Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0811001 | OGI:01103130 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:34461157-34464358 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATATGGGAATTGCTTTAGATGGCCTTCGATCTACTTTTGTGCTGTTAAATACCTCAGGGAGGAAGTCTTTTGACTCTGCTATAGATGTCTCCACAAGCACCTTAACAGCTACTTCATCGTTATTTTCCAGTATGCCATGATAAACAGTGCCAAAACCTCCTTTTCCAATGATTGATTGGAAGTTGTTAGTTATGAGCTTCAGCTCTGCATATGTGAACCGTTTGATGTCGATATGTAATGGAGCTTCCTCTTCATAAATAGAATAATCTTCTTGTTCTGCTGATTTTCCTGCAAACTCCAACCTTTATTTACATGAAAGTACAGCTATTACTAATGTACACCAAACAAGCAATCATTAAACCACCCATTGCATTGATTCAAAAGGACTTCAGAGACTAATGTTTTATTTTACCTTTCCAGCACAGCCTCCAGAGGATACAAACCAGTACAAGGAGTAGGAGGGATACCACAGGAACTATCACTGCGATGAGCAAGATAGGTGTGCTGTTCTTATTTGCGCAGTACCTATCTTTGACTTTTGAGCATATGGGATTGCCTTCTAGTCTAATATGCCATTATACAAGTTATTAGTCAGATAAAAAACAAATAGAATCAGCTGAGGAAAGAAAAACTTAGCTATATCAACCTTTTCAAATCATGATTGTAACATGCTTCTGAATTTTAGTGCTTCTGAACAACCATTTCTCTAAAGGCAGAACTATTACATGCTTTATAAAGTGCATGCCTTCGCTAATAGATCTATTTTGTCCCTGTTTTGTTGGAAATCATGTAGATGCTAAAGCATTTATAATCACTAGAGTCTACTACGTGCAATTTACCTTTTTCAGTTGTTTTTCGATAATGTGGTCGTTGTTTATGAACCTTTAATTGATTGATACTGTTGTTCTGTGATAACCAGTGTTGGTTTTAGTCTTTTCCTTTTGGAGTAGTTATTTTGTTAGATTCTTTTTTTAATATCAATGAGGAGCCATGCAACTATGCAAGGGAGTGTTCCCAAACCTCAATTCAAGCTGTCCTGCCTTAAACCTTTGAAGAATAGAATCCGGGATTGGTCCATCAAGTTGGTTATTTGATAGGTTGCTGAAAAGAGTAGTTTAAATGATTCATCCATCTAAAATTCTATATCAACTAAAGATTAATTTGAAGCTTACAGCACTCTGAGTGAATTGAGTTGATAGTCTGGAATTGCGCCTGTCAAGTTGTTGTGCGATAAATCCCTATATATGTTTTTGTGTTCAGTGTCCACATAATTTCATTTAGCTCTGGATGCAATGTGGTAAGAAGAAGCACTTACAAGTTCTCCAGTGATGCCATTTTCATGAATGCTATGTGTAATCCACCTATTAATCCGCTGGCTGACAGATTACTGCGAATGAACACATCGTAATACTTGTCAGATAATTTAGTCATGGCATCTTAAGACAATAATACACATGACTAGGTATACATATAATGACTGTAATAGTACATTTAAAGGCAAATATATTTGGATCAGCATATATTGACTCCAAAGGTTAAAATCATGATGACATTATGAGGTTCGGATTTCAGAATAGATATGTACTTTACGGTTTTGTCATGTACTTACATTCGGGTGATCCTTGGATTTTTGTTTCCATTAGCGTAGTCGCAAGCCAGACCTTGCCAGGAATACTCTCTTGGGGAGCATGGATCTCCATTCCAGTTTCTTGTGTAACTGTAGTACTTCTTCACTTCTTTCATGTAATCAACTACAGCAACAGAAGGATAATTAAATCAAACATGAATGGAATAAAGGAATTGCTGCGTTTGTTGAACCTGTGGGCTTGCATGATTAGTTGATCAGTAAGTTGTAGACATTCACTTATTGAGTCGCTAGATAATTTTATGATTTAAATGTTATCTTTAACTTGTAATTATTCATTTCTCTACTTTTTCTTAAGAAAAAAATTCATTTATCTGTTTTTAGATTAAATTCATTTCTCTGCTAGTAGTCTTTGCTCTCAATAAAGCTAATGGATTCTTTTGTAGACCACATGCTGCCGTGCACGATGATCGTATGAACCTGCGCCATAAATAGCACACGTCTAATTTGTACCCCAATCTGTTACTGATCGTAATCGTACCGTCGTCTGGAGAAGTGGTGAGGTTGTCTGTATGAACAAGCGAGTACACCTCGAATGCGTTGATGAGCGGCTGGAGCTCCGAGCTGGGCGTCTTGCGCAGGGTGAAGTTGAGGCCCCTCTTGCGCAAGAACTTACCACTCTGATATGTGCTCTCCGCTCGGAACAGGGGTGGTATGTAGTTGGGAAACATCAGGTTTCCATCGTTATAGATATCAAACGTTCTATTCTGGTTGTTGCCTCCAATATCGGCAAAGTGGAAGATTGGTAGCAGCTCCAAGCTCCTGTAGTCGATGTTGTTGATGTTGTCGATGTTTTTCATGTTGTCCGGAAATATCACGCTGACGTTAAACTCTGAGAAATTGCTGCTTATGGTTGAGGCCTTCTGAAGGATGGGCATCGGCACCTGAAAGTCGTCATTTCCAGGAAGCTTTGTCACGTCTTGGTTGGTGGTCATGTTGAGGAAGGGAAATTTGTAGCGTAGGGCTGCCTCCCAGAAACGATCGAAGGGATCAGTTGGATATCTTGATCACCACAGGAGATACATGGAAATGATTGAAATTGTGAGGAAGACTATGATTACAACGTCAATGATTGAAACCGAAAAAAAAAACTTTTGAATCACCTCGTGATGTAATCATCGACCGAGCCATATCTTTGTCGAGCCAAATGGCTGATTGAAACAGAAAGATTCAGAAATGGGAACATTGCACCATCCAATTCCCTCAAGTCTAATGTAGATACGAAGGGAGTTCCTGATCCCAAGTTTATCAGACAGACGGATATGAATTTGTCTGGAGCAACTGTGATCACCTCTTTATACATCGTATCTGATGAACCCCAGTTTGTCAAGTTCACCGTTGCCCAGAAGTTGACGCCGATGTGGAGTCCAAAGAGAAACAGAGAACCCTTCTCTGACGAGTTGAGCCCATCGTAGTTTCCATAAGTGAAGGTGGCTCTGATGAGATACTTCTTGCTACTGTTGGTTGGTAATGTATAACAGTTCCGTTGGCCATCAGGGAAGCTTCTCAACGTTTTTTCTTGTTCATTTGTAGCATCTGCGATGTATTGTGCCAT
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| CDS seq | ATGGCACAATACATCGCAGATGCTACAAATGAACAAGAAAAAACGTTGAGAAGCTTCCCTGATGGCCAACGGAACTGTTATACATTACCAACCAACAGTAGCAAGAAGTATCTCATCAGAGCCACCTTCACTTATGGAAACTACGATGGGCTCAACTCGTCAGAGAAGGGTTCTCTGTTTCTCTTTGGACTCCACATCGGCGTCAACTTCTGGGCAACGGTGAACTTGACAAACTGGGGTTCATCAGATACGATGTATAAAGAGGTGATCACAGTTGCTCCAGACAAATTCATATCCGTCTGTCTGATAAACTTGGGATCAGGAACTCCCTTCGTATCTACATTAGACTTGAGGGAATTGGATGGTGCAATGTTCCCATTTCTGAATCTTTCTGTTTCAATCAGCCATTTGGCTCGACAAAGATATGGCTCGGTCGATGATTACATCACGAGATATCCAACTGATCCCTTCGATCGTTTCTGGGAGGCAGCCCTACGCTACAAATTTCCCTTCCTCAACATGACCACCAACCAAGACGTGACAAAGCTTCCTGGAAATGACGACTTTCAGGTGCCGATGCCCATCCTTCAGAAGGCCTCAACCATAAGCAGCAATTTCTCAGAGTTTAACGTCAGCGTGATATTTCCGGACAACATGAAAAACATCGACAACATCAACAACATCGACTACAGGAGCTTGGAGCTGCTACCAATCTTCCACTTTGCCGATATTGGAGGCAACAACCAGAATAGAACGTTTGATATCTATAACGATGGAAACCTGATGTTTCCCAACTACATACCACCCCTGTTCCGAGCGGAGAGCACATATCAGAGTGGTAAGTTCTTGCGCAAGAGGGGCCTCAACTTCACCCTGCGCAAGACGCCCAGCTCGGAGCTCCAGCCGCTCATCAACGCATTCGAGGTGTACTCGCTTGTTCATACAGACAACCTCACCACTTCTCCAGACGACGTTGATTACATGAAAGAAGTGAAGAAGTACTACAGTTACACAAGAAACTGGAATGGAGATCCATGCTCCCCAAGAGAGTATTCCTGGCAAGGTCTGGCTTGCGACTACGCTAATGGAAACAAAAATCCAAGGATCACCCGAATTAATCTGTCAGCCAGCGGATTAATAGGTGGATTACACATAGCATTCATGAAAATGGCATCACTGGAGAACTTCAACCTATCAAATAACCAACTTGATGGACCAATCCCGGATTCTATTCTTCAAAGGTTTAAGGCAGGACAGCTTGAATTGAGTGATAGTTCCTGTGGTATCCCTCCTACTCCTTGTACTGGTTTGTATCCTCTGGAGGCTGTGCTGGAAAGGTTGGAGTTTGCAGGAAAATCAGCAGAACAAGAAGATTATTCTATTTATGAAGAGGAAGCTCCATTACATATCGACATCAAACGGTTCACATATGCAGAGCTGAAGCTCATAACTAACAACTTCCAATCAATCATTGGAAAAGGAGGTTTTGGCACTGTTTATCATGGCATACTGGAAAATAACGATGAAGTAGCTGTTAAGGTGCTTGTGGAGACATCTATAGCAGAGTCAAAAGACTTCCTCCCTGAGGTATTTAACAGCACAAAAGTAGATCGAAGGCCATCTAAAGCAATTCCCATATAG
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| Protein seq | MAQYIADATNEQEKTLRSFPDGQRNCYTLPTNSSKKYLIRATFTYGNYDGLNSSEKGSLFLFGLHIGVNFWATVNLTNWGSSDTMYKEVITVAPDKFISVCLINLGSGTPFVSTLDLRELDGAMFPFLNLSVSISHLARQRYGSVDDYITRYPTDPFDRFWEAALRYKFPFLNMTTNQDVTKLPGNDDFQVPMPILQKASTISSNFSEFNVSVIFPDNMKNIDNINNIDYRSLELLPIFHFADIGGNNQNRTFDIYNDGNLMFPNYIPPLFRAESTYQSGKFLRKRGLNFTLRKTPSSELQPLINAFEVYSLVHTDNLTTSPDDVDYMKEVKKYYSYTRNWNGDPCSPREYSWQGLACDYANGNKNPRITRINLSASGLIGGLHIAFMKMASLENFNLSNNQLDGPIPDSILQRFKAGQLELSDSSCGIPPTPCTGLYPLEAVLERLEFAGKSAEQEDYSIYEEEAPLHIDIKRFTYAELKLITNNFQSIIGKGGFGTVYHGILENNDEVAVKVLVETSIAESKDFLPEVFNSTKVDRRPSKAIPI |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 [UniProtKB/Swiss-Prot:Q9ZQR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0811001 | OsNip_01t0811001-00 | Chr01 | 34461157 | 34464358 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCACAATACATCGCAGATGCTACAAATGAACAAGAAAAAACGTTGAGAAGCTTCCCTGATGGCCAACGGAACTGTTATACATTACCAACCAACAGTAGCAAGAAGTATCTCATCAGAGCCACCTTCACTTATGGAAACTACGATGGGCTCAACTCGTCAGAGAAGGGTTCTCTGTTTCTCTTTGGACTCCACATCGGCGTCAACTTCTGGGCAACGGTGAACTTGACAAACTGGGGTTCATCAGATACGATGTATAAAGAGGTGATCACAGTTGCTCCAGACAAATTCATATCCGTCTGTCTGATAAACTTGGGATCAGGAACTCCCTTCGTATCTACATTAGACTTGAGGGAATTGGATGGTGCAATGTTCCCATTTCTGAATCTTTCTGTTTCAATCAGCCATTTGGCTCGACAAAGATATGGCTCGGTCGATGATTACATCACGAGATATCCAACTGATCCCTTCGATCGTTTCTGGGAGGCAGCCCTACGCTACAAATTTCCCTTCCTCAACATGACCACCAACCAAGACGTGACAAAGCTTCCTGGAAATGACGACTTTCAGGTGCCGATGCCCATCCTTCAGAAGGCCTCAACCATAAGCAGCAATTTCTCAGAGTTTAACGTCAGCGTGATATTTCCGGACAACATGAAAAACATCGACAACATCAACAACATCGACTACAGGAGCTTGGAGCTGCTACCAATCTTCCACTTTGCCGATATTGGAGGCAACAACCAGAATAGAACGTTTGATATCTATAACGATGGAAACCTGATGTTTCCCAACTACATACCACCCCTGTTCCGAGCGGAGAGCACATATCAGAGTGGTAAGTTCTTGCGCAAGAGGGGCCTCAACTTCACCCTGCGCAAGACGCCCAGCTCGGAGCTCCAGCCGCTCATCAACGCATTCGAGGTGTACTCGCTTGTTCATACAGACAACCTCACCACTTCTCCAGACGACGTTGATTACATGAAAGAAGTGAAGAAGTACTACAGTTACACAAGAAACTGGAATGGAGATCCATGCTCCCCAAGAGAGTATTCCTGGCAAGGTCTGGCTTGCGACTACGCTAATGGAAACAAAAATCCAAGGATCACCCGAATTAATCTGTCAGCCAGCGGATTAATAGGTGGATTACACATAGCATTCATGAAAATGGCATCACTGGAGAACTTCAACCTATCAAATAACCAACTTGATGGACCAATCCCGGATTCTATTCTTCAAAGGTTTAAGGCAGGACAGCTTGAATTGAGTGATAGTTCCTGTGGTATCCCTCCTACTCCTTGTACTGGTTTGTATCCTCTGGAGGCTGTGCTGGAAAGGTTGGAGTTTGCAGGAAAATCAGCAGAACAAGAAGATTATTCTATTTATGAAGAGGAAGCTCCATTACATATCGACATCAAACGGTTCACATATGCAGAGCTGAAGCTCATAACTAACAACTTCCAATCAATCATTGGAAAAGGAGGTTTTGGCACTGTTTATCATGGCATACTGGAAAATAACGATGAAGTAGCTGTTAAGGTGCTTGTGGAGACATCTATAGCAGAGTCAAAAGACTTCCTCCCTGAGGTATTTAACAGCACAAAAGTAGATCGAAGGCCATCTAAAGCAATTCCCATATAG
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| Protein seq | MAQYIADATNEQEKTLRSFPDGQRNCYTLPTNSSKKYLIRATFTYGNYDGLNSSEKGSLFLFGLHIGVNFWATVNLTNWGSSDTMYKEVITVAPDKFISVCLINLGSGTPFVSTLDLRELDGAMFPFLNLSVSISHLARQRYGSVDDYITRYPTDPFDRFWEAALRYKFPFLNMTTNQDVTKLPGNDDFQVPMPILQKASTISSNFSEFNVSVIFPDNMKNIDNINNIDYRSLELLPIFHFADIGGNNQNRTFDIYNDGNLMFPNYIPPLFRAESTYQSGKFLRKRGLNFTLRKTPSSELQPLINAFEVYSLVHTDNLTTSPDDVDYMKEVKKYYSYTRNWNGDPCSPREYSWQGLACDYANGNKNPRITRINLSASGLIGGLHIAFMKMASLENFNLSNNQLDGPIPDSILQRFKAGQLELSDSSCGIPPTPCTGLYPLEAVLERLEFAGKSAEQEDYSIYEEEAPLHIDIKRFTYAELKLITNNFQSIIGKGGFGTVYHGILENNDEVAVKVLVETSIAESKDFLPEVFNSTKVDRRPSKAIPI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0481100 | SBH | 23.700064 | 28.238277 | 19.662548 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g59580 | RBH | 0.0 | 0.0 | 0.055898 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0811001 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0037580 | RBH | 0.0 | 0.000000 | 0.486313 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0037050 | RBH | 0.0 | 0.000000 | 0.168354 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0037460 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0036850 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0036560 | RBH | 0.0 | 2.403229 | 0.563428 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0569100 | SBH | 0.4095195 | 3.1655185 | 1.536893 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036250 | RBH | 0.000000 | 0.058991 | 0.154543 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0566400 | SBH | 0.0806975 | 1.7962985 | 1.4860645 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0036450 | RBH | 0.025067 | 0.034110 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0036510 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0036740 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0036740 | SBH | 0.006472 | 0.131972 | 0.249838 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0036530 | SBH | 0.0 | 3.000351 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G037090 | RBH | 0.0 | 0.387387 | 0.082232 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0036780 | RBH | 0.0 | 0.000000 | 0.000000 |
