Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_02g0693200 OGI:02080180 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr02:28464743-28467359
Gene Symbol OsDjC20
DNA seq

GGAAACTGCGTGCATGCATTTCTTGCAGCAAAAATACATTAGTATACGACAGAATCCATTGTTGTGTTACAAAGAACAGAGAGATGCCCTGCCGTATCCATAGTTGTGTTAAAAGAAACAGCTAAGCATCCAATTGGCCTCAAAGAAAGTACTGAAGAAGCTCATGGACAAATAAGATGTACCTATAGATCAATGGGGCTCCAATTCCCTCAAATGCCGGGCCCTAGAAAATGAAATCATAAATACTGTATTCGAAGTGTTCACACTACTATTAGGAATCATGCCATGAAGTCTTAAGTCTTAACCAATATGCAAAACAAATTTAGCATCAGGCTCAAATGAAATGCTTTACCATTTTGAAGAATGGTCTATGCCAAGACCATTGCAGGTAAGTATCATACCCTTAAACCTTGTAAGGTACTCCTAAAAGCGAGGGAAAGACAGCAAGAAAAATCAACACAAAGCGTGTAGAAGAGGAATATGGAAGGCCAATTATAGAAGACACCTTACACGCAAAGTATATCGATTTAACTCATAACATCCGGAAAGGTCGTATTCAAGGCGCTTAGCTGGATCACTTAGAACTGAAAAAACGGAACATAAAAAAAAGTGAATCAGGCAATGACGATAACATTTATCTCTAGGAAGTACATCCATATTGAGATCCCAAATTTATCTCTAGGAAGTAAATGAGGATAATAAGATCATCTGTGCCTACATAATGGAGAGTGGAAAATACCTGTGTAGGCTTCATTGATCTCCTGAAATTTAGCTGTGACATCATTATCCCCCTTATGCTTGTCTGGATGCCACATCTGTGGATGAATTATCAGTTACAGTGTGTTAATGTATTATTATTTGCGTACCCCGAAAGAAGTCCAATAACAGCATACCAAAGCTAATCTTCTATAACTCAATTTGATGGTGTCATCGGATGCATCGTAATCAACCTCCAGAACTTTGTAATAGTCCTGCTATTCCAAATGAATATAATGAATAAGACGTATTAAAAAAAAGTGTACCTGTGCAAGAAATAGTATAATTGATTATGGACACTTTTCAGAATATGAATGGCACGGTAGTCCACGTCACGAGTACATAGGCGGTAAAGTGAGTTTATTTTGGATTAGCATGACTTATTAAGATTAAGTGCCCAAATGATAGCTCACAGCGCAGGTGAGTTGCATATTAACAGAGTTGTAAAAACCATATAATAACACATATTGAGTTCATACCATAGCGAAGCATACAAGTGGCAATATACAGGCTTGAATTGCCTAGCAACCCCGATGTCTTGTAAATAAAGATACACTAAATCGCATGCTGAGTAATAAGTTGTTTGGTTGTTTTGCACCCTTTAACCACCCACAAGGCCACACTCTATTAATAGATGTTTTATGCTTGAATAATAATTCCTTCACTTCGTCAGTAGATAACATTTGCTGTGAAGAATAGTACAGACAAAGCAACGCATCTGCCAAGAAAGTAGAACCTAGTTTGTGCAATTCACAGCATTTGTCTTAGATGAATAAAGGACATCAAGGTAAGGAAATTGGTTTAAGCAAAAACAAACATCAGCAATGCATTGATCAGCATTTTCCAAATGGCTGCAAAAGTTCAGGTTAAAAAAGAAACAGCTAACAGGACTCCTATAATATTGTAGGGTGGTGTTCGACAAGGAGACCTGACGGGCCGTTACAATACAATGGTGCCACAGATTGAACCTAAACACCAGTCTTCGTCTCAAACCCTCAGTGAGAGGGTTGTACTAAAAGGCTCAATTCACCGATTACAGACCATAGGTTAAATGTCGATCCTGTGCTGCTGCATTAATCAAGAACCTAGAAACATTTGCGCGAGGAAGATGAACCTAAATCCACCATACGGAATTCGGCCACTCGGCACAGTTGACCATGACTAAATCTGGCCACCAGCCAAACAATCATATGCTGTCCACTAGCGAGACCGCGGGCAAAGCAATACCACAGTAGCTCCAGTACTATTTGTAGCCATCAATCACAGTATCAAAATGCCCCAGGAGAAAAAAAAGGTTTGGTCCAGAACCAACCAACAAATTATTGGGAAGGCCTATCCACCTTTTTCCTGGCCACAGTGAACGAAGATACAAGTCATCGGCCACTCCAATAATAGAAAACAACTGGTTCGCGCAGCCGCAGCACAGCTCTCTTATCCTTCTATACAAGCGGCACGACCAAAACCAAATCCAGCCATAGACTGACGAACTGAAGCTCAAACACTCGATCTCTCTCTCTCGCGCGCGCGCGGGAATAATACAACCGGAATCGCGGGGGGACGCGTACCTTGTGGGGAGGCTTCTCGCTTGCTCCGTCCATGCAGCGTAACAATTCATCACCCCCAGCTGATCCTCTCTTCTCGTCGTCGCCTGTTTCCCTTCCTCGTGTCCGCCGCGCGCGTTGGCGGCGGCCCGGCTCCCCGGGCTTGGCTTGGGGGATCCGGGAGGAGGAAGACGAGGGGCGAATCGATCGGAGGCGAGGGCGAGGCCGAGCGAGAGGCCGCCGGAGTGGGTGGGATCGGAGCCGGAAGGAGTTCCTTGTCCTCTCCTCCCTTTACTTTATTTCCTATGCTTTTCTATTCC

