Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsNip_04g0464400 | OGI:04070730 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr04:23178407-23182899 | ||||||||
Gene Symbol | NRT1.3B, OsNRT1.3B | ||||||||||
DNA seq | AACTTGTAAGTCGCTGTAGTCTTTGTAGAAGAGAGGTAACATTGACCTACATTATGCGCCAGAGGGCAGAGCGAGTACAATTCAGAGTCTATAATTGCAAGACTTCGGTAATTTCAGCATTACACGTTGCTGAATAATTTTGAGGATGCTCCAAGGAGAAAGAAAAGAAAACATTAGAGAGTCAAAACACAAATTAACCCGGCATAAGCTCTCCAGCCATCCAGGTACACAGCAGTAGCATACTTCGAGTTCGAGCTAGAAGTCCATCCCTTTCACTGTCGTCGCGGCCTCCCTGACCGCGCCCTCGTCGTCCGGCGGCGAGTCCGCCGCGGGCAGTATCGCCGGCCTGTACTGGTGCCGGCTCGCGAACACCAGGAACGCCGCGAAGTTGGCCACCCCGAGCGCGGCGAGCATCCAGTAGAACAGGTCCAGCCTCCCGTCGTCCAGGCCGTCCCGGATCCACGCGCCCCGCGTGGCGGCGTCGACGGCGGACACGAGGAGGCTGCTCAGGAAGAACCCCATGGCGAGCGTGGCGAGGAACAGGCCCGTGCTCATGGACTTCATCCGCTCGGGGGCCTCCCTGATGAAGAACTCCAGCTGCCCCACGTACGCGAACGCCTCGCCGGCGCCCACCAGGAAGAACTGCGGCACCAGCCAGAACGCGCTGATCATCGCGACGCCTCCTCCGCCGGCTCCGCCGGACGCGTCGCGGCGCTTCTTCTCGACGAGCGCCGAGACGGCCATGGCGAGCGTGGCGAGGACGAGCCCCGCGCCGACGCGCTGCAGGGAGGTCAGCCCCTGCGGGCGGCGTGTGATCATCAGGCGGCGCGCGAGCGGGACGAGGAGCCGCTCGCTGGCGGAGGTGAAGAGGAGGATGGACAGGAAGAGGAAGACGGAGAAGGAGCCCGCCGGCACGGCGAAGCCGCCGGCGCGGCGGTCCATGTGCGACGCCTGCTCGACGGAGAAGGTGGTCATCTGGGAGTAGACCGTCCAGAAGAGGATGCTCGTGGACCAGATGGGGAGCAGCTTCACCACCATCTTCGCCTCCTCCACCTCCGTCACCGTCAGCGCCGCCACTGGCTGCTCCGGTGGCGTCGCCGCCGCCAGGTCGGCCTCCACGATTGCGGCTTTGTCCAGACACCTACGCTCAGACGAAAATACAAAGAAACAGAGAATGCTAAAGATCTCGGGGCCATTCAAAATAAATTATTCGCCGGATTATTATTGTTACGGATTATCTGTTTTATTATAAAAGTTAAATATATTTTTCAAATATAATATAAATGCAGGTGCTCAAAACGTGCATATACTCACCCTTATAAACACACGCACGTATACCTTATGCTTGGAGTACATTTAAAAGATTAGGCAAACAATTGATGAAGTCACTGCCGATTGTCTCGATTATTTTAAAATAAACTTAGAAAATAATGACTTACATGCAAGTGTTCCTAGCAATGCAATAGATTTTGTTTTCGAAAAGATATTTTAAGACATATGGAGCAAATAATCCACATTAATAATACTATGATAAAATAGAAAGGGCAGATCACGATCCACCAGCCATATTACAACACGTGCTAAGATGCAAACTTTGTTATCACTATATGTGATATGTCAAGTTTGATTCATGCATGATGGACAACTTTGGATTCATAGTATGCTAACGCTGGTCGTTCGCAACGCAGTTTGATGAAGTTTACTACAATTTGCAAGGCATGGACGGTTCTGCTTTGAGCTCTCTCTACCATTCCTCGTCAGTTTTCAGTGTTCTGCAAAAAAAAATTGTAGTGCTCCCCAAAATGTTCAGAAGCATTTGCTACAAAATCTTTAGTGACGGGTCGTTTGCATGGAGGTGATGATTTGCAGATTTAGCATGCCGGTTTAGATCCTTCGGCTCCCAACTATGAGTGTTTAGTGTGGCAAGCAACACTTAATACTGCATGAGATTTGTTTTCTCAATAACAGGGCAAACATATAACCTTGGATTTCATTATAGATCAATTATATGAGCTTATTTTGTGGGCATCTAAAATCAGTTACTACCAAACAGTAGCTTCCTAGTAGTAATACGTACGCAAACAACACAACCTAATGCAGAGCGCTGTAGCTCCCTCTGCATTAGGTTGTGTTGTTTGCTGTTGGATCTACATCCAACCGTCTAAAACAAATTCCTACAGTAGATCCAAACAGTAAATAGGAACAGAGTAAAAAGGTTACTGTTCACAGAGTACTTGCTACAGTAATAGAACAATGTTTGCAGCATTGATTCACTGTAGCAGACACAGAATACTGTAGCTACAGTCCTCTGCTATACTGTAGAGGACCTGTATCCGGTGTGGTGGCCTTGCTAGGATTAATTGGCTTTGGATTACACGTACAACTGCCAATTTATCAATCTCTGCTTACTTAAGCAATGATCTACCGATATATAGGAGCATATGCGAAATCCTAGCATCGGATCAGATAGGGTTCTCTTCCGTGTATTTTTGGTATCAAACTCTGTCGGTTTCATTCGTTTCCTTTTCCTAATTATCATGGTTCTACGTGCTGTACAGGCAAGAAATCTACCAAAATTTGTCGTCTCCAGTTTCTCTTGTTCGTTTCAAGCGTTTCAGATGTCATAGTCACTCGCAACACAGAAAACACTTCTACTAATATACGCCTTTACTGAATAGCTGCTTGTATCGAACTCTTTATCTACTTTTCTTTTTTGAAGCCAACTCTTCGTCTACGTTTCATCCGCTGGAATCATATAAATCATGACTATACTGTATCACCTAAAAAAGTAAAAAATGTGCATGTCTATCAGTCTATGTCAAAATAGCAAGTTTTTTTCAGACGAACACTTCAAATATTTAATTTCGAAAATCGGAGAATTTTATAGCGTGGTTTGAATTTTGGTCATTCTGTTATATATCTAGCATATGAGTATATGACACATTGACATGACACGGTACAGAGCTTGACAACTAGTAACTTAGGGTTGTTTAGATTGTAGCCAAAATAAATCTTACCAAATTAATTTTGGTAATACCAAAATTTTAACAAGTTGGTAATATTACTAATTTTTTCAGGATTTATGATGTATTTACCAAATTTTAACAACAAACTAAATGTAGATATTTTTTATAACTTTGCAAAAAAGAAAAGATATGATTGAAAATGATATCAATGTGAACAGTTAAGTGTGTTGACCTGAGCCTGTTAGTGTGTGGCACCTTAGCCTTGTGGAAGCCGTGGAGCTCGCCGGCGTCCGCCGGGAACGGCATCCTCCGTTTGCGCCACGCCGCCCACAGCACGCGGCCGATCGCCGTGAGGGGGCTCCCCTGGGGCCTCCGGTACCGGTACCTCGGCGTGCCGGCGGCGAACACCGCCACCGCGGCGACCATGGCGGCGGCCGACGCGCCGTAGCCCCAGCCGCGGCCGACGTCCTCCTGCACGTACACCAGCGCGGTGACCGCGAGCACCGAGCCGAGGCTGATGCAGAAGTAGAAGCGGTTGAAGAAGAAGAGCATGGCCTTCCCCTCCCGGCGGTCGCGCCCGTCGAACTGGTCCGACCCGAACCCGGACACGTTCGCCTTCAGCCCCCCCGCCCCCGCCGCCGCCGTGTACAGCGCCGCGTACAGCATCGCCATCTGCCCGCCGCTCGCCGCCACGCACCCACCACTCTCCGCCGCCGCCGCCGCCGCCACCGCGTCGCCGCACGGCGGCGGCCGCATTCCCGGCACTACCGTGCTCGCTGCCAGCAGGCTCACACCCTGCGCGTGTAGACGTCAGACAAGGGAGATCATGCTGTGTTGTGTGCTGCGCAGCTGCGGTACGTACGATGGCGGCGATGGTGGCGGAGACGGCGACGGTGAGGTAGCGGCCGAGCACGGCGTCGGCGAGGAAGCCGCCGAGGAGGGCGAGGAGGTTGAGCGTGCCCAGGAAGTTGGTGACGATGTTGGCCGACCTGGCGTTGGAGAGGTGCAGGTCGCCGACGAGGTACGTCACCAGGTTCATCGAGATGCCCACCACGCACACGCGCTCCGCCAATTCCGTCCCTTATCACGACAAAAAAAAAAAAAACTCGATCATCACAACCATGAACAAAAAACCGTCGTCGCAGTCGCACGCTCTCGCAAAAAAAAAAAAAACAAAAACTAACAGAAAAAAAAAAGTACACCCAACAGGCCGGCGTGACCAAGCACAAGTGCACAACGTACACACACACATGCCATACCTAGGATGAGACCGGCTCCGAGCCATCCTCCGGTCCGGTCCTTGTCCACCGGGTTTCCCCTGAAATCCACCACCACGCCGTCGTCGCCGCCATGAACGCCGGCAGAAACCTACAGCGTGTACACGCATACAGTTAAAGAAAGATCCAATAAGCATCGACTTACTCTACTAAGCGTATTACATCACGCATCAGCGTCTTAATCGAGTTCCCTACTACGACGCACCATGTTGCGCACGGGAGGGCGAGGAGCAGCAACTTTGCGAGGTTG
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CDS seq | GTTTCTGCCGGCGTTCATGGCGGCGACGACGGCGTGGTGGTGGATTTCAGGGGAAACCCGGTGGACAAGGACCGGACCGGAGGATGGCTCGGAGCCGGTCTCATCCTAGGGACGGAATTGGCGGAGCGCGTGTGCGTGGTGGGCATCTCGATGAACCTGGTGACGTACCTCGTCGGCGACCTGCACCTCTCCAACGCCAGGTCGGCCAACATCGTCACCAACTTCCTGGGCACGCTCAACCTCCTCGCCCTCCTCGGCGGCTTCCTCGCCGACGCCGTGCTCGGCCGCTACCTCACCGTCGCCGTCTCCGCCACCATCGCCGCCATCGGTGTGAGCCTGCTGGCAGCGAGCACGGTAGTGCCGGGAATGCGGCCGCCGCCGTGCGGCGACGCGGTGGCGGCGGCGGCGGCGGCGGAGAGTGGTGGGTGCGTGGCGGCGAGCGGCGGGCAGATGGCGATGCTGTACGCGGCGCTGTACACGGCGGCGGCGGGGGCGGGGGGGCTGAAGGCGAACGTGTCCGGGTTCGGGTCGGACCAGTTCGACGGGCGCGACCGCCGGGAGGGGAAGGCCATGCTCTTCTTCTTCAACCGCTTCTACTTCTGCATCAGCCTCGGCTCGGTGCTCGCGGTCACCGCGCTGGTGTACGTGCAGGAGGACGTCGGCCGCGGCTGGGGCTACGGCGCGTCGGCCGCCGCCATGGTCGCCGCGGTGGCGGTGTTCGCCGCCGGCACGCCGAGGTACCGGTACCGGAGGCCCCAGGGGAGCCCCCTCACGGCGATCGGCCGCGTGCTGTGGGCGGCGTGGCGCAAACGGAGGATGCCGTTCCCGGCGGACGCCGGCGAGCTCCACGGCTTCCACAAGGCTAAGGTGCCACACACTAACAGGCTCAGGTCAACACACTTAACTGTTCACATTGATATCATTTTCAATCATATCTTTTCTTTTTTGCAAAGCCGACCTGGCGGCGGCGACGCCACCGGAGCAGCCAGTGGCGGCGCTGACGGTGACGGAGGTGGAGGAGGCGAAGATGGTGGTGAAGCTGCTCCCCATCTGGTCCACGAGCATCCTCTTCTGGACGGTCTACTCCCAGATGACCACCTTCTCCGTCGAGCAGGCGTCGCACATGGACCGCCGCGCCGGCGGCTTCGCCGTGCCGGCGGGCTCCTTCTCCGTCTTCCTCTTCCTGTCCATCCTCCTCTTCACCTCCGCCAGCGAGCGGCTCCTCGTCCCGCTCGCGCGCCGCCTGATGATCACACGCCGCCCGCAGGGGCTGACCTCCCTGCAGCGCGTCGGCGCGGGGCTCGTCCTCGCCACGCTCGCCATGGCCGTCTCGGCGCTCGTCGAGAAGAAGCGCCGCGACGCGTCCGGCGGAGCCGGCGGAGGAGGCGTCGCGATGATCAGCGCGTTCTGGCTGGTGCCGCAGTTCTTCCTGGTGGGCGCCGGCGAGGCGTTCGCGTACGTGGGGCAGCTGGAGTTCTTCATCAGGGAGGCCCCCGAGCGGATGAAGTCCATGAGCACGGGCCTGTTCCTCGCCACGCTCGCCATGGGGTTCTTCCTGAGCAGCCTCCTCGTGTCCGCCGTCGACGCCGCCACGCGGGGCGCGTGGATCCGGGACGGCCTGGACGACGGGAGGCTGGACCTGTTCTACTGGATGCTCGCCGCGCTCGGGGTGGCCAACTTCGCGGCGTTCCTGGTGTTCGCGAGCCGGCACCAGTACAGGCCGGCGATACTGCCCGCGGCGGACTCGCCGCCGGACGACGAGGGCGCGGTCAGGGAGGCCGCGACGACAGTGAAAGGGATGGACTTCTAGCTCGAACTCGAAGTATGCTACTGCTGTGTACCTGGATGGCTGGAGAGCTTATGCCGGGTTAA
