Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_01g0138400 OGI:01002250 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr01:2053583-2057636
Gene Symbol -
DNA seq

ACCAACCGTCGTCGCGATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGGTAAGTGTAAATCTATCTGTTCTTTGTGCTAAATTCGTTCAGTTTTTTTCCCTGAATTTGATTATTGGGAAATACATAACTATTACTCAAATTAAATTAGTTAGAGACTTGAGAGTATTAAAATTCAAATTAACTATTTATTGATTGATCAGCACAAGCAGTAGTTAGGATCAACGAACATGTAGTAGTAGTTCGTATTTGCGTGGTCGTGCCAAAAACCAGGGTGGTTAGAACTGACAAAAGGAAGTAAGTAGATTAAGCTATTTTGACTTTTGAACGTGATTTATATGGAGGGTAACAATCTAACAATGGTTGTCAATCGGTGACCGTTCACGTTATCCAAAATTCTTTAAAATTTCCTAATGATGCTCCCTTTTTCTGATGAGCAATTTTATGGTTCTTGAAGAGGTACCATGAGGTACCGAAAATTTAGTGTAAAATTTGGCACCTCATAGTATCTAGGTACCAAGAGGTACTAAATTTACAATACAAAAAGTGGTACCTCATGGTACCTTCTCAAGGACCGTAAAATTGCTCTTTTTTAATAAGAAAAAAAAGTGTAGATTGTGATTCTGGAACTGAAAAAAAGGTGATCTCTTTATGCATGTTTTAATTAGGTGAAGTGTACTTTCAGGACAAGGCTCTTGATAGGACTAGCAATAGTGGAAGTACAATAGAACTGGAATGACTTTTTGCACGGGCTTGGACTAATTAAATTACTGAATCAACATATGGTGGCTGTCACGATCTCATCGTATGAAACAATCTTTTGCCGAGAACCAATAATGGACTCCACATAAGCCCCAGTGTGATCTGTGAAGCTATACTTTAGCTACAAGTAGCCGGAATTTCACGTTCTCCGATCTCAGCAACGTTTACATGTAGAATACGTATACAGCCAGCACGTGTGGTTGGTTAGTTGTTAGTGCTTACTTATCGACTTTGACTTTGAAATCACAATGATAGGAGCAAAATGGTCAACTAAAACTAACTTTTGTGTCCGAAAAGAGACGATTTTGTTTGATTTCATCTGATTATTTTGATCATTTTGTTCATCATGTCTGAATCAAACGAGATATGTTGCTGCTCGCGGCGGCTGTTGCTGCACTCTCCTGTAGCTGGTTAGGTCAGATACATGTTGGTCTCTGTCCACTGTACAAATACTTCGAATAAAGCAACGTCGTACATATGTACAAATTTACGATGATATCTGTTGTCTGAATTGTTCCTAAGTAATAGTTCAGACACCTTAATTGGTCCAACCAGTTTCAATTAGTCATCAGGAAATCAATGACGCAACTGTGTGTGGAACAATTAGTCTTTGATCAGGAACTGTTTCTTTGATTAATCTCGGAAATAAATTAATGCTCGTTCAATGTATTTCAATTGGTTGGAATAGACTGGCGATATTTTGTACATATGTTGACTAAAATGAAATGATTCTTCCCTTTCAGATGCAAAGAAGTCCGGGAACAAGGTCATCCTGATAGGTATGCATCCGCTTCAGTCTTCAATTCTTGCTTAACTAATCCAACAAAATAATATAATTCAACTTGTTTTTATTCTTCGTATATGTCATGATGATCAATTGTTTCTTCAATAATGATGTCATGATCAATTATCTAGATAAATTTACCACTTGGTAGTAATTACTAATCTATACTAATTGTTTGCTTCGTCGCTTTCAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGGTCAGTGTCGTGTTGATCAGTTGCTGATCACTCTGTTTTTTTTTTTTCTGATAACGCTGAATTCCATATGATCAATCGCTGACGAAGATCGATATGCGTTTTTGTCGAGCAGATCAAGGTTATCAACACCGGGAAGCACAGCGTGAAAAGTGGCGATGGAATGACTATACTTGAAGCAGACAACTGGCTAGTAGACTGTAAATTAAAGAAAACCAGAGTGGGAGCTTTGGTTTTGTATGTAGAGCAGATTAGCAAGAACAACAAAATTAGACGTTATTACTGTTTGAATCATTAATTCGTTCTCTTATGGTTTTCTGTGGAAATCATGTACTACTCCTATTCAGTTTTAGTTTAACTTGTGCTTGACG

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CDS seq

ATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGATGCAAAGAAGTCCGGGAACAAGGTCATCCTGATAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGATCAAGGTTATCAACACCGGGAAGCACAGCGTGA

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Protein seq

MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPPPSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVANDNVQTDASGCPVPKIDVSASLTLAPFTASPANSQLVFLFNCTSSSRPPPAGFVNVTCPGAKAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPDRDVLGWKVLQEIAVGVARGLEYLHDGCNTRIIHFDIKPHNVLLDEGFRPKIADFGMAKLCNPKESILSMADTRGTIGFIAPEVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRSRLSTPGSTA

Function LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [UniProtKB/Swiss-Prot:Q9FF31]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_01g0138400 OsNip_01t0138400-01 Chr01 2053583 2057636 + RAP2018-11-26
CDS seq

ATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGATGCAAAGAAGTCCGGGAACAAGGTCATCCTGATAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGATCAAGGTTATCAACACCGGGAAGCACAGCGTGA

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Protein seq

MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPPPSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVANDNVQTDASGCPVPKIDVSASLTLAPFTASPANSQLVFLFNCTSSSRPPPAGFVNVTCPGAKAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPDRDVLGWKVLQEIAVGVARGLEYLHDGCNTRIIHFDIKPHNVLLDEGFRPKIADFGMAKLCNPKESILSMADTRGTIGFIAPEVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRSRLSTPGSTA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.425040 0.000000 0.260576

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0137500 SBH 0.0 0.144809 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g04580 RBH 0.287183 0.000000 0.067019
Nipponbare | IRGSP 1.0 | RAP-db Os01g0138400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0002670 RBH 0.000000 0.657511 0.237838
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0002590 SBH 0.0 2.082065 0.070285
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0002650 SBH 1.453925 0.0 1.284384
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0002560 SBH 0.0 0.029560 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0002650 SBH 0.000000 4.420455 0.969946
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0036100 RBH 0.1061185 2.9181005 0.0222755
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0002590 SBH 0.0 0.0 0.032247
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0036400 RBH 0.2848285 11.694443 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0002480 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0002640 SBH 0.000000 1.410245 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0002680 SBH 0.522387 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0002710 SBH 0.0 0.000000 0.056105
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0002600 RBH 0.0 0.185763 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G002780 SBH 0.000000 0.221656 0.311188
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0002620 RBH 0.0 8.370481 0.393676
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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