Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0171000 | OGI:01013640 | 15/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:3667476-3673008 | ||||||||
| Gene Symbol | OsSERL5, OsBAK1-4, SERK1 | ||||||||||
| DNA seq | GCATGAAAAATGGAGCAGAGACTCTCCAATAGAAAACTTCTTTTTTTTTCTATATTTGCTCATCAATCTCATCTCTCTTTGCCACCTATAGATGTGCAACAAGGATGGGCTCACCTCACATAATGCTTACTGTATGTACAAATGAATACCACCTCGGCTATAGACAACAATATGGCTCTACTCAATTTGGAAAATTCTCATCCCCCTTAGTTGGGCGGCTCAAGAGCTCTAATCAAATCAAACACATTTGTCGCAAAGAACGAATATCGACACCGATCACCTCGGTCCAGAGAGCTCCATGGCTTCCAAGCCAAGGGAGGATTCGTCTGCCGCAAAATCCATGAATTTTGGGGGTAGAAGCTCTGACGAAACGGATTTCGGTGTGTCGACGTTCTGTGATGCCTCCCATTTCTCCGCGAGACCGTCCCCTTCCAGCATTCTGATCACCTCCGACATTCTGGGACGATGAGATGGGTAGTATTGTGTGCACAGCAAGGCCACCTGAACCATTTCCTCGAGCTCGACCCTGTCATAGTTGCTACCCAGGTCTTTATCCACCATCATGCTCAGCTGCTTTTCCTGATGAAGCTTCTTTACCTGGAACAAAAACTCAAGTTATCAGAAATGCTGCTCATGATAACCGCCTTTAAGAACAAATTATACCCTTTATCAGTCCTTTTAGATCTCAACTGGTTTGAAAAGAATATGCTAAATTATGGTGGATGTCCACACTAGATAAATAGAGATAGATATGCATCTAGTTTCTCAAGAACATTTTTTCAGCTTATCTGTTCTGCTAGGGAAAAGAAGCTCCACTATCTTGCACATCAAATCTTATCAATGCATGTACTCAACAAAAAAAAGGCAAAAAAGATCCTGAGAATGACATACAGACTTGTCAAAAAAAAGCTCTATGACGGACGAAACAAAAGGACATATCACAACAAACTGAGTGGACATATAAAGCATATTTATGGCCCTTGGGAGGCATTGAAGGAGAGATGTATCTGGTACTGTTAATAATGAGATATTACGAGGAACAAGGTATTTGGTGTACCAGAAATCAACATTAGAAGATATTTGTCTTTCAATACCTCCAAGGATGGGGAAAAAATTCAAAAGTAATTTAAGGAAAAAATTTCTCTGTTTCCAAAGAAAAAGTGAGTAAGCATATAGAGAACACAAAAAACATACCCAATCAAGCACTCCTCCTTTCTGATTCGCTAGCCTTCCAAAGTCCAATGCCTTCTGACCAGTGATCAACTCAACCAACAAAACTCCAAACCCAAAAACATCCGTCTTCTCCGATGACTGCCCAGTTGACAAATACTCTGGAGCTATGTGCCCTACTGTCCCACGTACTGCAGTGGTAACATGAGACTCCCTATGATCCAAAAGTTTCGCCAATCCGAAATCTCCCACAATTGCTTCGAAGTATTCATCAAGAAGCACATTGGAGGCTTTTACATCACGGTGAATTATTTTTGGATCACACTGTTCATGCAAATAAAGCAACCCTCGTGCTGTGCCTAGTGCTATCCTCTTTCTCCTTGACCAATCTAGAGCTGGCTTGCCATTTACAAGTTCTGAAAAAGATAGATAATGTTTAGATGCCATGTAGCATAAAACAGAGAAGGTTAATTTACTTGCAAGCTACTCAGATAATGTTCCATTACATCCGCTTTTATTGAATAGTAGTATAGCAATAAAATCAGTAGAACTAGACATGCCAATTGGATGGGCTTAGGATCAGTTCACATTCCATATATGGTACCAGTGCAATGTATTGGATGAACATATAAACACCTAAATCAATCAGAGGAGCAGGGATAGGGTTTTAAGTTAATTAACAAAACGAACTAATACCAGCGTAAGTAGCATACTTAGTGGCAAATTTGCTCGACAGTTATGACAGATGCGCACGAGAATTTTACATCTAAAAAATTATGGTTGAAGTTCATAATCATGTTTCTCCCTTGTGATAAACTCGTCTATCTTTTTCTTCAACTTTTTTTTTAAGGATTTGAGACTTAGGACAAGTTAGCGCCACAAATACATATATGTATACACATAAGATTTACAAGCATGGACTTACCCCGCAACTGAGAAGCAACACTTCCATTTGGCATATAAGGATAAACAAGTAATCTTTCGTTCTCTGTGGTGCAGAATCCAATGAGTCTAAGGAGATTCCGATGAACAGCCAAGCTTATGACTTCAACTTCAGTTTGGAACTGAACCTCCCCACCAACAGCATTATAGTCCTTCAATCTTTTGACAGCAACAATTGCACCATCACGTAGAAAACCTTTGTATACTATTCCATACCCGCCTTCACCTAAAATATTCTTTGAGTTGAAATTATTGGTAGCTGCTCGAAGCTCCTTAAAGGCATAACGCTTAAGATGACCCAAACATACTTCTGGGTCATATTGATCTGCAGATAAGGTATCAAGTATTACTGTACTGGAAACCGAAACAACAAAATATGTAATCTGGAAGAGCATGCGTAGAAACATAGAACATGTTAAAAGATCAGATTAAGCCCATAGGTGCAAAAGAAGACATGTCATGCTCTATCCATGGCAAATCAGCATACCGAAGGTAACGGGGACATCATGGTTCTGAACTGCACCAAAGGTTTTCCTAAAAGTACAAACACGCCTAATATAGGGGAATAAAGCTATCTCTCTTTACAGTTGGGCCCAAGAGTAAATTTAATACTTGTCCACTAAAAAAGCTTGGCCATTTATTTGTGTATGATGTTAAAGTAAAAAAGAAGACAAGCACCCATGCATTAACATGTGTAAAATCCCAGAGGCAACTCCACTAGGAATCTTTCAGCTAGTAAATTCAAGACATATGGCGTCTTTGTACAGAAGAGAATAATCAAGGTTCCCTTCATGACTAAGTAAGAAACTGAACATATTAGGGCATGGCCCAGGTCAAGGACTCATTTAAGTCATGTACTTCATAATCATCTAGTAATGTTGTCTTGGGCAGCTTGCATGATGTTAGGGACACTAGTGTGCAGCTTTATGAAACGAGCTGTTCATACAAATTCAGTTCTGTTGGGAGCATGGAATCTTGTCAGCAAAAACCCATATGATCACAGGTGCCTCTTTGTTATGGTCCACTAATCAACAGAATTTAAAACTTGCTACAGATATCACATAGTACATCACGGAAGATTAATGCAATGCTCAAATTTTGCAGCAGAAAGGGTCCTTCCTTTTTTAGAATATTATACAGTTTCAGTAGAGGTAATCATTCAGCTTGTGCAAAGATCAATAGGTTATTGAACCACTAACATTTCTACAACATGTTCAACCACATGGATGTCCCATGTAAATTTGCTATCAAATTGAACGCTGTGAAAAATACGCCTCAAAACTCAAGTAATGCAGAACATTCAGCCACTGTTGTAGTGAAGACATCAATTACTATCGAAATCTAGATAGAGTTACTACGGGAACAAAAGCGTGCAGAAATGAAAAGAGCATTACCATTTACATCAAAAAAGATCTGCTGATTGCGCCTATGCCGCCACCAAAGAAGCATACTGACTATGATAGTTGCAAATGCTACCGAACCAACAGTGACTCCACAGATAATAGCTATACGGTGGCTTCTTGCGATGCCTTGTTGTGGCTGAGCTGAGGAAGAGGAAACAAATATGAGTTGCACAAATAGATAAAACAATACAAAAGAGCTCAATGATGAACAAAATCTCACTCTTAAGATCATCTGGAGGGTATGAAAGTGGATCCATCGATACAGAAGAGCAATTATCTCCAGACTTGACACCACAGATCATTGGATTTCCCACAATGCTGTCAAATAAGTATAATACCAAAAATGCAAGGATAAGACAGTAGCCTACAGCATGCAAATAGAGCATTAAGTGAGAATTCAACTGTTCAAAGGGGTAGGGGATAAGATGAATTTACTTACTTGAAAGTTCTTGAAGAAATCTTTGGCAATGGACCGCTCAAATTATTGAATGAAAGATCTCTGCAACACAAGACCAATTCAAGGTAACTATTAAGCATACCAACGAATGATAAAGACAAGAATAACAAAATGATCAAATGATTTTTTTTAAAAAAAAAAGGATTAAGAGACATACACTAGAGCAAGGCCATTGATGGCGGCTAATGAATCAGGTAGAACTCCAGATAAGCTGTTGTTGTTCAACTTCCTGTAGCAACAAGAGGAACGGAAAATGACTCAAAATATATTGCAGCAGGCAGTGAGTGAGGACTCAAGAACCAAAGAAAGAAATCGTACAGATAGTTGAGGTTCTTGAGATCGCCAATTGAACTCGGGATACTCCCAGTAATCTGATTGTCTGACATGTCAAGCGTCTGCAGCATCCCCAACCTGCCTATGCTGGCAGGAATAGTGCCAGATATTGCATTGTTCTGTAATAGCCTGTAGAACAAGGAGGTTGAAACACTTGTAATACTTCTTGAAATGCCATAGGCAGCACAAACAAGGCCGGATCAGTCATCAGTGACAGCTTACACAGATTGCAGCCTGGTGAGGTTCCCAATTCCGGGGGATAATTTGCCTGACAAGCTTTGGCTGGGCAGACCTCTGCAAGCAAAGATGATACAACAAGATTAGCAGCCATGGCTGGTGCTCGCCGAAGGCGGCTGCGGAGGAATGAACAAATGGGCGGCTGAACGGACAGCGCGGAGACGTAGCCGTCGGCGGAGCAGGTGACCATCCTCCAGCTGCAGGGATCGACGGAGTTGATGTCCCAGTTGTCAAGCACGTTGTAGGGGTCTTGCAGCTCCGTCTTGATGGCCATCAGCGCCACCACTGCGAAGGAAACAAAGCTCAGCTCTCCACCAAATCTTAGCAACAAACAGCTCAAGCTTGGTAGCCACAGAAACAGCATTTGCGCTTTGTTCAAAGCCAGGAGGATTGTCGCTTTGCATGAGAGAGTCGCTTGCTTTGTGAATCGAGATTGCCCCCCAAAAAGAACCAAATCTTTATTATCAAAATTTCACTGGATCCTCTTTAATCCAAAAAGAACAGACTTCTTCTTTTTGAAATAAAGGCAACAAACAGATTGAACAGACATTATAAAATGAGAGCAGCGGCAGCATCGAAAAGCGTTGGATTTTTCTTGGGATTCTTAGATAGAGAAGGCAAGAAGCGTTACCTTCGTAGTTGATGCCGGCGGGAGAGAGCGTGGCGGTGGACGACGGCAGCAGGATCACGGCGAGCACGGCGGCGAGCGGCGCCGCCCACCACCGCATCCTCATCCCACAGATTCGCCCTCCTCTCTCCTCAACCAAAGAAACCCAACACAATTCCACCCCCACACCAGCAGAGCAGCTGCAGCTGCAGCAACACACAACTCCTCACCAAACCATCTCCCCACCTCACCAACCCAACCCAACCCAATCCAAGAACACAAACGACGACGAGATGACGAAGCGAGATGGTCACAGATACAGAGCAGAGCAAGCAGAGGCAGAGAGAAGTAGAGAGAGAGAGGGAAAGGGAAAGAAACGGCAGG
More
|
||||||||||
| CDS seq | ATGAGGATGCGGTGGTGGGCGGCGCCGCTCGCCGCCGTGCTCGCCGTGATCCTGCTGCCGTCGTCCACCGCCACGCTCTCTCCCGCCGGCATCAACTACGAAGTGGTGGCGCTGATGGCCATCAAGACGGAGCTGCAAGACCCCTACAACGTGCTTGACAACTGGGACATCAACTCCGTCGATCCCTGCAGCTGGAGGATGGTCACCTGCTCCGCCGACGGCTACGTCTCCGCGCTAGGTCTGCCCAGCCAAAGCTTGTCAGGCAAATTATCCCCCGGAATTGGGAACCTCACCAGGCTGCAATCTGTGCTATTACAGAACAATGCAATATCTGGCACTATTCCTGCCAGCATAGGCAGGTTGGGGATGCTGCAGACGCTTGACATGTCAGACAATCAGATTACTGGGAGTATCCCGAGTTCAATTGGCGATCTCAAGAACCTCAACTATCTGAAGTTGAACAACAACAGCTTATCTGGAGTTCTACCTGATTCATTAGCCGCCATCAATGGCCTTGCTCTAGTAGATCTTTCATTCAATAATTTGAGCGGTCCATTGCCAAAGATTTCTTCAAGAACTTTCAACATTGTGGGAAATCCAATGATCTGTGGTGTCAAGTCTGGAGATAATTGCTCTTCTGTATCGATGGATCCACTTTCATACCCTCCAGATGATCTTAAGACTCAGCCACAACAAGGCATCGCAAGAAGCCACCGTATAGCTATTATCTGTGGAGTCACTGTTGGTTCGGTAGCATTTGCAACTATCATAGTCAGTATGCTTCTTTGGTGGCGGCATAGGCGCAATCAGCAGATCTTTTTTGATGTAAATGATCAATATGACCCAGAAGTATGTTTGGGTCATCTTAAGCGTTATGCCTTTAAGGAGCTTCGAGCAGCTACCAATAATTTCAACTCAAAGAATATTTTAGGTGAAGGCGGGTATGGAATAGTATACAAAGGTTTTCTACGTGATGGTGCAATTGTTGCTGTCAAAAGATTGAAGGACTATAATGCTGTTGGTGGGGAGGTTCAGTTCCAAACTGAAGTTGAAGTCATAAGCTTGGCTGTTCATCGGAATCTCCTTAGACTCATTGGATTCTGCACCACAGAGAACGAAAGATTACTTGTTTATCCTTATATGCCAAATGGAAGTGTTGCTTCTCAGTTGCGGGAACTTGTAAATGGCAAGCCAGCTCTAGATTGGTCAAGGAGAAAGAGGATAGCACTAGGCACAGCACGAGGGTTGCTTTATTTGCATGAACAGTGTGATCCAAAAATAATTCACCGTGATGTAAAAGCCTCCAATGTGCTTCTTGATGAATACTTCGAAGCAATTGTGGGAGATTTCGGATTGGCGAAACTTTTGGATCATAGGGAGTCTCATGTTACCACTGCAGTACGTGGGACAGTAGGGCACATAGCTCCAGAGTATTTGTCAACTGGGCAGTCATCGGAGAAGACGGATGTTTTTGGGTTTGGAGTTTTGTTGGTTGAGTTGATCACTGGTCAGAAGGCATTGGACTTTGGAAGGCTAGCGAATCAGAAAGGAGGAGTGCTTGATTGGGTAAAGAAGCTTCATCAGGAAAAGCAGCTGAGCATGATGGTGGATAAAGACCTGGGTAGCAACTATGACAGGGTCGAGCTCGAGGAAATGGTTCAGGTGGCCTTGCTGTGCACACAATACTACCCATCTCATCGTCCCAGAATGTCGGAGGTGATCAGAATGCTGGAAGGGGACGGTCTCGCGGAGAAATGGGAGGCATCACAGAACGTCGACACACCGAAATCCGTTTCGTCAGAGCTTCTACCCCCAAAATTCATGGATTTTGCGGCAGACGAATCCTCCCTTGGCTTGGAAGCCATGGAGCTCTCTGGACCGAGGTGA
More
|
||||||||||
| Protein seq | MRMRWWAAPLAAVLAVILLPSSTATLSPAGINYEVVALMAIKTELQDPYNVLDNWDINSVDPCSWRMVTCSADGYVSALGLPSQSLSGKLSPGIGNLTRLQSVLLQNNAISGTIPASIGRLGMLQTLDMSDNQITGSIPSSIGDLKNLNYLKLNNNSLSGVLPDSLAAINGLALVDLSFNNLSGPLPKISSRTFNIVGNPMICGVKSGDNCSSVSMDPLSYPPDDLKTQPQQGIARSHRIAIICGVTVGSVAFATIIVSMLLWWRHRRNQQIFFDVNDQYDPEVCLGHLKRYAFKELRAATNNFNSKNILGEGGYGIVYKGFLRDGAIVAVKRLKDYNAVGGEVQFQTEVEVISLAVHRNLLRLIGFCTTENERLLVYPYMPNGSVASQLRELVNGKPALDWSRRKRIALGTARGLLYLHEQCDPKIIHRDVKASNVLLDEYFEAIVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLVELITGQKALDFGRLANQKGGVLDWVKKLHQEKQLSMMVDKDLGSNYDRVELEEMVQVALLCTQYYPSHRPRMSEVIRMLEGDGLAEKWEASQNVDTPKSVSSELLPPKFMDFAADESSLGLEAMELSGPR |
||||||||||
| Function | Protein NSP-INTERACTING KINASE 3 [UniProtKB/Swiss-Prot:Q93ZS4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0171000 | OsNip_01t0171000-01 | Chr01 | 3667476 | 3673008 | - | RAP2018-11-26 | ||
