Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_12g0021380 OGI:12070340 | 13/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr12:25475337-25479236
Gene Symbol -
DNA seq

gtggtttggtttaagtggatttgcagcagccagacagataaatgagAaaaaaaaaaaagatgaacagaaggtctccactatgtacagaccaccacagtgatttggttctgcccaaagaaccagctgggcacaaaagaagatgtgaagctgcacttgtccagctacactcctacacggttcatcatcatgtatctacaaaatttgttgcttgtcactgcaatcatgagtagtagcaaccattataggaggtactcactcagagttccaggtgctgctcgtagtagagctcactcatgcagggagacaggatctcctcctccagcatcttcaggacagcgctcatcgatggacgctggcctgggtctgcatcggtgcacatcgcagcaatgtcgaggatcgcctcgactgcttccacttccacatcgccgcagttctcatcaatgatctcctccagccgatgctcccccgtcagggtgttgagctgcagaagaaagttggcaattcagattacttttgtcacttgtaagattcataggagggagggaatatagagaggttcttcttacccagccaacaatgttcagtcccttcttgaggaagcatgcatctgtaggcctctttccggtcaccaactcgagcaaaagcactccaaagctatacacatcagatttttcagtagcatggccattttgcaggtattctgtccatataaagttaaaaatgaccaatgtcagtctggatggaaggtgctcaacacagatttaaacaggcagcattggtgttgtcttaaaaaagcatgatttgtctcgatttatctccagtagcttgactacaaagtagtacaaactactacgaatctggatttagtactaggtggtgtctaattgaatattaggttactatattttaggacggagaaagtgcttaacagtcataagcttctactgttagtctgtactctgtacaatacaaaagggggagcagtaattatgcaggacagcatgatcttttgttttgattgaaagcatcacagtgtggaatagagaataagtacctggtgctaggtatccaaaagtacccgcgacaacagtggtaacgtgggcatcattatctacaagcagccttgcaaggccaaaatctgatacgcggggttccaagcttctgtccagaaggatgttactggctttgatgtccctgtgcacaatcacgggtgagcaatcgtggtgcaaatacgccagccctcgagcagagcccagggcaatcttcatacgtgcattccagttcaatggttgatcatcctgagcatctcctgaaatcagggacaaggcgtttttgagcatcaggtaatgtaagaagtttttgcacaattgaagcagttgtaaccatgatgatgaaacaatatgcagcaagatgcaagaaagacaataggcttaccatgaaggtagcaatccaaactgcccagctccaagaaatcatatatgagtagtttggctgtaggaagacggcagtatcctcgcagattgacaaggttaatgtgcctaatgctgcccagaatctcaagctccttctcgaaggtcctatcgcgcccttcacggttgagatcaatcctcttgacagcaaatgccgtgccatcatccatcaccatcttgtacacggtaccaaaaccgccacaaccgaccacatcctcttcatcaagcagctccaaccttctgatgatctcacctgatgagtacggaaggttccactggtatgtcacgagcttcgcacctaagtcagaacaccacagatagcaattagtttccattaagtgagggcctggacaggccggaacgagtgatagcagctgtgtcgactttattaccatctgggatagtttgcttgtccattttaacatagcttccaccaatgctcttcttcctggacagaagacatatccagaggaagcctagtaccgcgatcaatgcaagagccatggttgacattgagccaatcacaatgccattcaggaagtgcgatgttttgttgttgttgattggtgaaacgcctgtttgcgacagagagatgacaccatcagttagtcacacacacattgcaccaaatttggtgagaagagcttcaacactgagaagatggcttagaaatggaagacttgccagctgaggagaggggatcagaatgcggcaacacggcaggaaacccgagggttccacggcaagccttctggatgggcagtccacaaagctccaaattcccaacgaacctgcaaatgccattgaattgtcatgtgaagaaatgcaccatggcattgaatacaggttgtgctcaagaagtagcagaaatgcacaaatttgttcatgtttgctacagttatgctcccacatcataaagagcaatgacacatcaaagaaagtagaaaggaagatgggcccaaatctaaaagcttacgagctgcttttgaaggttccaaggacaccaacatttgggatttctccagaaaagaaattggtggacagattcctgcaatacaaataagcatatgttctttcagagatttgcaacagcatttactcgtctggttttagcaatgccgacaagatggcataaggaaatttatacagcaagaaacttacaggaaacgaaggtgagtaaggcttccaatggacgccggtattgtgcccctcaacaggttgctggacaagtccctgcagatggcacgcattagaccaagaataagcagtgaatcagatcagggtattttgctaagaacctacaagattgtgaggtgaatgagctcgccaatctctgaagggatgcctccttgtaggtagttggctctcaagtaactgcacacacacacagagtaaattagacctccgcatttcagctctacaaagtcattagcagacagatggagatggaaccaaacaagtactagatcgtagcagcatacatacatcgctctgagctcggtgcagttcttgatctcagaagggattgggccatgcaagctgttctggtgcaatgctctgaacaaaaggggttagaaattaaagaaagaccaatgcggatagtgtaaatgaagatggtgttgaaatgggaagtgttgcacaaaagtggtgaagaagaaaaaatgttacattctctgcagcttgtcgagcttcccaatgctaggtgaaatgatgcccccaagctgcatgtaagggagatttctggtagaaaaggaaaacatgaaagaagagattattcagggggcgaggaatccaatgagcacatgggtagccgagccatgaaacattttgcttgagacttgagagagagatgcaaaagggaaaagaaaaatgaaagataaggctaattaatctgggtgcaaaatggagaaatgcaaggaaggaaagatagagataaattggagacggacatggattggaccctgaggtcggggaaggagcaggagatgccctcccagccgcaggggttagggtcggtgggcttccaggtcgtcagccgctggctgctgccattgaaggagagcttgagctccagcaatgcctgccctgcaaggagcagaaaaaacacaactaccccggtgagacagccagattggaggaagcattctctcatccatccatccatccatccatggatgcgtagtgcagcgcagagagagagagggtaccgtccggggtgagggccatggaggtggagcagagcagtgaggcagccatggcggtgacgagggcggcgcacaggcccaccacctgccccggagtcccatggcggccgccgctcgtcggctccatcttcttcatcttgttgcttgtgctgtccatggtggccttggcttggtctctctctctctctctctctcttgagtgtagtgggagtgagtgagagtgaggg

