATATATATAATGTAAAAAAAACAACATGCTACTGATCCAATCGTTTATAAGTTGGTACAACTAAGGCTGCAATCCGTTACAACTGTAGATCGAGTAATAACCTAGCATGATTTTTTTTCTTAATCTAACCATTTTCTTTAAAAAAAATCCCTGTTTGGGAAGACAAAAAATAAGTGAGAAGATTTCTGCACCCTCCACTACTGTCCTAGTTAATTAATTTAAGAATATTTTCATTATATGAGTGGGTAAAGTTATACCTTTACATGTGTAACTAATTTCTTAATTAAGCATAAGCAACTAGCTATAAGAGCAGGTACAATAGCAGGCTATTAGCCAGCTGTAAACATATTTTAATGAGATAAAAGATGAGAGAGAAGAGCAGCAGGCTACAGATCTGTAGCCAGCTGCAGCACGGACTCCAAGACGCAATGTGTGTATGATAGGTGGGACCACATATTAGTAGTATAGTAAGCAACTATTGTATGAATTGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGTGGGCTATACTATTAAATTTGCTCTAAAGAACTAAACATAGTCAGCAGAACTGTTTGCAGAAAAAAAAAGTGCTGTTATCATTGCATGTTGACTTATGCATGTATATAAATATATGAAACATTACACCACATATGATCTAATACTAGTTAGTACAAATCCACTTATGATTATGAACTACAAAACACAGAGATTGCTTTACATACATTCAGATCAATAGAAGGCTGCTTATCTGTTTTCCCCAGGTTCTTTGAATGTGTAGTATACTTGTCAATGATCTCGTTCATACTGCTTGACCAAAGAAAAATACCAATAATCAGTATTTGCACCAAGCTGCCTATACATGCGGTATCTATAAAATACATGTCTTCAAGCAAGGTTTTGTAAATTGACTTCAAAGGGGTTTGAACTCTGAAGATATAATAATAATGTATATCTAATATACAAAACCATCTATAGTCTAACACCTTCAAGTACAGCCTCTTTAATAAGAGAATAAATCTTAATTATTTGTTACTAGTTACGCTGAAAATTGGTAAGAGATTCTGCGAGCATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCAATTATCATATCATATCATGTTCATATATATCAATGGAAAATTAAACTCTATATATGATTGTCTAAAGCACTCTGAATTTAATCTAATATAATGCATTTTTTTTGTTTCTTCTGTTATTGTCTATAGGAATCCCATATTCAAAAGAGGGTAACATGAAGGAAACCAGTCAGACACCACTCAAGTACATATTGTTTATTGTTGTCAGATGAATTCTGGCCCATTGGTCTAAACTACAATGCATATTTTTCTCAGGAAAAAAACATAAGCATATATAAAGAATATACTACGTACGTATTGCTTAATGGTTGGAACCTAATTCTAGAAGTAAACTTCAATTTGAAACCCTGGGAATTGGGATTGTTGTGTAATCATAATATAAACTGCGTTGGACTAACACTTGCACAATATTTTATATCCTTTCAAAGGGGTGGAAAAAGATAGCTTTGGATGTTCTCCAAGAAGATGTAGCCAGCCAGCCAAGGATATGCTGAGCTTGTGTAGAATTCATACATTTCTGCTAGAGTTATGTGCTACTCGTAATACGCATGCCCATGTTTAAAGTACATTTTGATGTCTTCATCATATATGCTCTTAGTAATAATGTCAGCAGAATCACTGATCTTAAATTATAACAGTGTGCATAGTTTCTTATCTGACTTAAGGTTGTCCAGTGATTTCTGTTCAACGTTTTGTAGAAAAAAATTAAGTTATATAATATAACTCCCACCGTTCTCAACTAGGATACAGTTTAGCAGCACGCACTTGAACTTACAAAAACTATGGCACTAATCTAGTAATATGTGCACAAAAGTGTAAAGTTCAGTCATGTAAGAAAATTAGAAATGCCACCAGTAGGTTTTGATGATATGAATTGTCCCTCTTGTACAATAATTCCTACTGAAATACATACTGAATATATAGGTGCCATAAAAAAAACTATGCCAAGGTCTTTACGTTCTCGATCAGTGCAATTGGGCATGGAGATCGAAAAGACCAGTTTAATTACCAGGTCTTCGTTAACATTTGCCCTTCTGAAAATTAACTTCACCTCAATAAATGCTATGTTACTCCTATTTAATTGTTGTCTGATAATTGTTCACTCAAATAGTATCATAGCGGAATGATCTTTTCCTCGTACATAATGGAGTTGTACGTTGATGGAGAAATAACGAGATGACAAATTGTAGGGAAGAAAAACTAGAGAGCATGATATTGGGCATATAATAGATAAACAATTATACTTAGCGGCTTGGGACATAAGATTGTGAAAGATAATGGTCTTAGCGTCTTAGGTGTATTGTAGAACTGTGTAGATGTTCCAAATGATAAGTAGAAAAAAGTATATAAAATGAGGACCCTAAAAAAGGAATAGTGGAGGAATAGTGTAAAGTTTATGAGGTACTACGACCTTGATCTTCTCACCTTCATTGTTAGTTACACAAAACACATAAATGACACGAGATTATTCTATTATAAAGTTCATGGCATGGTTCTAATTATAAGAACGAAACAAGTTATCATGAACTATATATCAAGTTGTAAATTACAAGCATCAAATATTAAGTTACACCCAAGGACAGTACGTTCCAAAAGAAGAACGCACAGTTCCATTATTTTTGGGAAAGAAGCACCCATATGCAGTCAACTATATAGGCACATAAAAAAATCACACAGAAATTAAACAAAGGAGCTTCAGAAAACGTGCATACAATTATGTTCTCTGATGCATGCGCTCAATCCCTAAATGATGCAATTATATTCTTAAATAGCTTCGACTGCCAAAAAGAAACTGATCAAGATCGATCACACTCTTAAAATGGAGTACCGTACTACTCATCATTATATTAATTAATTAACCCCCTTCTCTTTGGGCATGCTTATATGCGTATAGTCCTACTATACTAAATTAACCCTTTTTTTTCTTGGACGACATACTTATATATGGAACATGCAAAGGCCACGTACCCTCTTGGTACTTGAAATGTTTATTTTTCTCTCTTGGAGAACACCAATAATGGTAAGCTAGCAAGCCCAAATACCCAAAGGCTACAAGAGTGATCCCATATATAGCTATAGCTACAGCAAAGTACCAGCCGGCCACCTGCGCAGACCACGAGAGAGAGAGAGGCAGTAGGAGAGGATGAACTGATCGGCAGCTGGTTCGTTGGTTGGTTGGTTGACGGCTCATGCATACGGCATGCCATGCCACACCACACATAAAATCACAGGTACGGCGGCGCCGCGATTAGCGGAGGCGCCCAAGGCCGCGCGCCGCGCCGATCGGTTTTGGGATTTATTTTTTATCGAGCAGCGTACGTAAGCAAAATTAACCGGATTTTAGAGTGTTCCTCTCCACATGAAAGCAAATGGAATACACGAGAAATATGCATATCTCTCATCTGCAAAAAGCAAGCGATCGAATTTTCCCCGTACTTAGCTGTGGAGATTGTGATTGAAACTACAGTAGAAAAATTCCCCATTTTCGGAGGACCATCCCGGGTGGTAGAATCCACCGGAATCGACCCAGGAATCAGCCCCAAAAACCGCAAGGATGATTGTTCTGGAAGTAGAAAAGAAGGCTCGATCCCGAAGTGGCGTTTCGCGAGAAGCATCGCATCAACCAAACACAAACCCTAAAACCGAAGAAGTAAAACTGTAGAAGAGGGAGGAAGCCCTAGCGACCGGGAGGATCTGGAGCCCTTTCAAACGAGAGAGGAACACAGCAGCAGGTAGCTAGATCTAAACCCCCCAAAAAAATCTCGAGCGGATCGAAAACTAAAAAAAGGGTGAGATCATCGGGTGAGCAGTAGCAGCATCAACAGTAGAGAGAGAGAGGGGATCAGAGAACGCGCTTACTTGGAGCTGGCGAACTGGGAGAGCTTGCCGGTGGAGGAGAAGACGACGAGCGCGACGTCGGCGTCGCACAGCACCGCCAGCTCCTCCGCCTTCTTGAACAGCCCCCGCCGCCGCTTCGAGAACGTCACCTGCCGCGCCGCCGCGCTCTCTATCCTCCGTATCTCCCTCCTCTCCCTCGCCATCTCCCTCCCCCCTCCCCTCCGATCAACCACCACCCCCTCCTCCTCCGCGACAGAAAACTCCGACGAAATCCAAGCAGATTCACCCGCAACAACAACAGCACAGAGAGACAAGGAGAGAGAGAAACGCGCGCCGCAGCGGCGGGGTGCGCCTAGTATATAGCCGCGGCTCGCCAATGGCGAGGCGAGGCGAGGCGAGGAAAGAGAAAGAAAGGGATGTGGCCGCGCGCGGCGCCTCCGATT
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| CDS seq | ATGGCGAGGGAGAGGAGGGAGATACGGAGGATAGAGAGCGCGGCGGCGCGGCAGGTGACGTTCTCGAAGCGGCGGCGGGGGCTGTTCAAGAAGGCGGAGGAGCTGGCGGTGCTGTGCGACGCCGACGTCGCGCTCGTCGTCTTCTCCTCCACCGGCAAGCTCTCCCAGTTCGCCAGCTCCAATATGAACGAGATCATTGACAAGTATACTACACATTCAAAGAACCTGGGGAAAACAGATAAGCAGCCTTCTATTGATCTGAATTTAGAGCACAGCAAGTGTAGCAGTTTGAATGAACAACTGGCAGAAGCAAGTCTTCAACTTAGACAGATGAGAGGTGAGGAGCTTGAGGGATTGAGTGTGGAAGAGCTGCAGCAGATGGAAAAGAACCTCGAGGCAGGACTGCAGCGGGTGCTCTGTACAAAGGACCAGCAATTCATGCAAGAAATCAGTGAGCTCCAACGAAAGGGCATTCAGCTGGCAGAAGAGAATATGCGCCTCAGAGACCAAATGCCTCAGGTGCCTACTGCTGGCTTGGCGGTTCCTGATACTGAAAATGTTCTTACTGAAGATGGACAATCATCTGAATCTGTGATGACTGCATTAAATTCGGGAAGCTCGCAGGATAATGATGATGGTTCTGATATATCCCTGAAACTAGGGTTGCCTTGA
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| Protein seq | MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSGSSQDNDDGSDISLKLGLP |
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| Function | MADS-box transcription factor 55 [UniProtKB/Swiss-Prot:Q69TG5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0217300 | OsNip_06t0217300-01 | Chr06 | 5952599 | 5963309 