| CDS seq | ATGAGGATGCGGTGGTGGGCGGCGCCGCTCGCCGCCGTGCTCGCCGTGATCCTGCTGCCGTCGTCCACCGCCACGCTCTCTCCCGCCGGCATCAACTACGAAGTGGTGGCGCTGATGGCCATCAAGACGGAGCTGCAAGACCCCTACAACGTGCTTGACAACTGGGACATCAACTCCGTCGATCCCTGCAGCTGGAGGATGGTCACCTGCTCCGCCGACGGCTACGTCTCCGCGCTAGGTCTGCCCAGCCAAAGCTTGTCAGGCAAATTATCCCCCGGAATTGGGAACCTCACCAGGCTGCAATCTGTGCTATTACAGAACAATGCAATATCTGGCACTATTCCTGCCAGCATAGGCAGGTTGGGGATGCTGCAGACGCTTGACATGTCAGACAATCAGATTACTGGGAGTATCCCGAGTTCAATTGGCGATCTCAAGAACCTCAACTATCTGAAGTTGAACAACAACAGCTTATCTGGAGTTCTACCTGATTCATTAGCCGCCATCAATGGCCTTGCTCTAGTAGATCTTTCATTCAATAATTTGAGCGGTCCATTGCCAAAGATTTCTTCAAGAACTTTCAACATTGTGGGAAATCCAATGATCTGTGGTGTCAAGTCTGGAGATAATTGCTCTTCTGTATCGATGGATCCACTTTCATACCCTCCAGATGATCTTAAGACTCAGCCACAACAAGGCATCGCAAGAAGCCACCGTATAGCTATTATCTGTGGAGTCACTGTTGGTTCGGTAGCATTTGCAACTATCATAGTCAGTATGCTTCTTTGGTGGCGGCATAGGCGCAATCAGCAGATCTTTTTTGATGTAAATGATCAATATGACCCAGAAGTATGTTTGGGTCATCTTAAGCGTTATGCCTTTAAGGAGCTTCGAGCAGCTACCAATAATTTCAACTCAAAGAATATTTTAGGTGAAGGCGGGTATGGAATAGTATACAAAGGTTTTCTACGTGATGGTGCAATTGTTGCTGTCAAAAGATTGAAGGACTATAATGCTGTTGGTGGGGAGGTTCAGTTCCAAACTGAAGTTGAAGTCATAAGCTTGGCTGTTCATCGGAATCTCCTTAGACTCATTGGATTCTGCACCACAGAGAACGAAAGATTACTTGTTTATCCTTATATGCCAAATGGAAGTGTTGCTTCTCAGTTGCGGGAACTTGTAAATGGCAAGCCAGCTCTAGATTGGTCAAGGAGAAAGAGGATAGCACTAGGCACAGCACGAGGGTTGCTTTATTTGCATGAACAGTGTGATCCAAAAATAATTCACCGTGATGTAAAAGCCTCCAATGTGCTTCTTGATGAATACTTCGAAGCAATTGTGGGAGATTTCGGATTGGCGAAACTTTTGGATCATAGGGAGTCTCATGTTACCACTGCAGTACGTGGGACAGTAGGGCACATAGCTCCAGAGTATTTGTCAACTGGGCAGTCATCGGAGAAGACGGATGTTTTTGGGTTTGGAGTTTTGTTGGTTGAGTTGATCACTGGTCAGAAGGCATTGGACTTTGGAAGGCTAGCGAATCAGAAAGGAGGAGTGCTTGATTGGGTAAAGAAGCTTCATCAGGAAAAGCAGCTGAGCATGATGGTGGATAAAGACCTGGGTAGCAACTATGACAGGGTCGAGCTCGAGGAAATGGTTCAGGTGGCCTTGCTGTGCACACAATACTACCCATCTCATCGTCCCAGAATGTCGGAGGTGATCAGAATGCTGGAAGGGGACGGTCTCGCGGAGAAATGGGAGGCATCACAGAACGTCGACACACCGAAATCCGTTTCGTCAGAGCTTCTACCCCCAAAATTCATGGATTTTGCGGCAGACGAATCCTCCCTTGGCTTGGAAGCCATGGAGCTCTCTGGACCGAGGTGA
More
|
|||||||
