Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_03g0793300 | OGI:03092530 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr03:32987044-32988118 | ||||||||
| Gene Symbol | SAP14, OsSAP14 | ||||||||||
| DNA seq | AGCTGTAAATAAAGACTTGTACTTTGCTTCTGCACATATCAATCGATCCAAATAGATACATCAACTGAATTAAACTGACTCTGTTACAGCGAACTACAACTAACTTTTCTTTGACGAAAATTACATCAAATTAATTGTGCGCTGAGCACAGAAAATCGATCATTGCAAACAAGGATTCAACTTCCCACAAGATTGAAGAACAGATCATTGATCTTTGATCGGCTACTTCGATTTGACCTCATGGATAGTGGTTGAGGATTCTTGATCAAATCCTGAAGGCCAGCTTGTCGGCGACGACGACCGGATTCTGCTTGGCGATCAGCTCCCTCCCGGAGCTCTTGTAGTCGAAGCCGCAGCCGTGCTCGTCGGCGTAGCGGTGGCCGCCGCAGAACGTGCCGCCGCACCGGCACTTGAACCCCGTCAGCCCCACCTTCCTCCGGCACGTCGCGCACCGGTTCGCCTCCGGCTGCTCCCCCGTCGCCGGCGACGAAGAAGAATACGACGCGTCCGCCGCGGCGGCGGCGGACGACGCGACAGCGACGCGCCACCTGGTTTTGTCGTCGGGCCTCGCGAAGGCGCAGAAGCCGCCGTACTCGCGCTTGGCCGTCGCCTTCCCCGCGGCGGCGGCGGATGCAGAAGAGGAGGGCGCGACGCCGGCGACGGTCAGCTTGGCCATCGCCTTCTCCGCGGCGGCGGATGCAGAAGAGGAGGAGGACGCGACGGCGACGCTCAGCCTGGTGTTGTTCTCGGGCCTCGCGAAGGCGAAGAAGCCTCCGTGCTCGCGCTTGGCCGTCGCCTCCCCCGCGGCAGCGGTGGTAGCAGAAGAGGAGGAGGAGGGCGCGACGGCGACGGCGACGGCGACGGTCAACTTGGCCTTCTTCTCCGGCGGCGGGGAGGCGAAGGAACCACCTGCTACCGGCTCGAGGTCGGCCACGCCGCCGTCGTCGCCATTGGCGGGGCACTTGCGCTTCGTCGCCATGCCTGCCGCGTGCGCGAGTCGTAGCAGCCGGCCACCCTCGATCCGATATCGCGAGACGGCGAGCGGGAACGGGAGCGGCGGCGAAGAAGAAAGCGC
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| CDS seq | ATGGCGACGAAGCGCAAGTGCCCCGCCAATGGCGACGACGGCGGCGTGGCCGACCTCGAGCCGGTAGCAGGTGGTTCCTTCGCCTCCCCGCCGCCGGAGAAGAAGGCCAAGTTGACCGTCGCCGTCGCCGTCGCCGTCGCGCCCTCCTCCTCCTCTTCTGCTACCACCGCTGCCGCGGGGGAGGCGACGGCCAAGCGCGAGCACGGAGGCTTCTTCGCCTTCGCGAGGCCCGAGAACAACACCAGGCTGAGCGTCGCCGTCGCGTCCTCCTCCTCTTCTGCATCCGCCGCCGCGGAGAAGGCGATGGCCAAGCTGACCGTCGCCGGCGTCGCGCCCTCCTCTTCTGCATCCGCCGCCGCCGCGGGGAAGGCGACGGCCAAGCGCGAGTACGGCGGCTTCTGCGCCTTCGCGAGGCCCGACGACAAAACCAGGTGGCGCGTCGCTGTCGCGTCGTCCGCCGCCGCCGCGGCGGACGCGTCGTATTCTTCTTCGTCGCCGGCGACGGGGGAGCAGCCGGAGGCGAACCGGTGCGCGACGTGCCGGAGGAAGGTGGGGCTGACGGGGTTCAAGTGCCGGTGCGGCGGCACGTTCTGCGGCGGCCACCGCTACGCCGACGAGCACGGCTGCGGCTTCGACTACAAGAGCTCCGGGAGGGAGCTGATCGCCAAGCAGAATCCGGTCGTCGTCGCCGACAAGCTGGCCTTCAGGATTTGA
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| Protein seq | MATKRKCPANGDDGGVADLEPVAGGSFASPPPEKKAKLTVAVAVAVAPSSSSSATTAAAGEATAKREHGGFFAFARPENNTRLSVAVASSSSSASAAAEKAMAKLTVAGVAPSSSASAAAAGKATAKREYGGFCAFARPDDKTRWRVAVASSAAAAADASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKLAFRI |
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| Function | Zinc finger AN1 domain-containing stress-associated protein 14 [UniProtKB/Swiss-Prot:Q852K8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_03g0793300 | OsNip_03t0793300-01 | Chr03 | 32987044 | 32988118 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGACGAAGCGCAAGTGCCCCGCCAATGGCGACGACGGCGGCGTGGCCGACCTCGAGCCGGTAGCAGGTGGTTCCTTCGCCTCCCCGCCGCCGGAGAAGAAGGCCAAGTTGACCGTCGCCGTCGCCGTCGCCGTCGCGCCCTCCTCCTCCTCTTCTGCTACCACCGCTGCCGCGGGGGAGGCGACGGCCAAGCGCGAGCACGGAGGCTTCTTCGCCTTCGCGAGGCCCGAGAACAACACCAGGCTGAGCGTCGCCGTCGCGTCCTCCTCCTCTTCTGCATCCGCCGCCGCGGAGAAGGCGATGGCCAAGCTGACCGTCGCCGGCGTCGCGCCCTCCTCTTCTGCATCCGCCGCCGCCGCGGGGAAGGCGACGGCCAAGCGCGAGTACGGCGGCTTCTGCGCCTTCGCGAGGCCCGACGACAAAACCAGGTGGCGCGTCGCTGTCGCGTCGTCCGCCGCCGCCGCGGCGGACGCGTCGTATTCTTCTTCGTCGCCGGCGACGGGGGAGCAGCCGGAGGCGAACCGGTGCGCGACGTGCCGGAGGAAGGTGGGGCTGACGGGGTTCAAGTGCCGGTGCGGCGGCACGTTCTGCGGCGGCCACCGCTACGCCGACGAGCACGGCTGCGGCTTCGACTACAAGAGCTCCGGGAGGGAGCTGATCGCCAAGCAGAATCCGGTCGTCGTCGCCGACAAGCTGGCCTTCAGGATTTGA
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| Protein seq | MATKRKCPANGDDGGVADLEPVAGGSFASPPPEKKAKLTVAVAVAVAPSSSSSATTAAAGEATAKREHGGFFAFARPENNTRLSVAVASSSSSASAAAEKAMAKLTVAGVAPSSSASAAAAGKATAKREYGGFCAFARPDDKTRWRVAVASSAAAAADASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKLAFRI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0168800 | SBH | 5.784594 | 7.793891 | 21.917175 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g57920 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0793300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0037840 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0037530 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0037580 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0037890 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0037410 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0563400 | RBH | 0.0126835 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0037210 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0565100 | RBH | 0 | 0 | 0.0541105 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0037750 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0037750 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0037360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0037420 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0037440 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G037220 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0037000 | RBH | 0.0 | 0.0 | 0.0 |
