Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_06g0008050 OGI:06016760 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr06:6166725-6177597
Gene Symbol MADS55, OsMADS55, DLN163, OsDLN163
DNA seq

GATGAGAATGACTAGCTTAATAATTGTGCCAATAATAAGTCTCTTCAGCTGAGGTCACAAGTTTCCATACAGTTCCCATACAGGTACGTACATAACTTGCACGAATTAAGCGAACGATACATACGTACATGTCGCATTTAAATTAAGTGCGACGAAGGTAGTATGGTACACTAGTACAAGTAGAGAAAAAAAGATCCAAGCAACCGGACCATTGCATCAGCAGGCATAGGATGACAAGTCAATCGATCTCCTTTTTAACATAGGATAGGATTATTGCAGCCTTGTTGGTAATCTCATAGCATGACATCTTCTTGATCTACTTAAGATGCATTTAACTTCCAACTTCATCCACTCATGCACACAGACAAATAATTCATGGTGGTCGTCATCCCATTTCTCAGCTCTCTAGCTGGTCCTTTTATTTCAAGGCAACCTGAAGATATCAATTTTTTTAAGAGAGAATGGATTAAACCGGTCTCTACATCCAAACACAGCCATCCAATATTTGCGCTTATGTTGAACAGCACAAAGAAATAAGTTACATGAGGAAAATAAATTCGCTTGGTAACTTAACACCCTTGAAGGAGAACACAACACATTCAGAGTACATAGTTCTGATCGATCTCAGGTTTAGGGGGGCACGAATCAAGTAATAAAAAGGGCATTATTTCAATCAATAATTCATAGTTCTTAAGTTGATTTGCTTTGTCGTTTATCCCTTAGTGCAGTTTTCATTTGGATTTAGTGTGAAAATGGATACTATCTGCAGGGAAAGCTTACCTGCCGGGACCAACTAGCTAGTAAAAGATCAAATCCTTAAGTATATTAAAAACTAATTGAGTTCTGGGAAAAGATCATGATATCGTATTCAATCGTCTAGAAAGAATTTAAATTTCGTTTTATCATGTTCCAACAGAACGAGCAGAATTATTAAAATTGTCCCATCTGAGAAAATTTAAATTAGCTACAAAGAAGCGACAAGGGTTCCAGCGGAAACTCACCCTAGTTTCAGGGATATATCAGAACCATCATCATTATCCTGCGAGCTTCCCGAATTTAATGCAGTCATCACAGATTCAGATGATTGTCCATCTTCAGTAAGAACATTTTCAGTATCAGGAACCGCCAAGCCAGCAGTAGGCACCTGAGGCATCTGCATACAAGCACATGCACAGAATATAAATGCATATTCCGCCGTGCCTGATATGGAGAAACCAAAGGGTCCTCGAATTTGCATTTTATTTTGTAAAACTATGCAAATATTTCGAACGCATATACACAGTATGTATTAATTACTTGGTCTCTGAGGCGCATATTCTCTTCTGCCAGCTGAATGCCCTACAAGAACAAATAAATTGTATCATAAGATTTGTGAAATTATACCTGATTCATTTTCAAAACCAACCAAATCAATTTTACGTTTTGTGCTGATAAATACAAAATATTACATCCAGACATAAATGTTTTACGTTCATACAAAATTTTATCAAAATTTTGTAATTCCGACAATCAGTTTTGTATTAGAATAAATTTATGAAATCTAAAAGGTTATTTTTAAAGGTAAATCCATATATATTATTTCTTTTGTTTTTAAACTAAACATTTGAGAATCTCAAATTATTGATGGTCAACTTTTTAAAAGATTGACTGAATCTTATCCTAAACATTAAATATTTAAGAGCAAAGGGAGTAAAATTCTATTCTAAATGTAATCCTTAGTTGCATTGTTGGATATCGGTGAAAATATCAATTTCTAAATAAATAATACTCCTCATAAGCCTCACGAGAAAGTTTACTGTATCTGAAAATCTATGCATAAATAAACAGGAAGCTGCTGAATGATAACATTTCCATCCAATACATGTCGAGAAAACATTTCATGCCTGAAAAATTGTGCAATAAGTTCACAACAAAAATTGACTCTCGTACAGAGATCCTATCGAACCTCAGCATTTCATTGACAGTCTATTATTGATTTATTGCCATCGTATACCGTCTGCAAGCAACATTCCAATATAGTACATGCACATGTTTCACTCGTCAATATAATTTTTGCTATATATAATAATTTTTGCTATATATAAAGTTCCGGCACTGAATAGTGAATATTAGTACCCTTTAGCTAGTTCTCGACTTCCAGTCACCACTACAGAATGGGACATCGGTGACGGGCCATCTGTAGAGGGTCAAAGTGACCCATCTTTGATGACCTCATCTCCAACTGAAAAAAAAACTTTAAGATACTACTACATGGGACAATGGGTCAAAGTATGAACTGTAAATAAAGATCAACCATGATGACCCCGATGTGATGGGTGTGGTCATATGAACCGCCACAAATGATAAAGACATCTCAGCGTCGGTGTTAGTAACACATGTTTAGGATGAGCTATCATCTCAAATGGGCTTAATTTTTGGACCGCCACAGATGACCCTACTACAAAGTCCACGACCACTCTCTCACTCCCAAATCCCCAAGTGTCGACCGCCACCTCCTTCATCTTTAAGCGTCGGGCACCACCTCATGGACTAGTGGCCTCCCCAAGGTCGGGGGACGCCAGATTTGACCACAATCAACCTCGTGCATGTTGGCTAGATCCCGAGCATTAGCCGCCGTCTGCTCCACCCCAAGGGCTGGCCGCTATCTCCTCCACCCTTTAGCATTGGACATTGCCTTAGGGATGCTACATCCAACCTCCCCAAGGTCGAGGGACGTTAGATCTGACCACTCTCACCTCGTGGTGGCTAGATTCAACCATAGTTATTGAGACCGGACTGGTAATTGAACCAGTGAGGCTCTCGTTTTGATGATTTATTGGTTCAACCAGTTAAACCACTGGTTTGAAGCGGATCAATGCAATTTAAATAGATAGGTTATTCTTTCAAAACACAAGGTGCATCGTAGCATGCTAGTCGTTTGTTCGCTTCTATGCATGTGATCGTGGGATCGAATCCCACATGCGTACTTTTTCCCACATTTTCCCTCTCCAACAGCCTCCAGGACGCATGTGACCTTGCACAAGGCAATCCTTGGTGGTTCAATTCCGGTTCAATAGCAATTTTTCTACAAAAACGGGTGACCCAACCGGTTTCTACCGGGTCAATTGCGCAAACGGTCTTTTAGCTGGACCAAACTGGCGGAGGCTCTAGTTCTAGTTTTTTCGGTCCAACCACCGGTCTAGTCCAGTTCCAATAACTATGGATTCAGCCACCTGAGAGAAGATGATGATGGTGACATCGACAAGCAGCCGTGCACCACGATGACAGGAATAGTACAGTGACAAGAAGCTGCGCGCGGGACGGGGATAGTAGAACAATAAGAGCCATGGCACGGAAATGATGGCGGCGTGGCGACAAGCACAACCTTTTTGGATTTTTTTGGCCAAATTTCCCTATCATAGTCATGGCAATTTTGGCCTTTTTTGTGCAGAATTTTCCTATCTATGATGGGTCACAACTTGTAGACCGTTACATATGATTTCATCATTAACGGGGGTGTCATTCTCACCACTGACCAATAGTTAAATGTCGGGTTGCTCACCCAACCCGCCATTGATAGTCTTTCTGAACCATCAGAGATGACCCGTTCTCTAGCAGTGTGTCCTCCCTAGAAATACTCCAAAAAGCATATCATATTGACATCTTCAGAATTAGTATATTGTTGTATGTCATATTGTAAACTTCCACTAATTTAGCGCCATTTTATACAAGTTTCTTGCAACTGGCTACACTGCATAGTTTTTGCCGTACACTCACTACTACAAAACCACTAATTGAGGACACCCTCATGTGCTGGTCATCTAAAACCAGCACATGAGGTATATATTTCCTATCCTCCCAAAACCCGCACATGGATTAAATATTGAAAACCAGCACCTATCACCCCTTATAGGTGCCAGATTATTAAAGAAAATCAATCGATACATAAAATATATGTACCGAATTTTTTAATAAACCAAAACTTATAATGTGGATATAATTGCTAGTTTTAACAAAAACACAACACTGTTAAGGATGCAGCCGAGCCAACAAAATGTGGGACTGTGGGAGCCCACCTCGATTTATTAGGTACCTCTCGATCTTATCTCCCTGACTCCATCCCCAACACACCATCCTTTCTTCATGATCTTTATCTCCCTAGCCTTCTCTCTTCTCGAATGACACGCCGGTCCCCTCGGCCGTCTGTCTCCTCTCCCCTAGCCTATGGGCAGCGCGGCCACCTCCTCTCCCCCAAGCCGACAAGCGACGGGGCTGCCTTCTCTCTCCCCAACTCGTGAGTAGTGGGGCCGCCCTCTCCCATAGCCTTTGAGCGGCGCAGCTAGCTCCTCTCTACTTAGCCAACGAGCGGCGTGGCCACGTGTCCTCTCCCCCAAGCTGGCGAGAAATGGCCTTGAGGTCCTTGTTGACCTCTACCAGATCCGATCATCCGCAAACACCAACCGTGCCTCATGGAGTTCCTCGCTAGTCACCACGCCTCCATCTCCTGATCCTACTGTTCGCTGCTCGGGAGCAGCCAAATCCAGCCACCTCCTCTCTGCCAAGCCGGCGAGCAGTAGAACTAGAGATCCCCGGGGGACAAATCTGGCTTGTATGGTGGTGGGCAAGCAAGCAGATTTCACCTTCACCCATGGTGAGCAACAACGGGGATGGCGACCTTCTCTCCAGTGAACCTCCTCATATTTTTGTTGTTGATTCTGTGAGTTTGTATGTTAATGATTTCTAATGTCAATCGAGCTCAGAGACGACCTTGTTCTTGGATGTTATTATGTGTGTTTGTTCTTGGATGTCAATCAAACCTTGGGGGCTATGGGGAACGCTCAAAGCATCGGCTTTGGTTCGAGCTGATGCATCGAGCCAGTTTTAGTTTTTTTTATTCGTGACACCTCAAAGGTACCGGTTCCTATACTAGCACTTTTGATTCTCCCCATCAGTGCCTCTAATAGGGTGCCAGTTGAAAAATCCAACACCTATGGGGGTTCTCAACTGGCACATATTATGGGTTCTGTACTAGTGTCTTGTTGTATTAATAATCATCTTTATCACCAATATATCTATAACAGTACAACAATGACAATAAAACATCTACAAAACCTATTTTCACTCGGTTAAATTTATACAACTGACGGTAATTAAGTTGTGACTAACTTTTTTTTTCCTCTAGGATCTAGCTTATTAGCTGCTTACAGGGACACAGAATTTTGAGAACCCATAGAGAATTACTAGCTATGATTCAAAATACCCTTAACTAGACTAACATGTTTGGCAGACAATAGTGAAATCAATGTAATTAAGGACATTATTACGAGGTTAACAAAAGTAACTAGTGGAATCTAATCATTTTGTTTACCTTTCGTTGGAGCTCACTGATTTCTTGCATGAATTGCTGGTCCTGCATAAGCATATATTGATTAGTTGTCTGAAAAACTTGATATTGTGCCTGCCAATTCATACGAAGCTGAAAAGGGAACACCATCGGATGACACCCAACCTTTGTACAGAGCACCCGCTGCAGTCCTGCCTCGAGGTTCTTTTCCATCTGCTGCAGCTCTTCCACACTCAATCCCTCAAGCTCCTCACCTCTCATCTGTCTATAAATGTGGAATTGTGACATTATCAACTTATAATACGGGCTATTTCTGTTGCAAACAATTTTGTGATATATCGAAATAATAAAATCAATATGGATCAGAACATAATTAACCTAAGTTGAAGACTTGCTTCTGCCAGTTGTTCATTCAAACTGCTACACTTGCTGTGCTCTAACTGAAGAAGAAGGTGAATATATGCATAACTGTTAGTATATGTACGAAGCAATATAATTAAGAAGAAGGCTAGTTACAAAGACAATTTCTATGAGATTCTTGCATTTATATTCCTAGGTTAGAGGACATATAAATGTGTGGAGTTAGTACTTTATGTCACTTTTCTTTGCAGATCCAGGATATTAAATAGTGTCTCACATTTACATTAATTACATGGTCTTATTTTCATTAAGAGCAGGTACAATAGCAGACTATTAGCCAGCTGTAAACATATTTTAATGAGATAAAAGATGAGAGAGAATAGCAGCGGGCTACAGATCTATAGCCACCTGCAGCGCAGACTCCAAGACGTAATGTGTGCATGACAGGTGGGACCATATATTAATAGTATAGTAAGCAATTGTTATATGAATTGGCTATTAGATTGATTATATATGAATTGGAGATAGTAGCGGGCTATACTATTAAACTTGCTCTAAGCTTGCATCATCATATGAAGCGCGCACTTCTACAAGTTTGTGGACATCGTTGTTGTGCTCTAAACTCATGAAAAATTTAATGGTGCAGAGATCATGCTTTTGAGTTAATATGGGGAACCTATAAAATACTCAAAAATGAAACTAGCACATACATATATATTATGTAAAAAAAACAACATGCTACTGATCCAATCGTTTATAAGTTGGTACAACTAAGGCTGCAATCCGTTACAACTGTAGATCGAGTAATAACCTAGCATGATTTTTTTTCTTAATCTAACCATTTTCTTTAAAAAAAATCTCTGTTTGGGAAGACAAAAAATAAGTGAGAAGATTTCTGCACCCTCCACTACTGTCCTAGTTAATTAATTTAAGAATATTTTCATTACATGAGTGGGTAAAGTTATACCTTTACATGTGTAACTAATTTCTTAATTAAGCATAAGCAACTAGCTATAAGAGCAGGTACAGTAGCAGGCTATTAGCCAGCTGTAAACATATTTTAATGAGATAAAAGATGAGAGAGAAGAGCAGCAGGCTACAGATTTGTAGCCAGCTGCAGCACAGACTCCAAGACGCAATGTGTGTATGATAGGTGAGACCACATATTAGTAGTATAGTAAGCAACTATTGTATGAATTGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGCGGGCTATACTATTAAATTTGCTCTAAAGAACTAAACATAGTCAGCAGAACTGTTTGCAGAAAAAAAAAGTGTTGTTATCATTGCATGTTGACTTATGCATGTATATATTATATGAAACATTACACCACATATGATCTAATACTAGTTAGTACAAATCCACTTATGATTATGAACTACAAAACACAGAGATTGCTTTACATACATTCAGATCAATAGAAGGCTGCTTATCTGTTTTCCCCAGGTTCTTTGAATGTGTAGTATACTTGTCAATGATCTCGTTCATACTGCTTGACCAAAGAAAAATACCAATAATCAGTATTTGCACCAAGCTGCCTATACATGCGGTATCTATAAAATACATGTCTTCAAGCAAGGTTTTGTAAATTGACTTCAAAGGGGTTTGAACTCTGAAGATATAATAATAATGTATATCTAATATACAAAACCATCTATAGTCTAACACCTTCAAGTACAGCCTCTTTAATAAGAGAATAAATCTTAATTATTTGTTACTAGTTACGCTGAAAATTGGTAAGAGATTCTGCGAGCATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCAATTATCATATCATATCATATCATGTTCATATATATCAATGGAAAATTAAACTCTATATATGATTGTCTAAAGCACTCTGAATTTAATCTAATATAATGCATTTTTGTTTGTTTCTTCTGTTATTGTCTATAGGAATCCCATATTCAAAAGAGGGTAACATGAAGGAAACCAGTCAGACACCACTCAAGTACATATTGTTTATTGTTGTCAGATGAATTCTGGCCCATTGGTCTAAACTACAATGCATATTTTTCTCAGGAAAAAAACATAAGCATATATAAAGAATATACTACGTACGTATTGCTTAATGGTTGGAACCTAATTCTAGAAGTAAACTTCAATTTGAAACCCTGGGAATTGGGATTGTTGTGTAATCATAATATAAACTGCGTTGGACTAACACTTGCACAATATTTTATATCCTTTCAAAGGGGTGGAAAAAGATAGCTTTGGATGTTCTCCAAGAAGATGTAGCCAGCCAGCCAAGGATATGCTGAGCTTGTGTAGAATTCATACATTTCTGCTAGAGTTATGTACTACTCGTAATACGCATGCCCATGTTTAAACTACATTTTGATGTCTTCATCATATATGCTCTTAGTAATAATGTCAGCAGAATCACTGATCTTAAATTATAACAGTGTGCATAGTTTCTTATCTGACTTAAGGTTGTCCAGTGATTTCTGTTCAACGTTTTGTAGAAAAAAATTAAGTTATATAATATAACTCCCACCGTTCTCAACTAGGATACAGTTTAGCAGCACGCACTTGAACTTACAAAAACTATGGCACTAATCTAGTAATATGTGCACAAAAGTGTAAAGTTCAGTCATGTAAGAAAATTAGAAATGCCACCAGTAGGTTTTGATGATATGAATTGTCCCTCTTGTACAATAATTCCTACTGAAATACATACTGAATATATAGGTGCCATAAAAAAAACTATGCCTAGGTCTTTACGTTCTCAATCAGTGCAATTGGGCATGGAGATCGAAAAGACCAGTTTAATTACCAGGTCTTCGTTAACATTTGCCCTTCTGAAAATTAACTTCACCTCAATAAATGCTATGTTACTCCTATTTAATTGTTGACTGATAATTGTTCACTCAAATAGTATCATAGCGGAATGATCTTTTCCTCGTACATAATGGAGTTGTACGTTGATGGAGAAATAACGAGATGACAAATTGTAGGGAAGAAAAACTAGAGAGCATGATATTGGGCATATAATAGATAAACAATTATACTTAGCGGCTTGGGACATAAGATTGTGAAAGATAATGGTCTTAGCGTCTTAGGTGTATTGTAGAACTGTGTAGATGTTCCAAATGATAAGTAGAAAAAAGTATATAAAATGAGGACCCTAAAAAAAGAATAGTGGAGGAATAGTGTAAAGTTTATGAGGTACTACGACCTTGATCTTCTCACCTTCATTGTTAGTTACACAAAACACATAAATGACACGAGATTATTCTATTATAAAGTTCATGGCATGGTTCTAATTATAAGAACGAAACAAGTTATCATGAACTATATATCAAGTTGTAAATTACAAGCATCAAATATTAAGTTACACCCAAGGACAGTACGTTCCAAAAGAAGAACGCACAGTTCCATCATTTTTGGGAAAGAAGCACCCATATGCAGTCAACTATATAGGCACATAAAAAAATCACACAGAAATTAAACAAAGGGGCTTCAGAAAACGTGCATACAATTATGTTCTCTGATGCATGCGCTCAATCCCTAAATGATGCAATTATATTCTTAAATAGCTTCGACTGCCAAAAAGAAACTGATCAAGATCGATCACACTCTTAAAATGGAGTACCGTACTACTCATCACTATATTAATTAATTAACCCCCTTCTCTTTGGGCATGCTTACGTATAGTCCTACTATACTAAATTAACCCTTTTTTTTTTCTTGGACGACATACTTATATATGGAACATGCAAAGGCCACGTACCCTCTTGGTACTTGAAATGTTTATTTTTCTCTCTTGGAGAACACCAATAATGGTAAGCTAGCAAGCCCAAATACCCAAAGGCTACAAGAGTGATCCCATATATAGCTATAGCTACAGCAAAGTACCAGCCGGCCACCTGCACAGACCACGAGAGAGAGAGAGGCAGTAGGAGAGGATGAACTGATCGGCAGCTGGTTCGTTGGTTGGTTGGTTGACGACTCATGCATACGGCATGCCATGCCACACCACACATAAAATCACAGGTACGGCGGCGCCGCGATTAGCGGAGGCGCACACGGCCGCGCGCCGCGCCGATCGGCAGAGATCGATCGGTTTTGGGATTTATTTTTTATCGAGCAGCGTACGTAAGCAAAATTAACCGGATTTTAGAGTGTTCCTCTCCACATGAAAGCAAATGGAATACACGAGAAATATGCATATCTCTCATCTGCAAAAAGCAAGCGATCGAAATTTCCCCGTACTTAGCTGTGGAGATTGTGATTGAAACTACAGTAGAAAAATTCCCCATTTTCGGAGGACCATCCCGGGTGGTAGAATCCACCGGAATCGACCCAGGAATCAGCCCCAAAAACCGCAAGGATGATTGTTCTGGAAGTAGAAAAGAAGGCTCGATCCCGAAGTGGCGTTTCGCGAGAAGCATCGCATCAACCAAACACAAACCCTAAAACCGAAGAAGTAAAACTGTAGAAGAGGGAGGAAGCCCTAGCGACCGGGAGGATCTGGAGCCCTTTCAAACGAGAGAGGAACACAGCAGCAGGTAGCTAGATCTAAACCCCCCAAAAAAATCTCGAGCGGATCGAAAACTAAAAAAAGGGTGAGATCATCGGGTGAGCAGTAGCAGCATCAACAGTAGAGAGAGAGGGGGGATCAGAGAACGCGCTTACTTGGAGCTGGCGAACTGGGAGAGCTTGCCGGTGGAGGAGAAGACGACGAGCGCGACGTCGGCGTCGCACAGCACCGCCAGCTCCTCCGCCTTCTTGAACAGCCCCCGCCGCCGCTTCGAGAACGTCACCTGCCGCGCCGCCGCGCTCTCTATCCTCCGTATCTCCCTCCTCTCCCTCGCCATCTCCCTCCCCCCTCCCCTCCGATCAACCACCACCCCCTCCTCCTCCTCCGCGACAGAAAACTCCGACGAAATCCAAGCAGATTCACCCGCAACAACAACAGCACAGAGAGACAAGGAGAGAGAGAAACGCGCGCCGCAGCGGCGGGGTGCGCCTAGTATATAGCCGCGGCTCGCCAATGGCGAGGCGAGGCGAGGCGAGGAAAGAGAAAGAAAGGGATGTGGCCGCGCGCGGCTCCTCCGATT