| Protein seq | MRMRWWAAPLAAVLAVILLPSSTATLSPAGINYEVVALMAIKTELQDPYNVLDNWDINSVDPCSWRMVTCSADGYVSALGLPSQSLSGKLSPGIGNLTRLQSVLLQNNAISGTIPASIGRLGMLQTLDMSDNQITGSIPSSIGDLKNLNYLKLNNNSLSGVLPDSLAAINGLALVDLSFNNLSGPLPKISSRTFNIVGNPMICGVKSGDNCSSVSMDPLSYPPDDLKTQPQQGIARSHRIAIICGVTVGSVAFATIIVSMLLWWRHRRNQQIFFDVNDQYDPEVCLGHLKRYAFKELRAATNNFNSKNILGEGGYGIVYKGFLRDGAIVAVKRLKDYNAVGGEVQFQTEVEVISLAVHRNLLRLIGFCTTENERLLVYPYMPNGSVASQLRELVNGKPALDWSRRKRIALGTARGLLYLHEQCDPKIIHRDVKASNVLLDEYFEAIVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLVELITGQKALDFGRLANQKGGVLDWVKKLHQEKQLSMMVDKDLGSNYDRVELEEMVQVALLCTQYYPSHRPRMSEVIRMLEGDGLAEKWEASQNVDTPKSVSSELLPPKFMDFAADESSLGLEAMELSGPR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0171000 | OsNip_01t0171000-02 | Chr01 | 3667525 | 3672784 | - | RAP2018-11-26 | ||
| CDS seq | ATGAGGATGCGGTGGTGGGCGGCGCCGCTCGCCGCCGTGCTCGCCGTGATCCTGCTGCCGTCGTCCACCGCCACGCTCTCTCCCGCCGGCATCAACTACGAAGTGGTGGCGCTGATGGCCATCAAGACGGAGCTGCAAGACCCCTACAACGTGCTTGACAACTGGGACATCAACTCCGTCGATCCCTGCAGCTGGAGGATGGTCACCTGCTCCGCCGACGGCTACGTCTCCGCGCTAGGTCTGCCCAGCCAAAGCTTGTCAGGCAAATTATCCCCCGGAATTGGGAACCTCACCAGGCTGCAATCTGTGCTATTACAGAACAATGCAATATCTGGCACTATTCCTGCCAGCATAGGCAGGTTGGGGATGCTGCAGACGCTTGACATGTCAGACAATCAGATTACTGGGAGTATCCCGAGTTCAATTGGCGATCTCAAGAACCTCAACTATCTGAAGTTGAACAACAACAGCTTATCTGGAGTTCTACCTGATTCATTAGCCGCCATCAATGGCCTTGCTCTAGTAGATCTTTCATTCAATAATTTGAGCGGTCCATTGCCAAAGATTTCTTCAAGAACTTTCAACATTGTGGGAAATCCAATGATCTGTGGTGTCAAGTCTGGAGATAATTGCTCTTCTGTATCGATGGATCCACTTTCATACCCTCCAGATGATCTTAAGACTCAGCCACAACAAGGCATCGCAAGAAGCCACCGTATAGCTATTATCTGTGGAGTCACTGTTGGTTCGGTAGCATTTGCAACTATCATAGTCAGTATGCTTCTTTGGTGGCGGCATAGGCGCAATCAGCAGATCTTTTTTGATGTAAATGATCAATATGACCCAGAAGTATGTTTGGGTCATCTTAAGCGTTATGCCTTTAAGGAGCTTCGAGCAGCTACCAATAATTTCAACTCAAAGAATATTTTAGGTGAAGGCGGGTATGGAATAGTATACAAAGGTTTTCTACGTGATGGTGCAATTGTTGCTGTCAAAAGATTGAAGGACTATAATGCTGTTGGTGGGGAGGTTCAGTTCCAAACTGAAGTTGAAGTCATAAGCTTGGCTGTTCATCGGAATCTCCTTAGACTCATTGGATTCTGCACCACAGAGAACGAAAGATTACTTGTTTATCCTTATATGCCAAATGGAAGTGTTGCTTCTCAGTTGCGGGAACTTGTAAATGGCAAGCCAGCTCTAGATTGGTCAAGGAGAAGACGGATGTTTTTGGGTTTGGAGTTTTGTTGGTTGAGTTGA
More
|
|||||||
