Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0002620 | OGI:01002250 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:2036057-2039868 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggacacgccattgCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGTCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGTGACAACGGCAGCCGCGCGTCGCTCGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCTCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCAGCCTCGCGCCGTTCACGGCCAGCCCGGCCAACAACCAGCTCGTCTTCCTCTTCAACTGCAGGGCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGGGCGCAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGGTAAGTGTAAATCTATCTGTTCTTTGTGCTAAATTCGTTCAGTTTTTTTCCCTGAATTTGATTATTGGGAAATACATAACTATTACTCAAATTAAaattagttagagacttgagagtattaaaattcaaattaactatttattgattgatcagcacaagcagtagttaggatcaacgaacatgtagtagtagttcgtatttgcgtggtcgtgccaaaaaccaaggtggttagaactgacagaaagatttagctagtttgacttttgaacgtgatttatttggagggtaacaagctaacaatggttgtcatttgtcaatcggtgaccgttcacggtatctaaaattctttaaaaattcataatgatgctccctttttctgataacgAaaaaaaaagtgtagattgtgattctggaactgaaaaaaggtgatctctttatgcatgttttaattaggtgaagtgtactttcaggacaaggctcttgataggactagcaatagtggaagtacaatagaactggaatgactttttgcacgggcttggactaattaaattactgaatcaacatatggtggctgtcacgatctcatcgtatgaaacaatcttttgccgagaaccaataatggactccacataagccccagtgtgatctgtgaagctatactttagctacaagtagccggaatttcacgttctccgatctcaacaacgtttacatgtagaatacgtatacagccagcacgtgtggttggttagttgttagtgcttacttatcgactttgactttgaaatcacaatgataggagcaaaatggtcaactaaaactaactttTGtgtccgaaaagagacgattttgtttgatttcatctgattattttgatcattttgttcatcatgtctgaatcaaacgagatatgttgctgctcgcggcggctgttgctgcactctcctgtagctggttaggtcagatacatgttggtctctgtccactgtacaaatacttcgaataaagcaacgtcgtacatatgtacaaatatacgatgatatctgttgtctgaattgttcctaagtaatagttcagacaccttaattggtccaaccagtttcaattagtcatcaggaaatcaatgacgcaactgtgtgtggaacaattagtctttgatcaggaactgtttctttgattaatctcggaaataaattaatgctcgttcaatgtatttcaattggttcgaatagactggcgatattttgtacatatgttgactaaaatgaaatgattcttccctttcagatgcaaagaagtccgggaacaaggtcatcctgataggtatgcatccgcttcagtcttcaattcttgcttaactagtccaacaaaataatataattcaacttgtttttattcttcgtatatgtcatgatgatcaattgtttcttcaataatgatgtcatgatcaattatctagataaatttaccacttggtagtaattactaatctatactaattgtttgcttcgtcgctttcagtgtcactgtcgatctgtgcgactgggttggtgctattggcatgcatcgccatcgtctacaagtgtcgccgacgtatgcaaaatcgtttcagttttctgaacgccatggacggtgcaagcagaacggatactgcaaaggtggagaagctgctgcagagttacggatccctagctccccggaggttcaggtactcggagctgaagaagataacgaagtccttcagccagcggctcggcgagggcggctacggcacggtgttcagcggcacgctcgccgacggccgcgccgtcgccgtcaagttcctccaccactccaagcccaacggcgaggagttcctcaacgaggtggtcagcattggccggacgagccatgtcaacatcgtctccctgctcggcttctgcctcgagggctccaagcgagccctcgtctacgagtacatgcccaatggctcgctggacaagtacatctactcgacgtcggcggcggcggcggcggaggcggaggaggcggaggcgacggcgagccctgacagggatgttcTggggtggaaggtgctgcaggagatcgccgtcggcgtggcgcgggggctggagtacctgcacgacgggtgcaacacgcggatcatccacttcgacatcaagccgcacaacgtgctcctcgacgagggattccggcccaagatcgccgacttcgggatggcgaagctgtgcaacccaaaggagagcatcctgtcgatggcggacacgagggggacgatagggttcatcgcgccggaggtgttctcccgcgggttcggcgacatctcgaccaagtccgacgtgtacagctacgggatgctgctgctggagatggtcggcggcgggagcaacgtcaaggcctacgccgagaagggcgccagcggcacgttcttcccgctctgggtctacgaccacctgctcgaggacggcggcgtgctgcagagcgtcgccgccgccgccgccgccacggccggcggcggcgccggatcaccgggaggcgaggagatcgcgaggaagatggcgctgatcgggctgtggtgcatacagaccgtgccggcgaacaggccgtcgatgggcaaggtgctggagatgctggagagaagcgtccacgagctcgccatgccgccgcggccgtaccactcgaactcgtcgtccccgtcgcggccgtcgagctacccctcctctgcctcggatttcacgcagcggtcagtgtcgtgttgatcagttgctgatcactctgTtttttttttctgataacgctgaattccatatgatcaatcgctgacgaagatcggtatgcgTttttgtcgagcagatcaaggttatcaacaccgggaagcacagcgtgaaaagtggcgatggaatgactatacttgaagcagacaactggctagtagactgtaaattaaagaaaaccagagtgggagctttggTtttgtatgtagagcagattagcaagaacaacaaaattagacgttattactgtttgaatcattaattcgttctcttatggttttctgtggaaa
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| CDS seq | atggacacgccattgCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGTCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGTGACAACGGCAGCCGCGCGTCGCTCGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCTCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCAGCCTCGCGCCGTTCACGGCCAGCCCGGCCAACAACCAGCTCGTCTTCCTCTTCAACTGCAGGGCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGGGCGCAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGatgcaaagaagtccgggaacaaggtcatcctgatagtgtcactgtcgatctgtgcgactgggttggtgctattggcatgcatcgccatcgtctacaagtgtcgccgacgtatgcaaaatcgtttcagttttctgaacgccatggacggtgcaagcagaacggatactgcaaaggtggagaagctgctgcagagttacggatccctagctccccggaggttcaggtactcggagctgaagaagataacgaagtccttcagccagcggctcggcgagggcggctacggcacggtgttcagcggcacgctcgccgacggccgcgccgtcgccgtcaagttcctccaccactccaagcccaacggcgaggagttcctcaacgaggtggtcagcattggccggacgagccatgtcaacatcgtctccctgctcggcttctgcctcgagggctccaagcgagccctcgtctacgagtacatgcccaatggctcgctggacaagtacatctactcgacgtcggcggcggcggcggcggaggcggaggaggcggaggcgacggcgagccctgacagggatgtgttctcccgcgggttcggcgacatctcgaccaagtccgacgtgtacagctacgggatgctgctgctggagatggtcggcggcgggagcaacgtcaaggcctacgccgagaagggcgccagcggcacgttcttcccgctctgggtctacgaccacctgctcgaggacggcggcgtgctgcagagcgtcgccgccgccgccgccgccacggccggcggcggcgccggatcaccgggaggcgaggagatcgcgaggaagatggcgctgatcgggctgtggtgcatacagaccgtgccggcgaacaggccgtcgatgggcaaggtgctggagatgctggagagaagcgtccacgagctcgccatgccgccgcggccgtaccactcgaactcgtcgtccccgtcgcggccgtcgagctacccctcctctgcctcggatttcacgcagcgatcaaggttatcaacaccgggaagcacagcgtga