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CDS seq

ATGGACGGAGCAAGCGAGAAGCCTCCCCACAAGGACTATTACAAAGTTCTGGAGGTTGATTACGATGCATCCGATGACACCATCAAATTGAGTTATAGAAGATTAGCTTTGATGTGGCATCCAGACAAGCATAAGGGGGATAATGATGTCACAGCTAAATTTCAGGAGATCAATGAAGCCTACACAGTTCTAAGTGATCCAGCTAAGCGCCTTGAATACGACCTTTCCGGATGTTATGAGTTAAATCGATATACTTTGCGTGAGTACCTTACAAGGTTTAAGGGTATGATACTTACCTGCAATGGTCTTGGCATAGACCATTCTTCAAAATGGGCCCGGCATTTGAGGGAATTGGAGCCCCATTGA

Protein seq

MDGASEKPPHKDYYKVLEVDYDASDDTIKLSYRRLALMWHPDKHKGDNDVTAKFQEINEAYTVLSDPAKRLEYDLSGCYELNRYTLREYLTRFKGMILTCNGLGIDHSSKWARHLRELEPH

Function Chaperone protein DnaJ [UniProtKB/Swiss-Prot:Q892R1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_02g0693200 OsNip_02t0693200-01 Chr02 28464743 28467359 - RAP2018-11-26
CDS seq

ATGGACGGAGCAAGCGAGAAGCCTCCCCACAAGGACTATTACAAAGTTCTGGAGGTTGATTACGATGCATCCGATGACACCATCAAATTGAGTTATAGAAGATTAGCTTTGATGTGGCATCCAGACAAGCATAAGGGGGATAATGATGTCACAGCTAAATTTCAGGAGATCAATGAAGCCTACACAGTTCTAAGTGATCCAGCTAAGCGCCTTGAATACGACCTTTCCGGATGTTATGAGTTAAATCGATATACTTTGCGTGAGTACCTTACAAGGTTTAAGGGTATGATACTTACCTGCAATGGTCTTGGCATAGACCATTCTTCAAAATGGGCCCGGCATTTGAGGGAATTGGAGCCCCATTGA

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Protein seq

MDGASEKPPHKDYYKVLEVDYDASDDTIKLSYRRLALMWHPDKHKGDNDVTAKFQEINEAYTVLSDPAKRLEYDLSGCYELNRYTLREYLTRFKGMILTCNGLGIDHSSKWARHLRELEPH

Gene Transcript Chromosome Start End Strand Source
OsNip_02g0693200 OsNip_02t0693200-03 Chr02 28464764 28465165 - RAP2018-11-26
CDS seq

GAGTACCTTACAAGGTTTAAGGGTATGATACTTACCTGCAATGGTCTTGGCATAGACCATTCTTCAAAATGGGCCCGGCATTTGAGGGAATTGGAGCCCCATTGA

Protein seq

EYLTRFKGMILTCNGLGIDHSSKWARHLRELEPH

Gene Transcript Chromosome Start End Strand Source
OsNip_02g0693200 OsNip_02t0693200-02 Chr02 28464767 28467309 - RAP2018-11-26
CDS seq

ATGGACGGAGCAAGCGAGAAGCCTCCCCACAAGGACTATTACAAAGTTCTGGAGGTTGATTACGATGCATCCGATGACACCATCAAATTGAGTTATAGAAGATTAGCTTTGATGTGGCATCCAGACAAGCATAAGGGGGATAATGATGTCACAGCTAAATTTCAGGAGATCAATGAAGCCTACACAGTTCTAAGTGATCCAGCTAAGCGCCTTGAATACGACCTTTCCGGATGTTATGAGTTAAATCGATATACTTTGCGTGAGTACCTTACAAGGTTTAAGGGTATGATACTTACCTGCAATGGTCTTGGCATAGACCATTCTTCAAAATGGGCCCGGCATTTGAGGGAATTGGAGCCCCATTGA

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Protein seq

MDGASEKPPHKDYYKVLEVDYDASDDTIKLSYRRLALMWHPDKHKGDNDVTAKFQEINEAYTVLSDPAKRLEYDLSGCYELNRYTLREYLTRFKGMILTCNGLGIDHSSKWARHLRELEPH

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 2.067492 1.171909 7.431432

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0549600 SBH 21.424591 17.743742 120.471420
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g46640 RBH 1.068985 0.690400 1.531570
Nipponbare | IRGSP 1.0 | RAP-db Os02g0693200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0029790 RBH 1.673846 22.852764 3.094884
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0029860 RBH 0.298202 3.438867 2.250182
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0029720 RBH 2.682557 12.784140 11.931894
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0029320 RBH 0.348008 0.406716 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0029530 RBH 9.070883 10.448874 17.620646
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0462400 RBH 9.992031 23.512663 66.133669
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0029330 RBH 0.444559 1.611427 1.420927
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0490200 RBH 20.1376175 53.315357 40.397045
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0029630 RBH 0.359645 0.225643 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0029370 RBH 0.831056 13.199796 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0029680 RBH 14.799801 19.110928 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0029520 RBH 2.021918 1.958203 1.607433
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0029200 RBH 0.233332 9.541669 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G029780 RBH 0.565033 2.103662 1.978731
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0029550 RBH 1.153514 31.186899 5.721833
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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