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Protein seq | VSAGVHGGDDGVVVDFRGNPVDKDRTGGWLGAGLILGTELAERVCVVGISMNLVTYLVGDLHLSNARSANIVTNFLGTLNLLALLGGFLADAVLGRYLTVAVSATIAAIGVSLLAASTVVPGMRPPPCGDAVAAAAAAESGGCVAASGGQMAMLYAALYTAAAGAGGLKANVSGFGSDQFDGRDRREGKAMLFFFNRFYFCISLGSVLAVTALVYVQEDVGRGWGYGASAAAMVAAVAVFAAGTPRYRYRRPQGSPLTAIGRVLWAAWRKRRMPFPADAGELHGFHKAKVPHTNRLRSTHLTVHIDIIFNHIFSFLQSRPGGGDATGAASGGADGDGGGGGEDGGEAAPHLVHEHPLLDGLLPDDHLLRRAGVAHGPPRRRLRRAGGLLLRLPLPVHPPLHLRQRAAPRPARAPPDDHTPPAGADLPAARRRGARPRHARHGRLGARREEAPRRVRRSRRRRRRDDQRVLAGAAVLPGGRRRGVRVRGAAGVLHQGGPRADEVHEHGPVPRHARHGVLPEQPPRVRRRRRHAGRVDPGRPGRREAGPVLLDARRARGGQLRGVPGVREPAPVQAGDTARGGLAAGRRGRGQGGRDDSERDGLLARTRSMLLLCTWMAGELMPG |
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Function | Protein NRT1/ PTR FAMILY 6.4 [UniProtKB/Swiss-Prot:Q9LVE0] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNip_04g0464400 | OsNip_04t0464400-00 | Chr04 | 23178600 | 23182740 | - | RAP2018-11-26 | ||
CDS seq | GTTTCTGCCGGCGTTCATGGCGGCGACGACGGCGTGGTGGTGGATTTCAGGGGAAACCCGGTGGACAAGGACCGGACCGGAGGATGGCTCGGAGCCGGTCTCATCCTAGGGACGGAATTGGCGGAGCGCGTGTGCGTGGTGGGCATCTCGATGAACCTGGTGACGTACCTCGTCGGCGACCTGCACCTCTCCAACGCCAGGTCGGCCAACATCGTCACCAACTTCCTGGGCACGCTCAACCTCCTCGCCCTCCTCGGCGGCTTCCTCGCCGACGCCGTGCTCGGCCGCTACCTCACCGTCGCCGTCTCCGCCACCATCGCCGCCATCGGTGTGAGCCTGCTGGCAGCGAGCACGGTAGTGCCGGGAATGCGGCCGCCGCCGTGCGGCGACGCGGTGGCGGCGGCGGCGGCGGCGGAGAGTGGTGGGTGCGTGGCGGCGAGCGGCGGGCAGATGGCGATGCTGTACGCGGCGCTGTACACGGCGGCGGCGGGGGCGGGGGGGCTGAAGGCGAACGTGTCCGGGTTCGGGTCGGACCAGTTCGACGGGCGCGACCGCCGGGAGGGGAAGGCCATGCTCTTCTTCTTCAACCGCTTCTACTTCTGCATCAGCCTCGGCTCGGTGCTCGCGGTCACCGCGCTGGTGTACGTGCAGGAGGACGTCGGCCGCGGCTGGGGCTACGGCGCGTCGGCCGCCGCCATGGTCGCCGCGGTGGCGGTGTTCGCCGCCGGCACGCCGAGGTACCGGTACCGGAGGCCCCAGGGGAGCCCCCTCACGGCGATCGGCCGCGTGCTGTGGGCGGCGTGGCGCAAACGGAGGATGCCGTTCCCGGCGGACGCCGGCGAGCTCCACGGCTTCCACAAGGCTAAGGTGCCACACACTAACAGGCTCAGGTCAACACACTTAACTGTTCACATTGATATCATTTTCAATCATATCTTTTCTTTTTTGCAAAGCCGACCTGGCGGCGGCGACGCCACCGGAGCAGCCAGTGGCGGCGCTGACGGTGACGGAGGTGGAGGAGGCGAAGATGGTGGTGAAGCTGCTCCCCATCTGGTCCACGAGCATCCTCTTCTGGACGGTCTACTCCCAGATGACCACCTTCTCCGTCGAGCAGGCGTCGCACATGGACCGCCGCGCCGGCGGCTTCGCCGTGCCGGCGGGCTCCTTCTCCGTCTTCCTCTTCCTGTCCATCCTCCTCTTCACCTCCGCCAGCGAGCGGCTCCTCGTCCCGCTCGCGCGCCGCCTGATGATCACACGCCGCCCGCAGGGGCTGACCTCCCTGCAGCGCGTCGGCGCGGGGCTCGTCCTCGCCACGCTCGCCATGGCCGTCTCGGCGCTCGTCGAGAAGAAGCGCCGCGACGCGTCCGGCGGAGCCGGCGGAGGAGGCGTCGCGATGATCAGCGCGTTCTGGCTGGTGCCGCAGTTCTTCCTGGTGGGCGCCGGCGAGGCGTTCGCGTACGTGGGGCAGCTGGAGTTCTTCATCAGGGAGGCCCCCGAGCGGATGAAGTCCATGAGCACGGGCCTGTTCCTCGCCACGCTCGCCATGGGGTTCTTCCTGAGCAGCCTCCTCGTGTCCGCCGTCGACGCCGCCACGCGGGGCGCGTGGATCCGGGACGGCCTGGACGACGGGAGGCTGGACCTGTTCTACTGGATGCTCGCCGCGCTCGGGGTGGCCAACTTCGCGGCGTTCCTGGTGTTCGCGAGCCGGCACCAGTACAGGCCGGCGATACTGCCCGCGGCGGACTCGCCGCCGGACGACGAGGGCGCGGTCAGGGAGGCCGCGACGACAGTGAAAGGGATGGACTTCTAGCTCGAACTCGAAGTATGCTACTGCTGTGTACCTGGATGGCTGGAGAGCTTATGCCGGGTTAA
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Protein seq | VSAGVHGGDDGVVVDFRGNPVDKDRTGGWLGAGLILGTELAERVCVVGISMNLVTYLVGDLHLSNARSANIVTNFLGTLNLLALLGGFLADAVLGRYLTVAVSATIAAIGVSLLAASTVVPGMRPPPCGDAVAAAAAAESGGCVAASGGQMAMLYAALYTAAAGAGGLKANVSGFGSDQFDGRDRREGKAMLFFFNRFYFCISLGSVLAVTALVYVQEDVGRGWGYGASAAAMVAAVAVFAAGTPRYRYRRPQGSPLTAIGRVLWAAWRKRRMPFPADAGELHGFHKAKVPHTNRLRSTHLTVHIDIIFNHIFSFLQSRPGGGDATGAASGGADGDGGGGGEDGGEAAPHLVHEHPLLDGLLPDDHLLRRAGVAHGPPRRRLRRAGGLLLRLPLPVHPPLHLRQRAAPRPARAPPDDHTPPAGADLPAARRRGARPRHARHGRLGARREEAPRRVRRSRRRRRRDDQRVLAGAAVLPGGRRRGVRVRGAAGVLHQGGPRADEVHEHGPVPRHARHGVLPEQPPRVRRRRRHAGRVDPGRPGRREAGPVLLDARRARGGQLRGVPGVREPAPVQAGDTARGGLAAGRRGRGQGGRDDSERDGLLARTRSMLLLCTWMAGELMPG
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNip_04g0464400 | OsNip_04t0464400-01 | Chr04 | 23178407 | 23182899 | - | IsoSeq | ||
CDS seq | ACCTCGCAAAGTTGCTGCTCCTCGCCCTCCCGTGCGCAACATGGTTTCTGCCGGCGTTCATGGCGGCGACGACGGCGTGGTGGTGGATTTCAGGGGAAACCCGGTGGACAAGGACCGGACCGGAGGATGGCTCGGAGCCGGTCTCATCCTAGGGACGGAATTGGCGGAGCGCGTGTGCGTGGTGGGCATCTCGATGAACCTGGTGACGTACCTCGTCGGCGACCTGCACCTCTCCAACGCCAGGTCGGCCAACATCGTCACCAACTTCCTGGGCACGCTCAACCTCCTCGCCCTCCTCGGCGGCTTCCTCGCCGACGCCGTGCTCGGCCGCTACCTCACCGTCGCCGTCTCCGCCACCATCGCCGCCATCGGTGTGAGCCTGCTGGCAGCGAGCACGGTAGTGCCGGGAATGCGGCCGCCGCCGTGCGGCGACGCGGTGGCGGCGGCGGCGGCGGCGGAGAGTGGTGGGTGCGTGGCGGCGAGCGGCGGGCAGATGGCGATGCTGTACGCGGCGCTGTACACGGCGGCGGCGGGGGCGGGGGGGCTGAAGGCGAACGTGTCCGGGTTCGGGTCGGACCAGTTCGACGGGCGCGACCGCCGGGAGGGGAAGGCCATGCTCTTCTTCTTCAACCGCTTCTACTTCTGCATCAGCCTCGGCTCGGTGCTCGCGGTCACCGCGCTGGTGTACGTGCAGGAGGACGTCGGCCGCGGCTGGGGCTACGGCGCGTCGGCCGCCGCCATGGTCGCCGCGGTGGCGGTGTTCGCCGCCGGCACGCCGAGGTACCGGTACCGGAGGCCCCAGGGGAGCCCCCTCACGGCGATCGGCCGCGTGCTGTGGGCGGCGTGGCGCAAACGGAGGATGCCGTTCCCGGCGGACGCCGGCGAGCTCCACGGCTTCCACAA
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Protein seq | TSQSCCSSPSRAQHGFCRRSWRRRRRGGGFQGKPGGQGPDRRMARSRSHPRDGIGGARVRGGHLDEPGDVPRRRPAPLQRQVGQHRHQLPGHAQPPRPPRRLPRRRRARPLPHRRRLRHHRRHRCEPAGSEHGSAGNAAAAVRRRGGGGGGGGEWWVRGGERRADGDAVRGAVHGGGGGGGAEGERVRVRVGPVRRARPPGGEGHALLLQPLLLLHQPRLGARGHRAGVRAGGRRPRLGLRRVGRRHGRRGGGVRRRHAEVPVPEAPGEPPHGDRPRAVGGVAQTEDAVPGGRRRAPRLPQ
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.278870 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0580900 | RBH | 2.524133 | 3.092240 | 3.281504 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g39030 | RBH | 0.0 | 0.0 | 0.075194 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0464400 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0016220 | RBH | 0.0 | 0.0 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0016960 | RBH | 0.0 | 0.0 | 0.479761 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0016690 | RBH | 0.0 | 0.0 | 0.640865 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0016420 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0016640 | RBH | 0.0 | 0.0 | 0.570800 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0361800 | RBH | 0.071812 | 0.2895375 | 0.133947 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0015440 | RBH | 0.0 | 0.0 | 0.237810 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0360100 | RBH | 0 | 0.075306 | 3.2062285 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0016000 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0015890 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0015860 | RBH | 0.0 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0016380 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0016480 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G015670 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0015740 | RBH | 0.0 | 0.0 | 0.000000 |