Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0801700 | OGI:02096010 | 1/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:34170247-34180842 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTTGGCAGATTTGCAGTGTTTCGGTTTTTTATTGTTTCGGGGGTCTAAATGATGTTTTCTGTGAAAGTGTATAACTAGGAATTGTAGAAAATTCATAGATCTATCTTCTGACCAAAGGGCGTGATTTTATCTTAAGTGGTTTAGTCTATATGAATTTTTGAGTATGGCTATTGTTTTTATGTCATAATCTGGACATTAGTAGATTGAACTGTTTTTGGAGGGGTTAAACAGTGGAATCAGTCAGGACACCTATAGACAAAGTTGTAGAGTTTTCTCTAAGCTTTCCATATTGGTAAAGTACACTTTGATCGGATGAGTAGAACTCCAGATATAGTTGTTTTTGTGTGTACCCTCTGAAATTCTGGACAGATTCTGAAACCTGTTTTCAAGCGCAAAATAGACCATTTAAATGGCAGAATAAAAATATGCTTTCTACATAAAAGTTGTAGGTATAGTTCTGTAGATTTCCAAAATGTATTTATTTGCAGTCATAGCCTATTTATATTTTGAGATATAAATGTTTGAATCAGCAGTGTTGTTTATAGTCCGAGCGGCGTTCCTTGTATTTGCATGTTAACGGGCTGGGGCCGTAGGGGCGTATTATTTATTTTTTTATATGCATGTTTGAGTGTATATTCTGAGGTTGTCTTGTGAATAGGTGGTGGTGCTTCGGATTATGCTTGGTATCGTCTCTTCGTTGTTAGAGGTAAGTAAACATAGCGGTGGTTTGCTACAGCTTTAACCTGTTATTTTATTCTACCTTCACTTTGAAATTATATATCATCAACTGAGACATTATTATTTGTTACACAGAGGATTTACCTATCTGAATCACACTTATTGATTTTACACTGTATATGGTTATACTTTACGCTCTTGATTATAATACCCTTATACTGATCTCCATCGAAGGAATGTGGTTCTGATGTTATACTCTGGAATTCATACTGCATTTGCATCACTTGCATTGCATTTGAAGTTATGTCGTGAACCTATGGTTGCGACCATACTGGTACAGCATCGTATATTGCCGTAATACGATGCAGCTTCACACCTTGTTGGGTGTGAAGGCAGGAGTACATATCATTGCATTGCATATGCACTTATTCATCCTGTTGGGTGTGAAAGCAGGAGTACATATCATTGCATTGCGTATGCACATATTGCAGGATGTTATGAGAATTATCGATCGAAGATATCTTTGAGAAGTGTTTTCTTCTCTGAGATTTGTGAGTATATGGATTTGATTGGTGACGTCACGATATTTTTCGTCCATGGATATTCAACTTGTCTTTACGTGAATCATAACTTAGTATTTAATTAACTATACAATCCACTTGTGGTTTAAATAGCTTGATAAAGCCGTTTAGGTTGGAAGTGTAACAAGAAACCATATTCTTACAATCCACCATCCAAATAAAAAGTGACTAGTAGATACAACGGAGGACATAGCTATTTATTTGAATTATTTAAAAGCATGCATGCATGCCATGAGAACCTCATCACTCTCTGGTCACAAGGAACACATCTCTAGCAACCAAAGATGACAAATATGCATATAATTAGCCTTATTGGTGGTCCATGAAGCTCTCCTAACCCCATATATATATATATATATATATATATATATATATATATACATATATATATATATATATATATACATATATATATATATATATATATGTATGTATGTATATATATATATATATGTATGTATGTATATACAAGTATATATATGTATATATATATATGTATATATATGTATATATATATACATATATATATATAGTATATAACATGAGCATATGGGTAAGGAAAGTCATCTCAAATCCACACCAGTTACCCTCAATATAAACGGTGCTAATGGCCCAGAACTAGACCATGGCTCTGCTCCAGTATGAGCACTGACATTTTGACCTTCATGATCACTGGAAGAAACCAGGTCTGTATGAGGGAAAAGAAATCAAACCGAGTCTTTCAGAAACAAAATATAGAAATTTAAACAAGATGGAATAAATTACATGTTTTGTTACACATATTTGCATCAACCCAAGCATTTTGACACCATCAAACCCAAGCATATGTGAAAATTCTGCTGCATAATCCAGTGCATTATCACCTGCTATAGTTTTCCAATCCTTGAAGATCCTTCAGAGAACCAGAAAATAGGATTATGGCTGTTGCAGTTAAAAGAATTTATAGGTTGCTATTGCAGTTAAAAGAAGTAACACGCTGAAAAATCCATAGAATAATTAATACAATTTTAGAGGCAATATAAATCCCAAGCATACTCTGATTTTGGCATTCCTTTGCCGTAAGCCTTTTGAACCTCACTCCCAACCTGAAAATAAGTGTTAAAATATAAATTCTCAATCAATTAACTGTGGAGGGCCTAGAAAGAATTACAAACAACAGAAAAATATTTTTTTTGTTAATTTATTTTGACATGCACCATCTCTGAATTAAATATACCTTCAAATAAGTGGCAACAGACCATGTTTTTATTTCAGATGAGTGATATGCTACAAACTAAGAAACAAGAAAAGAATAAGGGTAACTGCTACCTACTGCCATCACTCATGTGGTAAACTGTCATCGAATGAGTAGTTACAGGGAGAAAATCAATTGCTAGATGAGGGAGAGCATCAATTGCCTTATACACATGATCTGCATCAGTTTTTAGCAAACAAAACCTGCATCTGTAATTCTGTATCATAAGTCAATCGGACGAGAGCTAAGTAGACAAGTGGGTAAGTCCAAATCTGTAATGTAGAACTCCTCTGAAATACTGTACTTATCAAGTGGGTAAGTCCAAAGATTGACTACACAAGAAACTCAAGTCAACTTATCAAAGATGAATAGTTACAAAGTATATATCATTCTCAAAGGCAGGATTAAGAAAATTCAAGTTACTCTATCTATATTCATAGCCATAACCTGCAAATACTTTACTCCTTTGTCCATATAACAGCAGCTCCAAAGGCTGTTGTCTGGAAGAAGATGAGAAAAGAACTAAAGATGTGCCCCATACATATTATATACAATATCAGCATTGAAGTAAGAATCATATGCTACATGCTCTAGAACCTTAAGAAATTTCAATGTTGTCATATTAATCTTCCTCAGTTTGTATTTGTTTACTGATTTTTGTTCCTATATGCTACAGTGTTTGAACCAACTGCATGGTTTCTGTTTCAAAACGTGAAGGGCATATCTCCAGCTCCACATACCTATATTAGTAGTGCATTTGTAAATAATTGGCAATATTTCAGATTTGGACTTCCATAGTCACTGATTTCAGGTTATGGTGGTAGCCCTTTGGACTATGTTATTGCCAGGCAGTCTACATGTATCATCTGAAAATAAAAAGCTGATAAATCAGTAGAAATTTCATGAAGCATACATTTCATACCAATTGACAAACTCAGTCAGCAACTCAGCATGGCACAAGCCTGGAATCGGGATAAAAAATAAAGTTAAGACACGGAGAAAAAAAGTAAGATAAACATAGCAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTCCAAATTGAGCAGGAAGAGGATAATAAGCCATCAGTTTCTTTCTAAATGGTTCCTATGCTTACATTGACCTTGTTTTATCAGAATTTTTGAGTGGTACTGATGAGGCCATTGTCGTGTCTTTTCGCACGTCGCCGTCGTCAGATCATGGCTCGCCATCGATATCCCAGGCTTGCTCAGAGGACGCCATAGGGTTCTGGAAGCCCTTCCTCCACCAGTTCCAAAGGTATGCTCATCGAAAGCTCGCTCTTGACTGCGATTTGGTTACTGATTTTGATCTGTTGTGCATTGATGGGATGGAAGAGGAAGATGGGTCAGGGGATCTGGGGAGTCATGGGCTCGTTTTACGGCACATGAATAAGTATAGTATTGGGATACATATTCTTTTTACAACGTTGACTAAAAGAATAGCTATGGTGATTTGCTTAATTAATCACTTGTGAATGCCATTGTTGTATGTATCAATTATTTATTCACTTCTGAATTACGGAGTGTAATGATTTCTCATGGATTATCATGTATTTTGCAGACAGGAGGCTTTAGTGAGAACATGATTCCTACTGTATGATTCAATATGAGAAAGGCAACAAAAGTTAATGTCACAATAAAATTGTGGGATCTTGGAGACTCCGGAGCATATGTGGGAGAGATATTGTTGTGAAGTTTCTGCAATTGTGTAAGTTTTTTTTCCTGTCTACTTACTAATTTGGTGCATGTGCAGCAGGAATGGCACTATACTAAGTAGTTGTCATGCTTAGTGGTTGTTGGTTACACATGCCAACCAATTGTTTTCATGTCATTTTGATTTGACCTCTGCTGAAATTTGGGAAGATTTTGTAAATGTAATTACTTTAAAGTTTCAATTTTGACCCCAAAGCAGTGGAGGCACTTAATTTACATTTCAGCTTGTTAGAAATAACATTTCACATTTCAGTAGGCGAGAGCATAACTGCCCTCCTAATTGTTCCTGATGATTCACGCAGAATGCTAAGGTGGTCCCTTTTTTTTCAAATTGAATAGTTATATTATTATCTTTTTAATTTAATCATCACACCCTTTTCTCTTTTAAAGTCATCCAGGATTATTGGGACGGGAACATTAATGTGGAACAATTTTTGTAGTGGAGAAAGATTTCACTGACGAGAATGTCACATTTGAGAACTCACCTCCCCAGGTGCTTAGTTTTCACTTGTTCCTTTTGTTTTTACTAAACTTGTTCGTGTTCCATAGAGAGATGCCTATGCGATGAGTGCAAAAAGCTGAGCTACCATTTGTGGACTTGTGGTGCAGCGGTAAGGGCATACAGATGTAGTTTGAGTAACAACAGATAGATGTGCCTTCTACAATTGCAGGTATGCTCATCCGTTCAACTCTTGGTTAAATCACTTCATTATTTAAGATAATACACCAGCATTACTTTTGTTAATTTATGAGATTTTGACTTATGTCCAATTAATAAAGAATTCAGGGTACGTTATATTTGCACTATGGCAAACAATAAGTTTAATCATTTTTAAATTGTTGTGTTTTTCTCCTTCTTATGTTATGCTTGGATGGATGAACACATTCAGGTGATATTATTACTGGAAGACGAGAAATCGGATTATGTTCCTAGGTCGTCCATGGGAACTATTTGGGAGGCTTGCGTTTGCACACAATTTAGTGTACACCTGAGTCCAAATATTTCAGGGAAGTTAATTGTTAAAAAATTATCACTGTTTTTTCATGGGTGTCAACATAAAATTGCCAGAGATTTATACATAGATCATGGTAATTAAGGTTGGCAATTCTCAATAGACTGATGCTAATGTATCCAGTCTTGCACTTTGGTCAGTGACATTCACATTCCTTTGTAGCACTTCCTGTCTTCCTGCAAATTCTTGAGTTGTCTTTCATGCAGAAAGGTGTCGATACTTAAAAGTTGATGTTTTGCCTCTGGCCATGACAGATTATGTGTATTGCTTGTAGTCTTTTGTTTGGTGAACAAAGTAATCTCTAGAATTGTACTGATTGCACTCGCAGTTGTGAACTTTTGTTCTGACCATGTATGTTTTCATGCATAGAGAAAGAAGAAAATCTGTACCTACTTAAAAAAAAATGGAATACTTCTATTCACATCTCGTTTCGTCAGTCATCCGTCTTGGTAGCGCCCGTTTAGTCCTCTTGATGTGTCGTGAGCGATTGGAGAGCAACAAACAAGAGCTGTTTTTCTTCCCAGTTTGTAATGGGGATTTTTCTTTCTCCCTTGGAATGATGGGAATTGGATATGTACATGATGTTCCGTACTTCCGTTCCACACTTAGCTAAAAACACTTTTCAGTAGTGGACGAATATTTACCACAGTGTGGATTTGGATCCCAGGGTAGCGACTCGATAGCCAGTCCACGCCTAACCAAAATGAGCCATGTTTGTTTTTTCGTGGCAACGCATAGGCATGCTATTATAGAAAAAAAAAATTTGAAGACGAGTTTATGAAGTCGGGGTCCCACATGTCATATGTGCGCCCGTTGTTTTTCTGTCATTTCTCTGGTTACTACTGCACGAACACGGACCAACTCTGTTTTCTCCTTTCTCTGTTACCGCACGGACACGGCCCAACTCCATATTCTCCTTCCGTAGAACCAACCACTGTAATATCTCCTGTAATTTTTTTTACGGTGAATCTTAAATCTTCTTTATTATATGCTTCGTTGACAAAACGTATATTGCATTTTGATTATTTGAATTGCTTTATTAAATATTTGGATATGTTTGATGTTCAAGGTGTTTTGTTTGTGCTTTATTTTCATAGTAGTCTTCTATCTATGTTGTCTTTTCATATTCTTATAAACACCATGAGATTGGTTATTTAACATATTTTCACCTGATATAATTTTGCATTTCCCGTGGCAATGCACGGGCACCCTCCTAGTATACAATCGGTTTTGTTATTCCTATAATTTCAAGCTTCATACAGTGAACTAAGTTAGTTCCTTTTTTTCATCACAATACTACACCTATAGAGTACCCAATATGACAATGTATTAGAAAAACTAAAAGATAAGCAGTGCACCCACAAACTACTTCATTAACTAAACATGACCAAATAAAAAAGGGCAAGGAAGGCAACTGACATACTTGAGAAACATTCTTGCTGTCCTCAGGATAATTAAAAGTAGAGTAGGATACATCCTGATTAACTCATCATGAACATGGAGAATGATTAAATAAAAGAATTCGAGGAAGCTTTTCAACAATGTTTTTATGTCGAGAACATAATAAGACAGGAATTCAACTCTTCAGGAGACCATAATTAAGTCAGCGATGACTTGGGATATCAATACCAATGGTGATCATCACCATAGGTAACACAGCCACATATATATACGGTTTTAGTTCTGCGCACAATTTCTTGGAAGGGTAGATAATAATACTAATCCAGTAAAAGGAAAAGGCTTACTTTCATTGTCAGGCTGCCATGAACTGCTGCTGAAGATCTTCTATTGCAGCTACCTCTTTCTCCCCAGCTGTATGTCACAAACAACTAGGTAAATCACACGAATCTCCACAGCTGTATGTGCGGTGAATCGAGTGTTGAGAGGTCGCAGCGCCGATGCCGGCACCGGCGGCGAGTCACCCGGCCGGGAACTAGTCACCCACGAGGTCGCCGGCCGGCGGCCAGGGGTTGCAGCGCGCGTGAGATTTTTTTTTTTTTTACTTTTCTGCTCGTTTTTTTTTCGCTCCATCCGAGGAAGGGATAAGGTATATATATATTACTGTACCGCACCCTAATAACTAAAACACACCCATCACACCCTACACCCCCACCCCTATACCTGGCCAAATGGGCCGTGCCAAGCCGGGCCGGCCCAAGCACGGCCGCACTGTAGAAGGCCCAGGCCCGGCACAGCACGCCGGCCTGTGGGCCGTGCCGGCACGGCCCGTTTACCCGTGCCGTGTCTGGGCCGACGCCATAGCCCGTGGGCCAGCACGGCACGGCACGTTTACTGTAGAGGGCTGGTACGGCACGGCACGGCCCGCGAGCACGGCACGGCACGGGAGCGGCCTAGGGTAGGCACACCGCGCACGTGGCGCCAAGCGGCCGAGCCACCGAGGGCAGCCGCGGGGCCAGGCGGCGGGAAGCGCGCGTCGCTGCGTTCGCGCGTGGCGCATGGCAGGCGGCGTCGCGACGTGTTGCTGGGGCTGGTAGGCTGGGTCGCTCTCGCTCTGACTGCCTCCGTCACTCCGTGCCTCGTTGCCTCGTTGGGAGCAGCCGAGACGGCGACAGGCGACTCAGCGAGACCCCGTACGGCGGCCGAACAGCTAGTCAAACGACGAATGCGAGAGTGCCACGTGTCCCCAACGGCTAGTGAGCTAATCCAACGACCGCTGTTTTTGAGAAGTAGCCGTTGGAGAGCAAAAAAATGGAAAAAAAATTCGAAAAAAATATGAAATTTATTTCTATAAATAGGACACCCACCGGAGCATTCTGAATCATCCATACCTCCCATTTTGTGCTCTGTTGTGCTCTTTCGTGTGATAGATCGATTTTTTGATTTAGACAAAATTTTGTCTAAAATCAAAAATAGTTTGTGACTAAAAATAGTGCATACAAGAGGTGTAAAGCCAAGCAAAGGTGGTAAGAAAGAAGTACGTCATATATTCAGTTTTATGTATTATTTTATTTTATGTTATGCGAATAAATATTCTGAAATTTGTTTATGTTGTTTTAAATTTTCAGAATGGACGAATCGAACATTCCATCGTTCACGTTAGGTGATTTCGACCCTAACTACGTGTCGAGGTCATTCCCAACTGGTGAGTATGATGCCACCGGATCGGCTCCAACACCACCAGTTATGGAGCCACCGGCGGGTTCAGAAGCATCCGGCACTATGAGTGGGAGTGCATCGACGAACACCGGCTCAAAGAGATCAAGAACTTCCGGTGTTTGGCAACATTTCGATGAGGTGGCCATGACAGGCCCTGATGGAAGGCAGGTAACATTCGCGAGATGTAGAATATGCAAAAATAAGTTATCTGCAAAATCATCTGGTGGAACAGGACATTTGAAGCGGCATGCCGAGGCTTGTGCAAAGAAGCAAGGAATCCAACTACGACAGCAACAACTACTACTAAATCCTGATGGTACGGTACGTACGTGGGAGTATGATCCTATGGTAGCTCGAGAAAATCTTGCCCGTTTAATTGCTAGACAAGATTTACCCTTGAACTTTGGTGAGAGTCCTGCATTTGAAAATTACATAAAAAATTCTCATAATCCTAGGTTTCAAGCTGTTAGTAGACAAACCACAACCCGTGATTTGAAAAATGTCTATGACAAAGGTTATGAATCACTGAAGGAATTATTTAGTACATGCACCTTTTCTGTCAGTGTCACCTCAGACATATGGAGTAGTAGGGCTAAAGAGGATTACCTTAGTGTAGTTGTACATTTCATTGATGATGATCGGCAAATGCAAAAAAGAGTTCTTGGCTTAAGGTTAATTGATGTTTCACATACCGGTGAAAATATAGCAGAGAGAATTCGAGAGGTTATTGATGAGTTTAACCTTGCAGATAAAATTTTTGCTGTAACAATGGATAATGCATCTGCAAATTCTAGGGCCATGGAAATTCTACAACCATTATTTTGTATTTATGCTCAATCATTTCTTCTGCATCAGCGTTGTGCATGCCATATCATTAATCTAATTGTTAAATGTGGGTTTAAGAGAGTTAATGTACACATCGACGCTGTTCGTCAAGCAATCACGTGGTTAACTGCTTCAAACCCACGGATTGCACAGTGGAAAAGGTATTGTTGTGCATCGGGTGAGCCCCCACGTAAGTTTTTAACCGATGCAGACCATCAGTGGAATGCCACTTATTTTATTTTAAAGGTTGTATTACCTTACAAGGATTTACTTACTGTTTTCCTTCAAACACGTAATGGCCCAAAAAACAGTGACGGCCAGCCAATACTGACTGATCATACCTGGCACATTGTTGAAAGGTTCAATCAATTTCTTGAAACGTTTCATGACTGTACTCTTCTGTTATCTCAAGTATATTATCCAACAGCTAATTTAATTTTGCATAATATTCTTGAAATTGCCACTTTGTTGAAAGAGTATGAAAATGATGACCTTTTAATGCCCGTTGTCTTTAATATGAAACAAAAATATCTTAAATATTGGAAAGACATCCCCATGTTGTATTCTTTTGCATTTATTCTTGATCCTAGGGGAAAATTACGGGGATTCCTCAATATTCTTTCACTTATTGGAGATATTATTAATGTTGATTATTCTACCTATTATGCTGATGTCAAAACTAAATTCTATGAGGTATTTTGAAAGTATGAATTAAAGTTTCAGGGAGATCGCTTGCAAAGACCCCCACCTGTCCCTGCAGCAGGTAAGAAAAAATTACAGTGGAGCAGAATTTGGGGCGGTTCATCTTCTAGCCATGGTGGTGGTACCAGTTCATCAGCAGCAAGTGGGGACGCTAGATCGCATGGTCCTGCCGAAGAGTTGTCCAACTATTTGGATAGCGATGCCATCAGGCATGAAACGTCAGACTTCAACGTACTCGGGTGGTGGAATGATCATAAGATGTCATATCCTGTGCTATCAAAACTAGCACAGGATGTGTTGACGGTGCCCGTATCTTCGGTATCCTCCGAATCAGCCTTCAGTCTATGCGGAAGAATTATCGAGGATAGGAGAACAAGTCTGAGCAGCGATCATGTGGAAATACTATTAAGCGTCAAAGACTGGGAACTTGCTGCAGAACATACCCAATACACTGCTGACAACCAAGAATTGGCCGCACAGTTCGAAAACCTTTATTTAGATGACGAACAATTAGGGTAGCTAGTTTATATTTTTTAAGTATTGACCTGTTGGCTGTACTCTTTTCTTTGTCATGGTTTTCTCAAATATGAGTTTTTACATGACAAAGTTTTTAACGAGGCAGCATGTATCATGTAAACATCAATAAAGGTCATTACTCTTTTTTT
