Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0569400 | OGI:02062140 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:21690378-21692185 | ||||||||
| Gene Symbol | CYP76M8, CYP76M8 | ||||||||||
| DNA seq | AGAGCACGAGCTTACCTAGCTAGGTCCAGAGAAAAAACTGATACAACGATAGTAACAATAACAGTAGATAGTGTGTTACTACTGCACGGTTCGTCGCAAACAATGGAGAATAGCCAGATGTGGCTTCTGTGGGGAGCCCTCTCCGTGGCGCTCTTCTTCTACTTCTCCACCCTGCGACGACGCTACGCCGGCGGCAAGCCCCTCCCCCCGGGCCCGACGCCGCTGCCGCTCATCGGCAACCTACACTTGGTCGGCGGCGGCACGTTCCACCACAAGCTCAGGGACCTGGCACGCGTCCACGGCCCCGTCATGACGCTCAAGCTCGGACTCGCCACCAACGTGGTCATCTCCTCCCGGGAGGCCGCCATCGAGGCGTACACCAAGTACGACCGCCACCTCGCCGCGCGCGCCACCCCGGACACCTTCCGCGCCTGCGGCTTCGCCGACCGCTCCATGGTGTTCATCCCGAGCTCCGACCCGCAGTGGAAGGCCCTGCGGGGGATCCACGCCTCGCACGTCTTCACCCCGCGGGTGCTCGCCGCGGTGCGCCCCATCCGCGAGAGGAAGGTGGGCGACCTCATCGCCTACCTCCGCGCGCACGCCGGGGAGGAGGTGCTCGTCGGCCACGCCATGTACACGGGCATCCTCAACATGGTGTCCTTCTCCTACTTCTCCGTCGACATCGTCGACATGGGCTCGCAGATGGCCCGCGAGCTGCGGGAGGTGGTGGACGACATCATCTTGGTGGTCGGGAAGCCCAACGTGTCCGACTTCTACCCGTTCCTCCGGCCGCTGGACCTGCAGGGCCTGCGCCGCTGGACGACGAAGCGGTTCAACAGGGTGTTCTCCATCATGGGCGACATCATCGACCGCCGTTTGGCTCACATCCGCGACAACAAGCCGAGGCACGACGACTTCCTCGACTCAATCCTCGAGCTCATGGCTGCCGGCAAGATCGATCGTGTCAACGTGCTCAACATGTTGTTCGAGGCTTTCGTTGCCGGGGCTGACACCATGGCTCTTACCTTGGAGTGGGTAATGGCCGAGCTGCTCAAAAACCCGAGCGTGATGGCCAAGGCGCGCGCCGAGCTGAGGGATGTGCTCGGCGACAAGGAGATCGTGGAGGAGGCCGACGCGGCGAGGCTGCCCTACCTGCAGGCCGTGCTGAAGGAGGCCATGAGACTGCACCCGGTGGGCGCGCTGCTGCTGCCGCACTTCGCCATGGAGGACGGCGTGGAGGTCGGCGGCTACGCGGTGCCCAAGGGCTCCACGGTGCTCTTCAACGCGTGGGCGATCATGCGCGACGCGGCGGCGTGGGAGAGGCCCGACGAGTTCGTGCCGGAGCGGTTCGTGGAGAGGACGCCGCAGCTGGACTTCAGAGGGAAGGACGTGGAGTTCATGCCGTTCGGGTCCGGGAGGCGGCTGTGCCCTGGGCTGCCGTTGGCCGAGCGTGTCGTGCCGTTCATTCTGGCGTCGATGCTGCACACGTTCGAGTGGGAGCTCCCCGGCGGCATGACGGCGGAGGAGTTGGACGTGTCCGAGAAGTTCAAGACTGCCAATGTCCTTGCTGTGCCTCTCAAGGCTGTGCCTGTCCTGATCAAATAGTTGGACGACTATATTATTGGCCAGATCAATTACCATACTCGGCACCAGAATTATATTATTTTTAACGAATTTGTACTAGTGCACATTGAATAGAGAAGAAGCAAAACTATACAAGTATAAGCCTACACAGGAGAAAGAAAAAAAAATTCTATGCTATTGTAAAATGTCATATAATCTTTTTGCTCCGCCTGAGCCTCTTTGCC
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| CDS seq | ATGGAGAATAGCCAGATGTGGCTTCTGTGGGGAGCCCTCTCCGTGGCGCTCTTCTTCTACTTCTCCACCCTGCGACGACGCTACGCCGGCGGCAAGCCCCTCCCCCCGGGCCCGACGCCGCTGCCGCTCATCGGCAACCTACACTTGGTCGGCGGCGGCACGTTCCACCACAAGCTCAGGGACCTGGCACGCGTCCACGGCCCCGTCATGACGCTCAAGCTCGGACTCGCCACCAACGTGGTCATCTCCTCCCGGGAGGCCGCCATCGAGGCGTACACCAAGTACGACCGCCACCTCGCCGCGCGCGCCACCCCGGACACCTTCCGCGCCTGCGGCTTCGCCGACCGCTCCATGGTGTTCATCCCGAGCTCCGACCCGCAGTGGAAGGCCCTGCGGGGGATCCACGCCTCGCACGTCTTCACCCCGCGGGTGCTCGCCGCGGTGCGCCCCATCCGCGAGAGGAAGGTGGGCGACCTCATCGCCTACCTCCGCGCGCACGCCGGGGAGGAGGTGCTCGTCGGCCACGCCATGTACACGGGCATCCTCAACATGGTGTCCTTCTCCTACTTCTCCGTCGACATCGTCGACATGGGCTCGCAGATGGCCCGCGAGCTGCGGGAGGTGGTGGACGACATCATCTTGGTGGTCGGGAAGCCCAACGTGTCCGACTTCTACCCGTTCCTCCGGCCGCTGGACCTGCAGGGCCTGCGCCGCTGGACGACGAAGCGGTTCAACAGGGTGTTCTCCATCATGGGCGACATCATCGACCGCCGTTTGGCTCACATCCGCGACAACAAGCCGAGGCACGACGACTTCCTCGACTCAATCCTCGAGCTCATGGCTGCCGGCAAGATCGATCGTGTCAACGTGCTCAACATGTTGTTCGAGGCTTTCGTTGCCGGGGCTGACACCATGGCTCTTACCTTGGAGTGGGTAATGGCCGAGCTGCTCAAAAACCCGAGCGTGATGGCCAAGGCGCGCGCCGAGCTGAGGGATGTGCTCGGCGACAAGGAGATCGTGGAGGAGGCCGACGCGGCGAGGCTGCCCTACCTGCAGGCCGTGCTGAAGGAGGCCATGAGACTGCACCCGGTGGGCGCGCTGCTGCTGCCGCACTTCGCCATGGAGGACGGCGTGGAGGTCGGCGGCTACGCGGTGCCCAAGGGCTCCACGGTGCTCTTCAACGCGTGGGCGATCATGCGCGACGCGGCGGCGTGGGAGAGGCCCGACGAGTTCGTGCCGGAGCGGTTCGTGGAGAGGACGCCGCAGCTGGACTTCAGAGGGAAGGACGTGGAGTTCATGCCGTTCGGGTCCGGGAGGCGGCTGTGCCCTGGGCTGCCGTTGGCCGAGCGTGTCGTGCCGTTCATTCTGGCGTCGATGCTGCACACGTTCGAGTGGGAGCTCCCCGGCGGCATGACGGCGGAGGAGTTGGACGTGTCCGAGAAGTTCAAGACTGCCAATGTCCTTGCTGTGCCTCTCAAGGCTGTGCCTGTCCTGATCAAATAG
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| Protein seq | MENSQMWLLWGALSVALFFYFSTLRRRYAGGKPLPPGPTPLPLIGNLHLVGGGTFHHKLRDLARVHGPVMTLKLGLATNVVISSREAAIEAYTKYDRHLAARATPDTFRACGFADRSMVFIPSSDPQWKALRGIHASHVFTPRVLAAVRPIRERKVGDLIAYLRAHAGEEVLVGHAMYTGILNMVSFSYFSVDIVDMGSQMARELREVVDDIILVVGKPNVSDFYPFLRPLDLQGLRRWTTKRFNRVFSIMGDIIDRRLAHIRDNKPRHDDFLDSILELMAAGKIDRVNVLNMLFEAFVAGADTMALTLEWVMAELLKNPSVMAKARAELRDVLGDKEIVEEADAARLPYLQAVLKEAMRLHPVGALLLPHFAMEDGVEVGGYAVPKGSTVLFNAWAIMRDAAAWERPDEFVPERFVERTPQLDFRGKDVEFMPFGSGRRLCPGLPLAERVVPFILASMLHTFEWELPGGMTAEELDVSEKFKTANVLAVPLKAVPVLIK |
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| Function | Oryzalexin D synthase [UniProtKB/Swiss-Prot:Q6YTF1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0569400 | OsNip_02t0569400-01 | Chr02 | 21690378 | 21692113 | + | RAP2018-11-26 | ||
| CDS seq | ATGGAGAATAGCCAGATGTGGCTTCTGTGGGGAGCCCTCTCCGTGGCGCTCTTCTTCTACTTCTCCACCCTGCGACGACGCTACGCCGGCGGCAAGCCCCTCCCCCCGGGCCCGACGCCGCTGCCGCTCATCGGCAACCTACACTTGGTCGGCGGCGGCACGTTCCACCACAAGCTCAGGGACCTGGCACGCGTCCACGGCCCCGTCATGACGCTCAAGCTCGGACTCGCCACCAACGTGGTCATCTCCTCCCGGGAGGCCGCCATCGAGGCGTACACCAAGTACGACCGCCACCTCGCCGCGCGCGCCACCCCGGACACCTTCCGCGCCTGCGGCTTCGCCGACCGCTCCATGGTGTTCATCCCGAGCTCCGACCCGCAGTGGAAGGCCCTGCGGGGGATCCACGCCTCGCACGTCTTCACCCCGCGGGTGCTCGCCGCGGTGCGCCCCATCCGCGAGAGGAAGGTGGGCGACCTCATCGCCTACCTCCGCGCGCACGCCGGGGAGGAGGTGCTCGTCGGCCACGCCATGTACACGGGCATCCTCAACATGGTGTCCTTCTCCTACTTCTCCGTCGACATCGTCGACATGGGCTCGCAGATGGCCCGCGAGCTGCGGGAGGTGGTGGACGACATCATCTTGGTGGTCGGGAAGCCCAACGTGTCCGACTTCTACCCGTTCCTCCGGCCGCTGGACCTGCAGGGCCTGCGCCGCTGGACGACGAAGCGGTTCAACAGGGTGTTCTCCATCATGGGCGACATCATCGACCGCCGTTTGGCTCACATCCGCGACAACAAGCCGAGGCACGACGACTTCCTCGACTCAATCCTCGAGCTCATGGCTGCCGGCAAGATCGATCGTGTCAACGTGCTCAACATGTTGTTCGAGGCTTTCGTTGCCGGGGCTGACACCATGGCTCTTACCTTGGAGTGGGTAATGGCCGAGCTGCTCAAAAACCCGAGCGTGATGGCCAAGGCGCGCGCCGAGCTGAGGGATGTGCTCGGCGACAAGGAGATCGTGGAGGAGGCCGACGCGGCGAGGCTGCCCTACCTGCAGGCCGTGCTGAAGGAGGCCATGAGACTGCACCCGGTGGGCGCGCTGCTGCTGCCGCACTTCGCCATGGAGGACGGCGTGGAGGTCGGCGGCTACGCGGTGCCCAAGGGCTCCACGGTGCTCTTCAACGCGTGGGCGATCATGCGCGACGCGGCGGCGTGGGAGAGGCCCGACGAGTTCGTGCCGGAGCGGTTCGTGGAGAGGACGCCGCAGCTGGACTTCAGAGGGAAGGACGTGGAGTTCATGCCGTTCGGGTCCGGGAGGCGGCTGTGCCCTGGGCTGCCGTTGGCCGAGCGTGTCGTGCCGTTCATTCTGGCGTCGATGCTGCACACGTTCGAGTGGGAGCTCCCCGGCGGCATGACGGCGGAGGAGTTGGACGTGTCCGAGAAGTTCAAGACTGCCAATGTCCTTGCTGTGCCTCTCAAGGCTGTGCCTGTCCTGATCAAATAG
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| Protein seq | MENSQMWLLWGALSVALFFYFSTLRRRYAGGKPLPPGPTPLPLIGNLHLVGGGTFHHKLRDLARVHGPVMTLKLGLATNVVISSREAAIEAYTKYDRHLAARATPDTFRACGFADRSMVFIPSSDPQWKALRGIHASHVFTPRVLAAVRPIRERKVGDLIAYLRAHAGEEVLVGHAMYTGILNMVSFSYFSVDIVDMGSQMARELREVVDDIILVVGKPNVSDFYPFLRPLDLQGLRRWTTKRFNRVFSIMGDIIDRRLAHIRDNKPRHDDFLDSILELMAAGKIDRVNVLNMLFEAFVAGADTMALTLEWVMAELLKNPSVMAKARAELRDVLGDKEIVEEADAARLPYLQAVLKEAMRLHPVGALLLPHFAMEDGVEVGGYAVPKGSTVLFNAWAIMRDAAAWERPDEFVPERFVERTPQLDFRGKDVEFMPFGSGRRLCPGLPLAERVVPFILASMLHTFEWELPGGMTAEELDVSEKFKTANVLAVPLKAVPVLIK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0569400 | OsNip_02t0569400-02 | Chr02 | 21690803 | 21692185 | + | RAP2018-11-26 | ||
| CDS seq | CGCGCCTGCGGCTTCGCCGACCGCTCCATGGTGTTCATCCCGAGCTCCGACCCGCAGTGGAAGGCCCTGCGGGGGATCCACGCCTCGCACGTCTTCACCCCGCGGGTGCTCGCCGCGGTGCGCCCCATCCGCGAGAGGAAGGTGGGCGACCTCATCGCCTACCTCCGCGCGCACGCCGGGGAGGAGGTGCTCGTCGGCCACGCCATGTACACGGGCATCCTCAACATGGTGTCCTTCTCCTACTTCTCCGTCGACATCGTCGACATGGGCTCGCAGATGGCCCGCGAGCTGCGGGAGGTGGTGGACGACATCATCTTGGTGGTCGGGAAGCCCAACGTGTCCGACTTCTACCCGTTCCTCCGGCCGCTGGACCTGCAGGGCCTGCGCCGCTGGACGACGAAGCGGTTCAACAGGGTGTTCTCCATCATGGGCGACATCATCGACCGCCGTTTGGCTCACATCCGCGACAACAAGCCGAGGCACGACGACTTCCTCGACTCAATCCTCGAGCTCATGGCTGCCGGCAAGATCGATCGTGTCAACGTGCTCAACATGTTGTTCGAGGCTTTCGTTGCCGGGGCTGACACCATGGCTCTTACCTTGGAGTGGGTAATGGCCGAGCTGCTCAAAAACCCGAGCGTGATGGCCAAGGCGCGCGCCGAGCTGAGGGATGTGCTCGGCGACAAGGAGATCGTGGAGGAGGCCGACGCGGCGAGGCTGCCCTACCTGCAGGCCGTGCTGAAGGAGGCCATGAGACTGCACCCGGTGGGCGCGCTGCTGCTGCCGCACTTCGCCATGGAGGACGGCGTGGAGGTCGGCGGCTACGCGGTGCCCAAGGGCTCCACGGTGCTCTTCAACGCGTGGGCGATCATGCGCGACGCGGCGGCGTGGGAGAGGCCCGACGAGTTCGTGCCGGAGCGGTTCGTGGAGAGGACGCCGCAGCTGGACTTCAGAGGGAAGGACGTGGAGTTCATGCCGTTCGGGTCCGGGAGGCGGCTGTGCCCTGGGCTGCCGTTGGCCGAGCGTGTCGTGCCGTTCATTCTGGCGTCGATGCTGCACACGTTCGAGTGGGAGCTCCCCGGCGGCATGACGGCGGAGGAGTTGGACGTGTCCGAGAAGTTCAAGACTGCCAATGTCCTTGCTGTGCCTCTCAAGGCTGTGCCTGTCCTGATCAAATAG
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| Protein seq | RACGFADRSMVFIPSSDPQWKALRGIHASHVFTPRVLAAVRPIRERKVGDLIAYLRAHAGEEVLVGHAMYTGILNMVSFSYFSVDIVDMGSQMARELREVVDDIILVVGKPNVSDFYPFLRPLDLQGLRRWTTKRFNRVFSIMGDIIDRRLAHIRDNKPRHDDFLDSILELMAAGKIDRVNVLNMLFEAFVAGADTMALTLEWVMAELLKNPSVMAKARAELRDVLGDKEIVEEADAARLPYLQAVLKEAMRLHPVGALLLPHFAMEDGVEVGGYAVPKGSTVLFNAWAIMRDAAAWERPDEFVPERFVERTPQLDFRGKDVEFMPFGSGRRLCPGLPLAERVVPFILASMLHTFEWELPGGMTAEELDVSEKFKTANVLAVPLKAVPVLIK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.138494 | 4.434231 | 2.803097 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0480600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g36070 | RBH | 2.278663 | 2.512793 | 0.721474 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0569400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021830 | RBH | 0.0 | 0.0 | 0.344490 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021930 | RBH | 0.0 | 0.0 | 0.861008 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021940 | RBH | 0.0 | 0.0 | 1.179172 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021620 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0021590 | RBH | 0.0 | 0.0 | 2.452062 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0356900 | RBH | 0.0644505 | 0.25374 | 0.0352225 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0021320 | RBH | 0.0 | 0.0 | 0.200834 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0384000 | RBH | 0.060711 | 2.6806815 | 0.006304 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021760 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021500 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021960 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021670 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021490 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021950 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021710 | RBH | 0.0 | 0.0 | 2.977407 |