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CDS seq

ATGGCGAGGGAGAGGAGGGAGATACGGAGGATAGAGAGCGCGGCGGCGCGGCAGGTGACGTTCTCGAAGCGGCGGCGGGGGCTGTTCAAGAAGGCGGAGGAGCTGGCGGTGCTGTGCGACGCCGACGTCGCGCTCGTCGTCTTCTCCTCCACCGGCAAGCTCTCCCAGTTCGCCAGCTCCAATATGAACGAGATCATTGACAAGTATACTACACATTCAAAGAACCTGGGGAAAACAGATAAGCAGCCTTCTATTGATCTGAATTTAGAGCACAGCAAGTGTAGCAGTTTGAATGAACAACTGGCAGAAGCAAGTCTTCAACTTAGACAGATGAGAGGTGAGGAGCTTGAGGGATTGAGTGTGGAAGAGCTGCAGCAGATGGAAAAGAACCTCGAGGCAGGACTGCAGCGGGTGCTCTGTACAAAGGACCAGCAATTCATGCAAGAAATCAGTGAGCTCCAACGAAAGGGCATTCAGCTGGCAGAAGAGAATATGCGCCTCAGAGACCAAATGCCTCAGGTGCCTACTGCTGGCTTGGCGGTTCCTGATACTGAAAATGTTCTTACTGAAGATGGACAATCATCTGAATCTGTGATGACTGCATTAAATTCGGGAAGCTCGCAGGATAATGATGATGGTTCTGATATATCCCTGAAACTAGGGTTGCCTTGA

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Protein seq

MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSGSSQDNDDGSDISLKLGLP

Function MADS-box transcription factor 55 [UniProtKB/Swiss-Prot:Q69TG5]

Transcripts

sorry
Gene Transcript Chromosome Start End Strand Source
OsAzu_06g0008050 OsAzu_06g0008050.02 Chr06 6166725 6177482 - NAM
CDS seq

ATGGCGAGGGAGAGGAGGGAGATACGGAGGATAGAGAGCGCGGCGGCGCGGCAGGTGACGTTCTCGAAGCGGCGGCGGGGGCTGTTCAAGAAGGCGGAGGAGCTGGCGGTGCTGTGCGACGCCGACGTCGCGCTCGTCGTCTTCTCCTCCACCGGCAAGCTCTCCCAGTTCGCCAGCTCCAATATGAACGAGATCATTGACAAGTATACTACACATTCAAAGAACCTGGGGAAAACAGATAAGCAGCCTTCTATTGATCTGAATATGAGAGGTGAGGAGCTTGAGGGATTGAGTGTGGAAGAGCTGCAGCAGATGGAAAAGAACCTCGAGGCAGGACTGCAGCGGGTGCTCTGTACAAAGGACCAGCAATTCATGCAAGAAATCAGTGAGCTCCAACGAAAGGGCATTCAGCTGGCAGAAGAGAATATGCGCCTCAGAGACCAAATGCCTCAGGTGCCTACTGCTGGCTTGGCGGTTCCTGATACTGAAAATGTTCTTACTGAAGATGGACAATCATCTGAATCTGTGATGACTGCATTAAATTCGGGAAGCTCGCAGGATAATGATGATGGTTCTGATATATCCCTGAAACTAGGGTTGCCTTGA

