Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0168800 | OGI:07011060 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:3675982-3678406 | ||||||||
| Gene Symbol | ZFP177, OsSAP9, SAP9, ZFP33 | ||||||||||
| DNA seq | GAAAATAGAGCATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGTGGATGAAAATTACATTTTTAGAATAGGAAATAAGTAAAACACCATATGCAAGAAAACAGGCTGCAAATGGGTGGGGGAACTAGGGATCGGTATCATGAAAAGGATCTGTACCATTTTCAGTTTCATTTAATTAGGTGATATAATCTGTTTTTTATTGTTTCAGCTCTCAAATTAATTTGCAAAAGATATAGCATGTATCAGCATTGCGCAGTAGGACAGCCAAATGTGTCACTGGATACATCCCAGGTTAACAAAATTCTAATAAATATTGTTCTAGCCAACCAAATTCAAGAGACCATCAAACCAGGGAATTGATAAAATTTCATAATTTCATACAGCTAAGGATTGTGTTCGCAAGCAGATGGAGATGGCAATGTTAGGTAGCCGATTTCAAACATTGAAAAACAGCAGGTTATATGATTCTCCCGAGAGGCTATGTCCTAGTATTATAGTAGTATCCCTCCAAAAGCTGAGCAATTCTTAAAACACTACAATGGGAAACACATAGAAACCAACGGTCTTCTCTGCTTTTGATTCCTGCAGAGCAAAATCAGCAGTGACGAAATACCTGAAACTCCGCGCTACAATCGTTCTGCTATATGAGCAGATCATTAGGCAGAACCAATGTTCTTCTACCTCATCGTTCGTCCATCTATATTGCTCACAGCCTCAGACAAATCATAGACTTTGCTGGATTGTTCACTCCACGATAACTTATGCAAACCGCGGAAGCAACCTACGTCCTCAATTCATCCCATCCGGATGTGCCTACAATCCAAGAAACCTCTCTCTAGCTTCCCGCAATCCCTAATATCCAAAAGGCGGCTGACCTTTTCTTCTTTTTTTTTTTTACAGGCTTATCAAGAAATCCCATGGCGCTATCCCCCCAGAATATAATCAATCGCTGATTTGCCATGCACGGCAAGAAAGGTTGATCCCTTTAATCCTTTATCAATCTCCGCGCAAAGGCAAAGCACACAGAAACCGTGTATCAATCGTTGGCGTAGCTTCCCTCACCTCTCATGGAGGTTCACACGATTGAGATAAGGCTGGGAGCAACATGCCACATCCAATTTTCCTCATAAGCGAGAGAATTCTATGTCTCCCACTCCTCCCTATGCTGATTGGCTCAAAAAGTAAAAAAAAAAAAATCATCTCCCCTACATGACTACATCTTAGAATCAAATCAAATCGCAGCAAATTTGGAAGCAATCAAATCACAGCAAAATCGATAACCATAAGGTCAACCTCCGAACACACAATCAAATCGCAAGCAAGCAACCCCTATCAACAACAACAACAACAATCACAGATCCAACCACACCCATCCCGATCTCCCAATAACCCCCTCCCCCCAAAAAAACCCCCAAAAAAATAAAAAAAATCAAGCCAACCACCCGACGAACCCGCGGTGGCGGATGGCTCAGATCGGCCACCGCCACCGCCACCGCCACCGCCGATCGGATCTGGGGGAAGAAGATGAACGAGGAGAGGGGCGCACCAACCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCGTTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGGACGACGAC
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| CDS seq | ATGGCACAAGAAAGCTGGAAAAATGAGTCTGAGGAGACTGTCCACACACCGGAGGCCCCAATATTGTGTGTAAACAACTGTGGCTTCTTCGGCAGTAGCATGACGAACAATATGTGTTCGAAGTGCTACAGGGACTTTGTGAAGGTCACGACAATGGCTGCCCCAGTAGTGGAGAAGAAGGCATTTACGCCAGCATCGTCTTCGAAGACACCATTGGAGCCAGCAAAGCCAGATGAAGTTCCTGCCGCAGCTGTAGAGGATAAGCAAGCGGCACAGGAGCCTCCAAAGCCACCCAGCAACCGATGCCTGTCATGCCGTAAGAAGGTTGGTCTGACTGGCTTCCAGTGCCGATGCGGAGGTACCTTCTGCTCAACACACCGTTATACCGAAGCTCACGACTGCACCTTCGACTACAAGAAGGCCGGCCGGGATCAGATTGCCAAGCAGAATCCTGTTGTGATAGCCGAGAAGATCAACAAGATCTGA
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| Protein seq | MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI |
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| Function | Zinc finger A20 and AN1 domain-containing stress-associated protein 9 [UniProtKB/Swiss-Prot:Q7Y1W9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0168800 | OsNip_07t0168800-01 | Chr07 | 3675982 | 3678406 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCACAAGAAAGCTGGAAAAATGAGTCTGAGGAGACTGTCCACACACCGGAGGCCCCAATATTGTGTGTAAACAACTGTGGCTTCTTCGGCAGTAGCATGACGAACAATATGTGTTCGAAGTGCTACAGGGACTTTGTGAAGGTCACGACAATGGCTGCCCCAGTAGTGGAGAAGAAGGCATTTACGCCAGCATCGTCTTCGAAGACACCATTGGAGCCAGCAAAGCCAGATGAAGTTCCTGCCGCAGCTGTAGAGGATAAGCAAGCGGCACAGGAGCCTCCAAAGCCACCCAGCAACCGATGCCTGTCATGCCGTAAGAAGGTTGGTCTGACTGGCTTCCAGTGCCGATGCGGAGGTACCTTCTGCTCAACACACCGTTATACCGAAGCTCACGACTGCACCTTCGACTACAAGAAGGCCGGCCGGGATCAGATTGCCAAGCAGAATCCTGTTGTGATAGCCGAGAAGATCAACAAGATCTGA
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| Protein seq | MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.784594 | 7.793891 | 21.917175 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0792900 | RBH | 3.493012 | 4.907670 | 18.840544 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g07350 | RBH | 3.946112 | 5.398742 | 5.550876 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0168800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0004340 | RBH | 0.416837 | 66.220520 | 20.372549 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0004300 | RBH | 1.028437 | 4.958213 | 13.589984 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0004190 | RBH | 4.593302 | 66.792900 | 24.102016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0004130 | RBH | 0.764083 | 1.948160 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0004230 | RBH | 22.647034 | 26.713507 | 56.730988 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0061200 | RBH | 0.0231795 | 0 | 3.4455255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0004740 | RBH | 1.012558 | 3.475733 | 6.632507 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0064600 | RBH | 0 | 42.0756625 | 18.1554745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0004220 | RBH | 1.120605 | 0.477844 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0004220 | RBH | 2.555389 | 27.153811 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0004250 | RBH | 7.549509 | 14.613426 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0004340 | RBH | 1.896842 | 3.000589 | 6.952336 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0004210 | RBH | 0.539731 | 22.931847 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G004370 | RBH | 1.316296 | 12.782755 | 14.942527 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0004160 | RBH | 6.475487 | 16.796776 | 28.124119 |
