Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0140200 | OGI:06005800 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:2106719-2111720 | ||||||||
| Gene Symbol | RLP1, OsRLP1 | ||||||||||
| DNA seq | AGTGATGCATGCATCTTGTATACAACAAGGAACTACATTGGTTGTATCTGAACCAGAACCCAGCTGTCCAGAATTACCAGATGTCCAGATGTCCAGAATTACCTAAACTTGGATCTCCTATCTGAACCAGCAGTCTACAGACCTACTCCCTCCGTCAAAGACAAACCCTGGAATTGCGTGTCTAACTTTGACTGTCCGTCTTATATGAAACTTTTTTATAATTCGTATTTTTATTGTTGTTAGATGATAAAACATGATTAATACTTTGTGCGTAACTTGTCTTTTTAATTTTTTTCATAATTTGTTTAAATAAGACGGACGGTCAAACATTGGGTACGGAAACCAGGGTTTATCTTTTTTTGGGACGGAGGGAGTACCATACAAGTTATACAAGAACATAAACTAGTTACCTTCCGTAGTATATCCAAATTCCAATTCGTAGCAGGTGATTGAGTTCTGGCTGCCAAGACGATAAATTTCCATGGATTGGCGTCTTCCTGCTTTGATCCTGTTGAGTTTTATCTGAACTATAGCACGGAACTCATCCAATGTCTTGTCAGTGAACTGGAAGTAGGCATTTCTTGCAGTTCTGCTGAATATGAGGATGGCAGAAACGACAGATAATCCATATGCAAACCCTAGCAGAGTGCATAAGTATGTCCCCCTGTCAATCATATTCTGATGTTTTCTAGTAGTAGTATGTTGCGAGCATATTCTTGATAGCGAGGCACCACAATTTCCACAAAGATCTGCATTGCCTAGATATGGTTCATCTGTGAAAGTTGAAAACTGAGAGCTACATGGTATCACTCCTGACAGATCATTGTAGGACAAATTCAGAACCGATAGATTAATCAAATCTGTGATGCTCGGAGGAATTGATCCTGACAAATCATTCGACGAGAGATCAAGTGCCTCTAAATGACTGAGGTTCCCAATTTCGTCAGGAATACTCCCAAGTATGTGATTTCCTGATAGATTCAAGGCAAGCAAAAAAGATATTGCTCCTATTTCTCTGGGGATTTCTCCTGTAAATTGATTTCTTGATAGATCAATAAAGTTTAGCGGGTAATCGTACGTTGAGCTGTAACTCTCAAGTTTATCAGTGTATACGTGTATGGCCAAATATGTACGTCCATCAGTATAAACTGTAGCAAATTTGGCGGAAGGAATCATGACAGCATATCCATGATCAACGCACATGGATGTTAAATTTCCTAGAAATTGTGGTACAGGACCAGATAATTTGTTAGAAGCAAGATCTAAATTTTGCAGGGCATGAAGTTGGGGCAGTGACTCAGGTATTTCACCAGAAAATTGATTTGAGCGTAAAGATAGAGTAATCAGAGAGCCCAGACTATCACCCAGCCATGATGGTAAGCTTCCTGATAAACTATTAGATCCGAGATCGAGAATGATCAATCCATTACATGACTGCAATGAGGAGGGTAATGTGCCAGATAAACTGTTCTCTCTAAGAGATAATATTGCAAGGGAGGTTATGAAACCCATGGTTGAAGGTATTTCTCCATGAAGATTATTATTCGAAAAGTCAATGGTATGCAGTCTTGAGGAATTCTTCCAACAATCTGGTAGAACACCTGAAAATAAGTTGTTTGAGAGGTCAACTAATTCCATCGAATCCATCTCGCAAAGATATGCTGGGATAGTTCCATTCAGTTGATTATCTGAGAGCTTGATGTAATAAGCGTACTTGGCTCCTAAGCTTTGTGGTAAGGATCCAGACAAGAAGTTTTTGGATAGATCCAGCACTTTAACACTAGCTGGTAAACCAGGAATGCCTCCTTCAAGTACATTTGATCTCATATTGAAAGTACTCAACATTTTCATATGCACCAAGCTTGTTGGCAAGTGGCCAGTGATGCTGTTACTTGAGATATCCAAGGTAGTGATTGATGAAGAGAAGTTCCAGAGCCAATCAGGTAATGTACCTGTGATTTTTGTGCTTCCTAGATCAATCATCTTAATTTTGGTTTGTGATCGCAGCCAGGCAGGGATGTGGGGTCCTACATGGCAACCATGTAGTCCTAGACCTGTGAGTTGAAAAGTTGGCATCCAGTTGGGTTCAATTACTATTTTCAGTTTATTTGATGCTAAACTCAGGAAATCCAACCTAGATAGATTGCCAAGATGGACTTCAGACAGTCTACCCCCAAATGCATTGTATGAAAGATCCAGGTAAATCAATTGTGATAACTTGCCAATATCTTCTGGTATTTGTCCAGTGAAAGAGTTCTTGCTGAGATCAAGAGTAGTTAAACCTGTCAAGTGCTCAAGCCAACCAGATAGATTTCCAGTTAGATTATTGAAGCCAACTTTGAGAACTTGCAGCTCCTTCATGCAGGAAAACAGATTCTTTTCTGCTGTAATATTCCCTGATAAATTATTTCTAGACATGTCGATGATATTCAGGCTGCACAATCTACTCATGTGTTGCGGTATCTCTCCTTCCAGGTGGTTATCCAGCAACTGAAGAAAACTCAGGGAGGACAAGTTCCCTATGTTATCAGGAACCGATCCAGAAAGCTGACAACTAGACAAGTCCAAGTAAGAAAGAGAATGCAGGCTCCAGATCCACCTTGGTAAAGTAGAATTCAGCTCATTGTTACTAAGATCAAGCACTGTGAGGGCCGTGAAATTGACATAAGAAACTGAATTCAAACTGGTGGCAGGGAGAAATGCATCATTCAAGCGAAGCACTTGAAGCAAAGGGAGACTACTGATTGCCTGCAACCAATCTGAACATGCAACAAGATACAACCTGCCGAGGTCCAAGTACCTGAGGGCACGGAGGCGAGAAACCCAATGGAAATTATCCATTCTGATCGTAGAGGAGTTCAAAGCAAGGTGGCTGAGCATTGACAGATTGCCAAGTTGAGGAGGAACCAACCCGGCAAAACCAGCATGGGAGAGATCAAGATGCCTCAACTTGCTGAAGGAGCCTATGAAGTCTGGGATGGCCACACCACCGAAGTCGTTTCCACTCAGGTTAAGGTACCGTAGATGAGTCAAAGCAGCCAAAGATGAGTTGATTTCACCTGTGAAGCTAAGAGCATACTGGCCGATGTCAAGGCCGATGACATGGCCAGTCCTCTTGTTGCAGGACACGCTACCCCATGAGCAGCAGTCGTGGCCTTGCCAGGAAGGCAGCTCACCAGCGGAGTCAGCACAAAGGCCTGCTTTGAAGGCAAGCAGAGCATCCCTCTCGCTGGTGATGCACACAGCAGCAGCGGCTTCCTTCCCTGCGTTTGCGATAGAGTGGCAAAGGAGGGAGATTAATGCTGCAAGCCACACCCCTTGCATCCTTCCTCTCATCACGGACATCCAGTAGAGCCTGTGACTAGCACTGTCAAGTTAGCTTCTGATTAGTTATCACAGAAGTTGCTAGGGTATTGATTAGTCAAGTTTCCATGAAGGCCAGAGTAGATATAAGAAGAGAAGAGCCAAAGACGGGGTTAAAGTCATGTGTAATTCTCTTCCAGACCTTGAACCCCAACCTAAAGACTCAGGCAATCAAAGTCTACTCATGAAGTCAAGCTGTCCCTATATCCACGTCGTGCGTGGGCTCTGTCTTTTTCTGCAACTGGAAGAATGTCGTATCAAAGCAGCACCAAGTTTCTGTTTCCTCTTTTGACCATCCTGACATTTCCAGCACTGAGGAACTGACGCAGAAGGTTCCCAAGAACAGATCAACGTGCATAGTTCACAGAGTTATTTGGAAAGGAAAACAAATTAGAATTTCCAATTGTAGAGAAGCAGATAAAAGATTCAATGAGGTACTACATACCTCAATTTATTATTGGAGCCCCTTTTGTTATTTGCCTAACAATGCACATAATCATCCTTCATGTATCCTTTATTAACACATGACCTGCAAAGGGAAATGGGTGATTTCTACTATGCAACCTACAATGACATAAGTGTATAAGCAATACCCCCACATCTTGCATGCATGTTTTTTGCACTGTCTATACATTTATTTGTTCATTGTTCAAGATATTGGCCTATACAGTCTCATAAATGCATGCTGAAGAGTTCAAGGTAGATCGTCTCTTTATACGAAGTTACGAACGCTACTAGCCCACATAAGCACTAGAAGTTGAGGGTGCCAATGCCACTCAATATCGGCTAACCGCTATCTAAAGCATCAATCCGCTCCAAACAAACAGGGAAAAATTAAGAACACATACAACTATATATATGTAAGTGGCCGGCCAACTATGCCGCGCAATAAAAGGACGTCTTTCAATACAAATTGGTGAAATAGGAATAGCTCCCTTGTCACCAATTTATCATTACAATTATTTATTGCATGAACCCTCGCCGGAAAGAGGCACCTAAGTGGTGTGTGCAACTCGGGAGCATCAATGGAAACTGTTCAAACCATCTCTCCTGCTTGTTATGACATTTTTTTAGCATCACGATTCAGCACCAGGTTTACAGGCTTCTCTTGCTTTTGCCTAGGTCCAAAAATAATAATAAAAGGAGATTTGGAGGAAATACATCCCTCCAAACATATTTTTAAGAAGAAATTGTGAGCGGATTGAACACAAAATCTTAGGGTTAAAACCACACGCCCCTTGCCATTACATCATCAATATCAAAGTACATCTCGCTTTTGCCTCTCTACCGCAACACAGCGCGGAACAAACAGCACGCCCCGAACCGAATTGATTCGAAACCACCAACCACGCCGCAGTGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCAGCATCCGCGCAACAACAGAGGAGCCGTGCGCGGAATGGAGAGGTAAGGGAAGGGGGTGGGTCGGTCGGTAGGTCACTCACAGCTTGCTGGCCGCGGCGTCGTCGTCGTTGGTTGGCCTGCACGGCGGCGGGGGCTGCTCCGCGCGGCGGCGGGAGCGGCGGCGGGCACCACCTCCCGCCGCCGCCACCTCCATTCCGGCCGGGTGCACGGTGCGGGTGGATCGATCGATCGCTC
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| CDS seq | ATGTCCGTGATGAGAGGAAGGATGCAAGGGGTGTGGCTTGCAGCATTAATCTCCCTCCTTTGCCACTCTATCGCAAACGCAGGGAAGGAAGCCGCTGCTGCTGTGTGCATCACCAGCGAGAGGGATGCTCTGCTTGCCTTCAAAGCAGGCCTTTGTGCTGACTCCGCTGGTGAGCTGCCTTCCTGGCAAGGCCACGACTGCTGCTCATGGGGTAGCGTGTCCTGCAACAAGAGGACTGGCCATGTCATCGGCCTTGACATCGGCCAGTATGCTCTTAGCTTCACAGGTGAAATCAACTCATCTTTGGCTGCTTTGACTCATCTACGGTACCTTAACCTGAGTGGAAACGACTTCGGTGGTGTGGCCATCCCAGACTTCATAGGCTCCTTCAGCAAGTTGAGGCATCTTGATCTCTCCCATGCTGGTTTTGCCGGGTTGGTTCCTCCTCAACTTGGCAATCTGTCAATGCTCAGCCACCTTGCTTTGAACTCCTCTACGATCAGAATGGATAATTTCCATTGGGTTTCTCGCCTCCGTGCCCTCAGGTACTTGGACCTCGGCAGGTTGTATCTTGTTGCATGTTCAGATTGGTTGCAGGCAATCAGTAGTCTCCCTTTGCTTCAAGTGCTTCGCTTGAATGATGCATTTCTCCCTGCCACCAGTTTGAATTCAGTTTCTTATGTCAATTTCACGGCCCTCACAGTGCTTGATCTTAGTAACAATGAGCTGAATTCTACTTTACCAAGGTGGATCTGGAGCCTGCATTCTCTTTCTTACTTGGACTTGTCTAGTTGTCAGCTTTCTGGATCGGTTCCTGATAACATAGGGAACTTGTCCTCCCTGAGTTTTCTTCAGTTGCTGGATAACCACCTGGAAGGAGAGATACCGCAACACATGAGTAGATTGTGCAGCCTGAATATCATCGACATGTCTAGAAATAATTTATCAGGGAATATTACAGCAGAAAAGAATCTGTTTTCCTGCATGAAGGAGCTGCAAGTTCTCAAAGTTGGCTTCAATAATCTAACTGGAAATCTATCTGGTTGGCTTGAGCACTTGACAGGTTTAACTACTCTTGATCTCAGCAAGAACTCTTTCACTGGACAAATACCAGAAGATATTGGCAAGTTATCACAATTGATTTACCTGGATCTTTCATACAATGCATTTGGGGGTAGACTGTCTGAAGTCCATCTTGGCAATCTATCTAGGTTGGATTTCCTGAGTTTAGCATCAAATAAACTGAAAATAGTAATTGAACCCAACTGGATGCCAACTTTTCAACTCACAGGTCTAGGACTACATGGTTGCCATGTAGGACCCCACATCCCTGCCTGGCTGCGATCACAAACCAAAATTAAGATGATTGATCTAGGAAGCACAAAAATCACAGGTACATTACCTGATTGGCTCTGGAACTTCTCTTCATCAATCACTACCTTGGATATCTCAAGTAACAGCATCACTGGCCACTTGCCAACAAGCTTGGTGCATATGAAAATGTTGAGTACTTTCAATATGAGATCAAATGTACTTGAAGGAGGCATTCCTGGTTTACCAGCTAGTGTTAAAGTGCTGGATCTATCCAAAAACTTCTTGTCTGGATCCTTACCACAAAGCTTAGGAGCCAAGTACGCTTATTACATCAAGCTCTCAGATAATCAACTGAATGGAACTATCCCAGCATATCTTTGCGAGATGGATTCGATGGAATTAGTTGACCTCTCAAACAACTTATTTTCAGGTGTTCTACCAGATTGTTGGAAGAATTCCTCAAGACTGCATACCATTGACTTTTCGAATAATAATCTTCATGGAGAAATACCTTCAACCATGGGTTTCATAACCTCCCTTGCAATATTATCTCTTAGAGAGAACAGTTTATCTGGCACATTACCCTCCTCATTGCAGTCATGTAATGGATTGATCATTCTCGATCTCGGATCTAATAGTTTATCAGGAAGCTTACCATCATGGCTGGGTGATAGTCTGGGCTCTCTGATTACTCTATCTTTACGCTCAAATCAATTTTCTGGTGAAATACCTGAGTCACTGCCCCAACTTCATGCCCTGCAAAATTTAGATCTTGCTTCTAACAAATTATCTGGTCCTGTACCACAATTTCTAGGAAATTTAACATCCATGTGCGTTGATCATGGATATGCTGTCATGATTCCTTCCGCCAAATTTGCTACAGTTTATACTGATGGACGTACATATTTGGCCATACACGTATACACTGATAAACTTGAGAGTTACAGCTCAACGTACGATTACCCGCTAAACTTTATTGATCTATCAAGAAATCAATTTACAGGAGAAATCCCCAGAGAAATAGGAGCAATATCTTTTTTGCTTGCCTTGAATCTATCAGGAAATCACATACTTGGGAGTATTCCTGACGAAATTGGGAACCTCAGTCATTTAGAGGCACTTGATCTCTCGTCGAATGATTTGTCAGGATCAATTCCTCCGAGCATCACAGATTTGATTAATCTATCGGTTCTGAATTTGTCCTACAATGATCTGTCAGGAGTGATACCATGTAGCTCTCAGTTTTCAACTTTCACAGATGAACCATATCTAGGCAATGCAGATCTTTGTGGAAATTGTGGTGCCTCGCTATCAAGAATATGCTCGCAACATACTACTACTAGAAAACATCAGAATATGATTGACAGGGGGACATACTTATGCACTCTGCTAGGGTTTGCATATGGATTATCTGTCGTTTCTGCCATCCTCATATTCAGCAGAACTGCAAGAAATGCCTACTTCCAGTTCACTGACAAGACATTGGATGAGTTCCGTGCTATAGTTCAGATAAAACTCAACAGGATCAAAGCAGGAAGACGCCAATCCATGGAAATTTATCGTCTTGGCAGCCAGAACTCAATCACCTGCTACGAATTGGAATTTGGATATACTACGGAAGGTAACTAG