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Protein seq

MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSGSSQDNDDGSDISLKLGLP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_06g0008050 OsAzu_06g0008050.01 Chr06 6166725 6177597 - NAM
CDS seq

ATGGCGAGGGAGAGGAGGGAGATACGGAGGATAGAGAGCGCGGCGGCGCGGCAGGTGACGTTCTCGAAGCGGCGGCGGGGGCTGTTCAAGAAGGCGGAGGAGCTGGCGGTGCTGTGCGACGCCGACGTCGCGCTCGTCGTCTTCTCCTCCACCGGCAAGCTCTCCCAGTTCGCCAGCTCCAATATGAACGAGATCATTGACAAGTATACTACACATTCAAAGAACCTGGGGAAAACAGATAAGCAGCCTTCTATTGATCTGAATTTAGAGCACAGCAAGTGTAGCAGTTTGAATGAACAACTGGCAGAAGCAAGTCTTCAACTTAGACAGATGAGAGGTGAGGAGCTTGAGGGATTGAGTGTGGAAGAGCTGCAGCAGATGGAAAAGAACCTCGAGGCAGGACTGCAGCGGGTGCTCTGTACAAAGGACCAGCAATTCATGCAAGAAATCAGTGAGCTCCAACGAAAGGGCATTCAGCTGGCAGAAGAGAATATGCGCCTCAGAGACCAAATGCCTCAGGTGCCTACTGCTGGCTTGGCGGTTCCTGATACTGAAAATGTTCTTACTGAAGATGGACAATCATCTGAATCTGTGATGACTGCATTAAATTCGGGAAGCTCGCAGGATAATGATGATGGTTCTGATATATCCCTGAAACTAGGGTTGCCTTGA

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Protein seq

MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSGSSQDNDDGSDISLKLGLP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_06g0008050 OsAzu_06g0008050.03 Chr06 6166725 6177484 - IsoSeq
CDS seq

GTTTCTCTCTCTCCTTGTCTCTCTGTGCTGTTGTTGTTGCGGGTGAATCTGCTTGGATTTCGTCGGAGTTTTCTGTCGCGGAGGAGGAGGAGGGGGTGGTGGTTGATCGGAGGGGAGGGGGGAGGGAGATGGCGAGGGAGAGGAGGGAGATACGGA

Protein seq

VSLSPCLSVLLLLRVNLLGFRRSFLSRRRRRGWWLIGGEGGGRWRGRGGRYG

OsAzu_06g0008050.03OsAzu_06g0008050.02OsAzu_06g0008050.01AS6166625 bp6168000 bp6170000 bp6172000 bp6174000 bp6176000 bp6178000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr06 6172308 6173868 - OsAzu_06g0008050.02 OsAzu_06g0008050.03,OsAzu_06g0008050.02 All

Expression

Leaf Root Panicle
FPKM 0.726337 46.017609 1.444158

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0217300 RBH 1.735087 2.299129 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g11330 RBH 0.388603 0.459099 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0217300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0034530 RBH 1.772763 31.945364 0.343079
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0007900 RBH 0.105559 3.798221 0.485569
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0007910 RBH 2.108772 39.608578 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0008030 RBH 0.0 0.951396 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0007910 RBH 2.567871 14.319452 3.623377
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0099700 RBH 0.78972 1.631578 1.4769855
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0007640 RBH 0.195862 0.922146 0.101269
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0099700 RBH 0.949544 1.206478 2.153837
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0008090 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0007920 RBH 0.0 7.438876 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0007980 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0008050 RBH 0.0 0.000000 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0007830 RBH 0.170354 9.173059 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G007750 RBH 1.330399 1.752288 1.547611
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0008020 RBH 4.297329 9.830177 1.923259
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Huazhong Agricultural University

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