Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsNip_03g0791700		OGI:03092330 \| 16/16			Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)			Chr03:32925900-32930224		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		TATACTGTAATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGGTAAGGTGCAGTTGATTAGATTTGTTGTTTGGTTCTTGTGAAATGGTAGTAGTGATGTGCATGAGTGTTCTTCAGTTAACATGATTGTTTTTTTTTGTCTTGTTACTGTCAGTTCAAGAATGGAGCAAGCTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTTTCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCTTGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCAGTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGTATGATTTGATTTGTCTCTCACTCATCACTGAATTTTATCTAAAATTTCACCAAATTTGATGTCAAAATTCACTAAGATTTGATTTCCTACTGGTGTCTGCGACAAAATCAAAACAGGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGGTATGCCAATCTTCTCCATTGATCAGTTCAGACTCTATTGAGCAAGAGAAATTTTATGGTCCCTAAGCAAGTTAAAGTTTAGATACTCAAGATACCTAGCACCTGAAGTTATCAAATTTACAATACAAAATGTGGTATCTCTCAGTACATTTTTAAGGATGGTAAAATTACCCATTGAGCAACCTACAACTAATTGATGCATGAAATTCACTGTATTCTGTTCAAATTAACCTCACGGGCTTATATGAGTGTGATGAATAAGTCCTGCATTTTGAAAAGCTTGGGAGCTGAGATCAGATCTTTGTTTGTTTGTCAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCGTATGTTAAATTGTCAGCTGTTCTCCTTCATTGTTTTTCTTTTCAGTTGTTTGCAGTATTCAGTCACTGACTGTTGCTTTGCACTGCATCCTGTACTGATTTTCACCAGAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGGTAGATCAGTCATTTTTAACAGTCCTTGGTAATTTGTTTTTCTGGCTGTTGCTGACTAGAAATGTTATGATGTTTGTCAATCCAAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGGTACTTATCAGGACTTGATCCGTACATATGCCTATGATCTGGTAGTTTCAATCAGTACAATCTAGTGAAAAAAAACCCACTGAATTCTGCATGTGTTATTTTGCAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGGTATGAGACATGACCATCACCTGAAAACCATTGTTTCACATGAAAAATGCCAACCTCTGAATTTCCACCTAGCAATGCACAGCACAATCTCTGAATCTTTACTCCTTTTTTCAGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTGTGCCATACATCCAAATCAATCAAGTATCCTCTGATCAAGTGACCATCACATTCACATTTCCAAACCAAGATTGATTTGTTAGATTTGTAGTGTTGATAGGTTATTGTTGGATTGGTGTGTATGGATGAAATGAGGAAGAGCTTTTGCCTTTGTTTTGAAGGATTCTAAAGTTCAGCTTGTTCTTACAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAACGGTCAGAGTTCCGTGATAATTATAAAAACAGCTGCGGTTGCTGCC More
CDS seq		ATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGA More
Protein seq		MRASPMAGASHHLVVFLAALLALLPGSSQLQYSQTWTLFKIQQMLNHPPVLSHWRRTTDFCGGGGTAAPSAAVVCYGDTVTQLHIAGVRGAPPLPMNFSIGALVMALSRLPDLKVLTLSGLGLWGPLPDKIGRLAALEIVNMSGNYLYGGVPGGLSQLTGLQTLILDDNLLAGELPAWIGELPQLAVLSLRNNSLGGAVPASVGRMESLRSLVLASNNLTGNLPDMSGLTNLQVIDVGDNWLGPAFPALGRKVVTVVLSRNRFTGGLPGEITSFYLLERLDVSWNRFVGPFMPALLSLPAIRYLNVAGNRFTGVLSDKVACGDNLQFVDLSSNLLTGSEPACLRPDKKPATVVLVNANCLEATGGDASQHPSPFCQNQALAVGITHGGKVRKKLTHHAGFLAGIAMAALAAASAIAVVAVVAVRRKNKKGVMVRPPAMLGEDNSSSTSGYPSKMFADARYISQTVKLGALGIPPYRTFSLVELEAATDNFENSLLLGQDSFGEMYRGRLGNGTLVAIRSLKVKRNQSSLSFSRHIETISRLRHRNLVSALGHCFEYDLDDSTVTQLYLVFEYVQNGNLRSRISQGTEGRKLTWAQRISAAIGIANGIQFLHAGMMPGLFGNNLKINNILLDQNHVAKISSYNIPILGEAMKSEKGGPGGKHHTESPLLNDKTDIFDFGVILLEIVSGKPITSLYEVEIMKELMLWAVADEDLVRRRSFADQEVSKGCSDESLRTIMQICLRCLAKEAVQRPSIEDVLWNLQFAAQVQDDWEGDNRSSDGSMVSSSSRITKSSRFQNEQTRSGREKECEDSSARGSVWLQAATEDGNFETGRRQAEDERY
Function		Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [UniProtKB/Swiss-Prot:Q8LFN2]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNip_03g0791700	OsNip_03t0791700-01	Chr03	32925900	32930172	+	RAP2018-11-26
CDS seq	ATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGA More