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| CDS seq | ATGGACGAATCGAACATTCCATCGTTCACGTTAGGTGATTTCGACCCTAACTACGTGTCGAGGTCATTCCCAACTGGTGAGTATGATGCCACCGGATCGGCTCCAACACCACCAGTTATGGAGCCACCGGCGGGTTCAGAAGCATCCGGCACTATGAGTGGGAGTGCATCGACGAACACCGGCTCAAAGAGATCAAGAACTTCCGGTGTTTGGCAACATTTCGATGAGGTGGCCATGACAGGCCCTGATGGAAGGCAGGTAACATTCGCGAGATGTAGAATATGCAAAAATAAGTTATCTGCAAAATCATCTGGTGGAACAGGACATTTGAAGCGGCATGCCGAGGCTTGTGCAAAGAAGCAAGGAATCCAACTACGACAGCAACAACTACTACTAAATCCTGATGGTACGTTTCAGGGAGATCGCTTGCAAAGACCCCCACCTGTCCCTGCAGCAGGTAAGAAAAAATTACAGTGGAGCAGAATTTGGGGCGGTTCATCTTCTAGCCATGGTGGTGGTACCAGTTCATCAGCAGCAAGTGGGGACGCTAGATCGCATGGTCCTGCCGAAGAGTTGTCCAACTATTTGGATAGCGATGCCATCAGGCATGAAACGTCAGACTTCAACGTACTCGGGTGGTGGAATGATCATAAGATGTCATATCCTGTGCTATCAAAACTAGCACAGGATGTGTTGACGGTGCCCGTATCTTCGGTATCCTCCGAATCAGCCTTCAGTCTATGCGGAAGAATTATCGAGGATAGGAGAACAAGTCTGAGCAGCGATCATGTGGAAATACTATTAAGCGTCAAAGACTGGGAACTTGCTGCAGAACATACCCAATACACTGCTGACAACCAAGAATTGGCCGCACAGTTCGAAAACCTTTATTTAGATGACGAACAATTAGGGTAG
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| Protein seq | MDESNIPSFTLGDFDPNYVSRSFPTGEYDATGSAPTPPVMEPPAGSEASGTMSGSASTNTGSKRSRTSGVWQHFDEVAMTGPDGRQVTFARCRICKNKLSAKSSGGTGHLKRHAEACAKKQGIQLRQQQLLLNPDGTFQGDRLQRPPPVPAAGKKKLQWSRIWGGSSSSHGGGTSSSAASGDARSHGPAEELSNYLDSDAIRHETSDFNVLGWWNDHKMSYPVLSKLAQDVLTVPVSSVSSESAFSLCGRIIEDRRTSLSSDHVEILLSVKDWELAAEHTQYTADNQELAAQFENLYLDDEQLG |
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| Function | Putative AC transposase [UniProtKB/Swiss-Prot:P08770] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0801700 | OsNip_02t0801700-01 | Chr02 | 34170247 | 34180842 | + | RAP2018-11-26 | ||
| CDS seq | ATGGACGAATCGAACATTCCATCGTTCACGTTAGGTGATTTCGACCCTAACTACGTGTCGAGGTCATTCCCAACTGGTGAGTATGATGCCACCGGATCGGCTCCAACACCACCAGTTATGGAGCCACCGGCGGGTTCAGAAGCATCCGGCACTATGAGTGGGAGTGCATCGACGAACACCGGCTCAAAGAGATCAAGAACTTCCGGTGTTTGGCAACATTTCGATGAGGTGGCCATGACAGGCCCTGATGGAAGGCAGGTAACATTCGCGAGATGTAGAATATGCAAAAATAAGTTATCTGCAAAATCATCTGGTGGAACAGGACATTTGAAGCGGCATGCCGAGGCTTGTGCAAAGAAGCAAGGAATCCAACTACGACAGCAACAACTACTACTAAATCCTGATGGTACGTTTCAGGGAGATCGCTTGCAAAGACCCCCACCTGTCCCTGCAGCAGGTAAGAAAAAATTACAGTGGAGCAGAATTTGGGGCGGTTCATCTTCTAGCCATGGTGGTGGTACCAGTTCATCAGCAGCAAGTGGGGACGCTAGATCGCATGGTCCTGCCGAAGAGTTGTCCAACTATTTGGATAGCGATGCCATCAGGCATGAAACGTCAGACTTCAACGTACTCGGGTGGTGGAATGATCATAAGATGTCATATCCTGTGCTATCAAAACTAGCACAGGATGTGTTGACGGTGCCCGTATCTTCGGTATCCTCCGAATCAGCCTTCAGTCTATGCGGAAGAATTATCGAGGATAGGAGAACAAGTCTGAGCAGCGATCATGTGGAAATACTATTAAGCGTCAAAGACTGGGAACTTGCTGCAGAACATACCCAATACACTGCTGACAACCAAGAATTGGCCGCACAGTTCGAAAACCTTTATTTAGATGACGAACAATTAGGGTAG
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| Protein seq | MDESNIPSFTLGDFDPNYVSRSFPTGEYDATGSAPTPPVMEPPAGSEASGTMSGSASTNTGSKRSRTSGVWQHFDEVAMTGPDGRQVTFARCRICKNKLSAKSSGGTGHLKRHAEACAKKQGIQLRQQQLLLNPDGTFQGDRLQRPPPVPAAGKKKLQWSRIWGGSSSSHGGGTSSSAASGDARSHGPAEELSNYLDSDAIRHETSDFNVLGWWNDHKMSYPVLSKLAQDVLTVPVSSVSSESAFSLCGRIIEDRRTSLSSDHVEILLSVKDWELAAEHTQYTADNQELAAQFENLYLDDEQLG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 2.297632 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g55830 | RBH | 0.0 | 0.0 | 0.189826 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0801700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0010930 | SBH | 0.230638 | 12.880753 | 3.235260 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0000411 | RBH | 0.0 | 0.0 | 0.075276 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010900 | SBH | 0.856493 | 3.690874 | 5.695251 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0010760 | SBH | 0.052877 | 0.173306 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0379100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0010680 | SBH | 0.171856 | 0.250901 | 0.378517 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0407200 | RBH | 0.0101835 | 0.0100955 | 0.0138495 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0011160 | SBH | 0.227471 | 0.116276 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0010770 | SBH | 0.448355 | 2.634545 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G011100 | SBH | 0.021101 | 0.315735 | 0.376226 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017800 | RBH | 0.0 | 0.0 | 0.0 |