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGAGGGAGAGGAGGGAGATACGGAGGATAGAGAGCGCGGCGGCGCGGCAGGTGACGTTCTCGAAGCGGCGGCGGGGGCTGTTCAAGAAGGCGGAGGAGCTGGCGGTGCTGTGCGACGCCGACGTCGCGCTCGTCGTCTTCTCCTCCACCGGCAAGCTCTCCCAGTTCGCCAGCTCCAATATGAACGAGATCATTGACAAGTATACTACACATTCAAAGAACCTGGGGAAAACAGATAAGCAGCCTTCTATTGATCTGAATTTAGAGCACAGCAAGTGTAGCAGTTTGAATGAACAACTGGCAGAAGCAAGTCTTCAACTTAGACAGATGAGAGGTGAGGAGCTTGAGGGATTGAGTGTGGAAGAGCTGCAGCAGATGGAAAAGAACCTCGAGGCAGGACTGCAGCGGGTGCTCTGTACAAAGGACCAGCAATTCATGCAAGAAATCAGTGAGCTCCAACGAAAGGGCATTCAGCTGGCAGAAGAGAATATGCGCCTCAGAGACCAAATGCCTCAGGTGCCTACTGCTGGCTTGGCGGTTCCTGATACTGAAAATGTTCTTACTGAAGATGGACAATCATCTGAATCTGTGATGACTGCATTAAATTCGGGAAGCTCGCAGGATAATGATGATGGTTCTGATATATCCCTGAAACTAGGGTTGCCTTGA
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| Protein seq | MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSGSSQDNDDGSDISLKLGLP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0217300 | OsNip_06t0217300-02 | Chr06 | 5952599 | 5963424 | - | IsoSeq | ||
| CDS seq | TCGGAGGCGCCGCGCGCGGCCACATCCCTTTCTTTCTCTTTCCTCGCCTCGCCTCGCCTCGCCATTGGCGAGCCGCGGCTATATACTAGGCGCACCCCGCCGCTGCGGCGCGCGTTTCTCTCTCTCCTTGTCTCTCTGTGCTGTTGTTGTTGC |
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| Protein seq | SEAPRAATSLSFSFLASPRLAIGEPRLYTRRTPPLRRAFLSLLVSLCCCCC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr06 | 5959813 | 5963003 | - | OsNip_06t0217300-02 | OsNip_06t0217300-02,OsNip_06t0217300-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.735087 | 2.299129 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0761000 | RBH | 4.803098 | 3.922697 | 5.076305 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g11330 | RBH | 0.388603 | 0.459099 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0217300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0008050 | RBH | 0.726337 | 46.017609 | 1.444158 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0007900 | RBH | 0.105559 | 3.798221 | 0.485569 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0007910 | RBH | 2.108772 | 39.608578 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0008030 | RBH | 0.0 | 0.951396 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0007910 | RBH | 2.567871 | 14.319452 | 3.623377 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0099700 | RBH | 0.78972 | 1.631578 | 1.4769855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0007640 | RBH | 0.195862 | 0.922146 | 0.101269 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0099700 | RBH | 0.949544 | 1.206478 | 2.153837 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0008090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0007920 | RBH | 0.0 | 7.438876 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0007980 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0008050 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0007830 | RBH | 0.170354 | 9.173059 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G007750 | RBH | 1.330399 | 1.752288 | 1.547611 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0008020 | RBH | 4.297329 | 9.830177 | 1.923259 |