Protein seq	MRASPMAGASHHLVVFLAALLALLPGSSQLQYSQTWTLFKIQQMLNHPPVLSHWRRTTDFCGGGGTAAPSAAVVCYGDTVTQLHIAGVRGAPPLPMNFSIGALVMALSRLPDLKVLTLSGLGLWGPLPDKIGRLAALEIVNMSGNYLYGGVPGGLSQLTGLQTLILDDNLLAGELPAWIGELPQLAVLSLRNNSLGGAVPASVGRMESLRSLVLASNNLTGNLPDMSGLTNLQVIDVGDNWLGPAFPALGRKVVTVVLSRNRFTGGLPGEITSFYLLERLDVSWNRFVGPFMPALLSLPAIRYLNVAGNRFTGVLSDKVACGDNLQFVDLSSNLLTGSEPACLRPDKKPATVVLVNANCLEATGGDASQHPSPFCQNQALAVGITHGGKVRKKLTHHAGFLAGIAMAALAAASAIAVVAVVAVRRKNKKGVMVRPPAMLGEDNSSSTSGYPSKMFADARYISQTVKLGALGIPPYRTFSLVELEAATDNFENSLLLGQDSFGEMYRGRLGNGTLVAIRSLKVKRNQSSLSFSRHIETISRLRHRNLVSALGHCFEYDLDDSTVTQLYLVFEYVQNGNLRSRISQGTEGRKLTWAQRISAAIGIANGIQFLHAGMMPGLFGNNLKINNILLDQNHVAKISSYNIPILGEAMKSEKGGPGGKHHTESPLLNDKTDIFDFGVILLEIVSGKPITSLYEVEIMKELMLWAVADEDLVRRRSFADQEVSKGCSDESLRTIMQICLRCLAKEAVQRPSIEDVLWNLQFAAQVQDDWEGDNRSSDGSMVSSSSRITKSSRFQNEQTRSGREKECEDSSARGSVWLQAATEDGNFETGRRQAEDERY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNip_03g0791700	OsNip_03t0791700-02	Chr03	32927919	32930224	+	RAP2018-11-26
CDS seq	ACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGA More
Protein seq	TFSLVELEAATDNFENSLLLGQDSFGEMYRGRLGNGTLVAIRSLKVKRNQSSLSFSRHIETISRLRHRNLVSALGHCFEYDLDDSTVTQLYLVFEYVQNGNLRSRISQGTEGRKLTWAQRISAAIGIANGIQFLHAGMMPGLFGNNLKINNILLDQNHVAKISSYNIPILGEAMKSEKGGPGGKHHTESPLLNDKTDIFDFGVILLEIVSGKPITSLYEVEIMKELMLWAVADEDLVRRRSFADQEVSKGCSDESLRTIMQICLRCLAKEAVQRPSIEDVLWNLQFAAQVQDDWEGDNRSSDGSMVSSSSRITKSSRFQNEQTRSGREKECEDSSARGSVWLQAATEDGNFETGRRQAEDERY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNip_03g0791700	OsNip_03t0791700-03	Chr03	32929934	32930176	+	RAP2018-11-26
CDS seq	-
Protein seq	-

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.502353	0.000000	6.654647

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_07g0166700	RBH	0.410735	0.389662	6.694536
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os03g57780	RBH	0.000000	0.049698	1.051030
Nipponbare \| IRGSP 1.0 \| RAP-db	Os03g0791700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_03g0037750	RBH	0.0	0.774311	2.611851
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_03g0037440	RBH	0.0	0.317323	1.399635
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_03g0037500	RBH	0.000000	1.973561	3.357460
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_03g0037800	RBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_03g0037300	RBH	0.000000	0.000000	2.892043
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_03G0562200	RBH	18.3334185	77.837589	44.049643
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_03g0037100	RBH	0.000000	0.047371	0.341658
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_03G0564100	RBH	26.3713345	0.3210295	37.6478005
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_03g0037640	RBH	0.014846	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_03g0037650	RBH	0.053869	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_03g0037250	RBH	0.000000	1.864815	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_03g0037320	RBH	0.000000	0.000000	0.271954
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_03g0037330	RBH	0.0	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_03G037110	RBH	0.0	0.738019	2.571216
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_03g0036890	RBH	0.000000	0.000000	1.973839

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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