| Protein seq | MRMRWWAAPLAAVLAVILLPSSTATLSPAGINYEVVALMAIKTELQDPYNVLDNWDINSVDPCSWRMVTCSADGYVSALGLPSQSLSGKLSPGIGNLTRLQSVLLQNNAISGTIPASIGRLGMLQTLDMSDNQITGSIPSSIGDLKNLNYLKLNNNSLSGVLPDSLAAINGLALVDLSFNNLSGPLPKISSRTFNIVGNPMICGVKSGDNCSSVSMDPLSYPPDDLKTQPQQGIARSHRIAIICGVTVGSVAFATIIVSMLLWWRHRRNQQIFFDVNDQYDPEVCLGHLKRYAFKELRAATNNFNSKNILGEGGYGIVYKGFLRDGAIVAVKRLKDYNAVGGEVQFQTEVEVISLAVHRNLLRLIGFCTTENERLLVYPYMPNGSVASQLRELVNGKPALDWSRRRRMFLGLEFCWLS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr01 | 3668670 | 3669061 | - | OsNip_01t0171000-01 | OsNip_01t0171000-02,OsNip_01t0171000-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.029543 | 0.750263 | 5.844368 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0170300 | SBH | 0.074437 | 0.074055 | 1.276557 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g07630 | RBH | 0.670198 | 0.485747 | 1.448202 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0171000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0005180 | RBH | 0.198709 | 22.471918 | 13.860655 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0004880 | RBH | 0.292064 | 16.526175 | 4.680020 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0005140 | RBH | 0.259160 | 10.244317 | 14.904477 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0004780 | RBH | 0.092812 | 0.537383 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0005000 | RBH | 1.802634 | 31.688904 | 19.091120 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0065100 | RBH | 0.1107725 | 0.186216 | 0.3339905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0004950 | RBH | 0.090218 | 1.026027 | 1.698518 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0065600 | RBH | 7.3264795 | 1.345549 | 41.529524 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0004760 | RBH | 0.120920 | 0.263994 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0004950 | RBH | 0.225211 | 9.656888 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0005000 | RBH | 0.000000 | 14.542777 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0004950 | RBH | 0.331919 | 0.904323 | 1.754206 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0004940 | RBH | 0.223466 | 8.565285 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G004990 | RBH | 0.000000 | 5.184141 | 6.102294 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0004880 | RBH | 0.185572 | 6.174233 | 6.629394 |