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| Protein seq | MSVMRGRMQGVWLAALISLLCHSIANAGKEAAAAVCITSERDALLAFKAGLCADSAGELPSWQGHDCCSWGSVSCNKRTGHVIGLDIGQYALSFTGEINSSLAALTHLRYLNLSGNDFGGVAIPDFIGSFSKLRHLDLSHAGFAGLVPPQLGNLSMLSHLALNSSTIRMDNFHWVSRLRALRYLDLGRLYLVACSDWLQAISSLPLLQVLRLNDAFLPATSLNSVSYVNFTALTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNLSSLSFLQLLDNHLEGEIPQHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKLKIVIEPNWMPTFQLTGLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGTLPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVKVLDLSKNFLSGSLPQSLGAKYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLGDSLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQFLGNLTSMCVDHGYAVMIPSAKFATVYTDGRTYLAIHVYTDKLESYSSTYDYPLNFIDLSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSGVIPCSSQFSTFTDEPYLGNADLCGNCGASLSRICSQHTTTRKHQNMIDRGTYLCTLLGFAYGLSVVSAILIFSRTARNAYFQFTDKTLDEFRAIVQIKLNRIKAGRRQSMEIYRLGSQNSITCYELEFGYTTEGN |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0140200 | OsNip_06t0140200-01 | Chr06 | 2106719 | 2111720 | - | RAP2018-11-26 | ||
| CDS seq | ATGTCCGTGATGAGAGGAAGGATGCAAGGGGTGTGGCTTGCAGCATTAATCTCCCTCCTTTGCCACTCTATCGCAAACGCAGGGAAGGAAGCCGCTGCTGCTGTGTGCATCACCAGCGAGAGGGATGCTCTGCTTGCCTTCAAAGCAGGCCTTTGTGCTGACTCCGCTGGTGAGCTGCCTTCCTGGCAAGGCCACGACTGCTGCTCATGGGGTAGCGTGTCCTGCAACAAGAGGACTGGCCATGTCATCGGCCTTGACATCGGCCAGTATGCTCTTAGCTTCACAGGTGAAATCAACTCATCTTTGGCTGCTTTGACTCATCTACGGTACCTTAACCTGAGTGGAAACGACTTCGGTGGTGTGGCCATCCCAGACTTCATAGGCTCCTTCAGCAAGTTGAGGCATCTTGATCTCTCCCATGCTGGTTTTGCCGGGTTGGTTCCTCCTCAACTTGGCAATCTGTCAATGCTCAGCCACCTTGCTTTGAACTCCTCTACGATCAGAATGGATAATTTCCATTGGGTTTCTCGCCTCCGTGCCCTCAGGTACTTGGACCTCGGCAGGTTGTATCTTGTTGCATGTTCAGATTGGTTGCAGGCAATCAGTAGTCTCCCTTTGCTTCAAGTGCTTCGCTTGAATGATGCATTTCTCCCTGCCACCAGTTTGAATTCAGTTTCTTATGTCAATTTCACGGCCCTCACAGTGCTTGATCTTAGTAACAATGAGCTGAATTCTACTTTACCAAGGTGGATCTGGAGCCTGCATTCTCTTTCTTACTTGGACTTGTCTAGTTGTCAGCTTTCTGGATCGGTTCCTGATAACATAGGGAACTTGTCCTCCCTGAGTTTTCTTCAGTTGCTGGATAACCACCTGGAAGGAGAGATACCGCAACACATGAGTAGATTGTGCAGCCTGAATATCATCGACATGTCTAGAAATAATTTATCAGGGAATATTACAGCAGAAAAGAATCTGTTTTCCTGCATGAAGGAGCTGCAAGTTCTCAAAGTTGGCTTCAATAATCTAACTGGAAATCTATCTGGTTGGCTTGAGCACTTGACAGGTTTAACTACTCTTGATCTCAGCAAGAACTCTTTCACTGGACAAATACCAGAAGATATTGGCAAGTTATCACAATTGATTTACCTGGATCTTTCATACAATGCATTTGGGGGTAGACTGTCTGAAGTCCATCTTGGCAATCTATCTAGGTTGGATTTCCTGAGTTTAGCATCAAATAAACTGAAAATAGTAATTGAACCCAACTGGATGCCAACTTTTCAACTCACAGGTCTAGGACTACATGGTTGCCATGTAGGACCCCACATCCCTGCCTGGCTGCGATCACAAACCAAAATTAAGATGATTGATCTAGGAAGCACAAAAATCACAGGTACATTACCTGATTGGCTCTGGAACTTCTCTTCATCAATCACTACCTTGGATATCTCAAGTAACAGCATCACTGGCCACTTGCCAACAAGCTTGGTGCATATGAAAATGTTGAGTACTTTCAATATGAGATCAAATGTACTTGAAGGAGGCATTCCTGGTTTACCAGCTAGTGTTAAAGTGCTGGATCTATCCAAAAACTTCTTGTCTGGATCCTTACCACAAAGCTTAGGAGCCAAGTACGCTTATTACATCAAGCTCTCAGATAATCAACTGAATGGAACTATCCCAGCATATCTTTGCGAGATGGATTCGATGGAATTAGTTGACCTCTCAAACAACTTATTTTCAGGTGTTCTACCAGATTGTTGGAAGAATTCCTCAAGACTGCATACCATTGACTTTTCGAATAATAATCTTCATGGAGAAATACCTTCAACCATGGGTTTCATAACCTCCCTTGCAATATTATCTCTTAGAGAGAACAGTTTATCTGGCACATTACCCTCCTCATTGCAGTCATGTAATGGATTGATCATTCTCGATCTCGGATCTAATAGTTTATCAGGAAGCTTACCATCATGGCTGGGTGATAGTCTGGGCTCTCTGATTACTCTATCTTTACGCTCAAATCAATTTTCTGGTGAAATACCTGAGTCACTGCCCCAACTTCATGCCCTGCAAAATTTAGATCTTGCTTCTAACAAATTATCTGGTCCTGTACCACAATTTCTAGGAAATTTAACATCCATGTGCGTTGATCATGGATATGCTGTCATGATTCCTTCCGCCAAATTTGCTACAGTTTATACTGATGGACGTACATATTTGGCCATACACGTATACACTGATAAACTTGAGAGTTACAGCTCAACGTACGATTACCCGCTAAACTTTATTGATCTATCAAGAAATCAATTTACAGGAGAAATCCCCAGAGAAATAGGAGCAATATCTTTTTTGCTTGCCTTGAATCTATCAGGAAATCACATACTTGGGAGTATTCCTGACGAAATTGGGAACCTCAGTCATTTAGAGGCACTTGATCTCTCGTCGAATGATTTGTCAGGATCAATTCCTCCGAGCATCACAGATTTGATTAATCTATCGGTTCTGAATTTGTCCTACAATGATCTGTCAGGAGTGATACCATGTAGCTCTCAGTTTTCAACTTTCACAGATGAACCATATCTAGGCAATGCAGATCTTTGTGGAAATTGTGGTGCCTCGCTATCAAGAATATGCTCGCAACATACTACTACTAGAAAACATCAGAATATGATTGACAGGGGGACATACTTATGCACTCTGCTAGGGTTTGCATATGGATTATCTGTCGTTTCTGCCATCCTCATATTCAGCAGAACTGCAAGAAATGCCTACTTCCAGTTCACTGACAAGACATTGGATGAGTTCCGTGCTATAGTTCAGATAAAACTCAACAGGATCAAAGCAGGAAGACGCCAATCCATGGAAATTTATCGTCTTGGCAGCCAGAACTCAATCACCTGCTACGAATTGGAATTTGGATATACTACGGAAGGTAACTAG
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| Protein seq | MSVMRGRMQGVWLAALISLLCHSIANAGKEAAAAVCITSERDALLAFKAGLCADSAGELPSWQGHDCCSWGSVSCNKRTGHVIGLDIGQYALSFTGEINSSLAALTHLRYLNLSGNDFGGVAIPDFIGSFSKLRHLDLSHAGFAGLVPPQLGNLSMLSHLALNSSTIRMDNFHWVSRLRALRYLDLGRLYLVACSDWLQAISSLPLLQVLRLNDAFLPATSLNSVSYVNFTALTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNLSSLSFLQLLDNHLEGEIPQHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKLKIVIEPNWMPTFQLTGLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGTLPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVKVLDLSKNFLSGSLPQSLGAKYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLGDSLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQFLGNLTSMCVDHGYAVMIPSAKFATVYTDGRTYLAIHVYTDKLESYSSTYDYPLNFIDLSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSGVIPCSSQFSTFTDEPYLGNADLCGNCGASLSRICSQHTTTRKHQNMIDRGTYLCTLLGFAYGLSVVSAILIFSRTARNAYFQFTDKTLDEFRAIVQIKLNRIKAGRRQSMEIYRLGSQNSITCYELEFGYTTEGN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.580184 | 0.255420 | 2.033834 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0140300 | RBH | 0.0 | 0.0 | 0.552516 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g04830 | RBH | 0.392351 | 0.171791 | 0.523548 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0140200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0002930 | RBH | 0.503383 | 15.472146 | 1.712196 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0002860 | RBH | 0.061756 | 0.579736 | 3.727174 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0002800 | RBH | 0.790917 | 10.483084 | 13.607391 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011100 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0002780 | RBH | 7.565340 | 10.675179 | 18.267668 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0033700 | RBH | 0.802195 | 3.5296575 | 5.3935725 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010780 | SBH | 0.0 | 0.000000 | 0.232642 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0151000 | SBH | 3.943083 | 6.1207495 | 0.224874 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0011190 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011040 | SBH | 2.607627 | 24.942671 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011070 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0011220 | SBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0010980 | SBH | 0.445477 | 9.713138 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G010880 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011190 | SBH | 0.000000 | 5.689448 | 1.144959 |