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| Protein seq | MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPSSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVSNDNVQTDASGCPVPKIDVSASLSLAPFTASPANNQLVFLFNCRAPPAGFVNVTCPGAQAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPDRDVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRSRLSTPGSTA |
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| Function | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 [UniProtKB/Swiss-Prot:F4KA51] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0002620 | OsNaBo_01g0002620.01 | Chr01 | 2036057 | 2039868 | + | NAM | ||
| CDS seq | atggacacgccattgCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGTCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGTGACAACGGCAGCCGCGCGTCGCTCGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCTCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCAGCCTCGCGCCGTTCACGGCCAGCCCGGCCAACAACCAGCTCGTCTTCCTCTTCAACTGCAGGGCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGGGCGCAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGatgcaaagaagtccgggaacaaggtcatcctgatagtgtcactgtcgatctgtgcgactgggttggtgctattggcatgcatcgccatcgtctacaagtgtcgccgacgtatgcaaaatcgtttcagttttctgaacgccatggacggtgcaagcagaacggatactgcaaaggtggagaagctgctgcagagttacggatccctagctccccggaggttcaggtactcggagctgaagaagataacgaagtccttcagccagcggctcggcgagggcggctacggcacggtgttcagcggcacgctcgccgacggccgcgccgtcgccgtcaagttcctccaccactccaagcccaacggcgaggagttcctcaacgaggtggtcagcattggccggacgagccatgtcaacatcgtctccctgctcggcttctgcctcgagggctccaagcgagccctcgtctacgagtacatgcccaatggctcgctggacaagtacatctactcgacgtcggcggcggcggcggcggaggcggaggaggcggaggcgacggcgagccctgacagggatgtgttctcccgcgggttcggcgacatctcgaccaagtccgacgtgtacagctacgggatgctgctgctggagatggtcggcggcgggagcaacgtcaaggcctacgccgagaagggcgccagcggcacgttcttcccgctctgggtctacgaccacctgctcgaggacggcggcgtgctgcagagcgtcgccgccgccgccgccgccacggccggcggcggcgccggatcaccgggaggcgaggagatcgcgaggaagatggcgctgatcgggctgtggtgcatacagaccgtgccggcgaacaggccgtcgatgggcaaggtgctggagatgctggagagaagcgtccacgagctcgccatgccgccgcggccgtaccactcgaactcgtcgtccccgtcgcggccgtcgagctacccctcctctgcctcggatttcacgcagcgatcaaggttatcaacaccgggaagcacagcgtga
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| Protein seq | MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPSSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVSNDNVQTDASGCPVPKIDVSASLSLAPFTASPANNQLVFLFNCRAPPAGFVNVTCPGAQAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPDRDVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRSRLSTPGSTA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 8.370481 | 0.393676 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0138400 | RBH | 0.425040 | 0.000000 | 0.260576 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g04580 | RBH | 0.287183 | 0.000000 | 0.067019 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0138400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0002670 | RBH | 0.000000 | 0.657511 | 0.237838 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0002590 | RBH | 0.0 | 2.082065 | 0.070285 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0002680 | SBH | 0.053964 | 0.0 | 0.464416 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0002560 | SBH | 0.0 | 0.029560 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0002650 | SBH | 0.000000 | 4.420455 | 0.969946 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0036100 | RBH | 0.1061185 | 2.9181005 | 0.0222755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0002590 | SBH | 0.0 | 0.0 | 0.032247 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0036400 | RBH | 0.2848285 | 11.694443 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0002480 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0002640 | SBH | 0.000000 | 1.410245 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0002680 | SBH | 0.522387 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002710 | RBH | 0.0 | 0.000000 | 0.056105 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0002600 | SBH | 0.0 | 0.185763 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G002780 | RBH | 0.000000 | 0.221656 | 0.311188 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
