Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_02g0189566 OGI:02014990 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr02:4966920-4967015
Gene Symbol -
DNA seq

ATGAACTACCTCAGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCACCATCAGGCTCCACGCCCTTCTCGGGAACAAGTAA
CDS seq

ATGAACTACCTCAGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCACCATCAGGCTCCACGCCCTTCTCGGGAACAAGTAA
Protein seq

MNYLSPDLKRGNFTDDDDELTIRLHALLGNK
Function Transcription factor MYB3 [UniProtKB/Swiss-Prot:Q9S9K9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_02g0189566 OsNip_02t0189566-00 Chr02 4966920 4967015 + RAP2018-11-26
CDS seq

ATGAACTACCTCAGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCACCATCAGGCTCCACGCCCTTCTCGGGAACAAGTAA
Protein seq

MNYLSPDLKRGNFTDDDDELTIRLHALLGNK
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0874300 SBH 0.887465 1.453460 2.295315
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g09670 RBH 0.404502 0.445714 0.416415
Nipponbare | IRGSP 1.0 | RAP-db Os02g0189566 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0006760 RBH 0.000000 0.000000 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0006910 RBH 0.000000 0.000000 0.720726
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0006690 RBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0006630 RBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0006680 RBH 1.377414 0.000000 4.231245
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0084100 RBH 0 0.0746785 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0006640 RBH 0.214545 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0087000 RBH 1.056736 2.3448795 3.0971225
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0007070 RBH 0.429440 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0006640 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0006920 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0006930 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0006680 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G006790 RBH 0.000000 2.285599 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0006760 RBH 0.000000 0.000000 4.158488
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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