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CDS seq

atggacagcacaagcaacaagatgaagaagatggagccgacgagcggcggccgccatgggactccggggcaggtggtgggcctgtgcgccgccctcgtcaccgccatggctgcctcactgctctgctccacctccatggccctcaccccggacgggcaggcattgctggagctcaagctctccttcaatggcagcagccagcggctgacgacctggaagcccaccgaccctaacccctgcggctgggagggcatctcctgctccttccccgacctcagggtccaatccataaatctcccttacatgcagcttgggggcatcatttcacctagcattgggaagctcgacaagctgcagagaatagcattgcaccagaacagcttgcatggcccaatcccttctgagatcaagaactgcaccgagctcagagcgatttacttgagagccaactacctacaaggaggcatcccttcagagattggcgagctcattcacctcacaatcttggacttgtccagcaacctgttgaggggcacaataccggcgtccattggaagccttactcaccttcgtttcctgaatctgtccaccaatttcttttctggagaaatcccaaatgttggtgtccttggaaccttcaaaagcagctcgttcgttgggaatttggagctttgtggactgcccatccagaaggcttgccgtggaaccctcgggtttcctgccgtgttgccgcattctgatcccctctcctcagctggcaagtcttccatttctaagccatcttctcagtgcgtttcaccaatcaacaacaacaaaacatcgcacttcctgaatggcattgtgattggctcaatgtcaaccatggctcttgcattgatcgcggtactaggcttcctctggatatgtcttctgtccaggaagaagagcattggtggaagctatgttaaaatggacaagcaaactatcccagatggtgcgaagctcgtgacataccagtggaaccttccgtactcatcaggtgagatcatcagaaggttggagctgcttgatgaagaggatgtggtcggttgtggcggttttggtaccgtgtacaagatggtgatggatgatggcacggcatttgctgtcaagaggattgatctcaaccgtgaagggcgcgataggaccttcgagaaggagcttgagattctgggcagcattaggcacattaaccttgtcaatctgcgaggatactgccgtcttcctacagccaaactactcatatatgatttcttggagctgggcagtttggattgctaccttcatggagatgctcaggatgatcaaccattgaactggaatgcacgtatgaagattgccctgggctctgctcgagggctggcgtatttgcaccacgattgctcacccgtgattgtgcacagggacatcaaagccagtaacatccttctggacagaagcttggaaccccgcgtatcagattttggccttgcaaggctgcttgtagataatgatgcccacgttaccactgttgtcgcgggtacttttggatacctagcaccagaatacctgcaaaatggccatgctactgaaaaatctgatgtgtatagctttggagtgcttttgctcgagttggtgaccggaaagaggcctacagatgcatgcttcctcaagaagggactgaacattgttggctggctcaacaccctgacgggggagcatcggctggaggagatcattgatgagaactgcggcgatgtggaagtggaagcagtcgaggcgatcctcgacattgctgcgatgtgcaccgatgcagacccaggccagcgtccatcgatgagcgctgtcctgaagatgctggaggaggagatcctgtctccctgcatgagtgagctctactacgagcagcacctggaactctga

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Protein seq

MDSTSNKMKKMEPTSGGRHGTPGQVVGLCAALVTAMAASLLCSTSMALTPDGQALLELKLSFNGSSQRLTTWKPTDPNPCGWEGISCSFPDLRVQSINLPYMQLGGIISPSIGKLDKLQRIALHQNSLHGPIPSEIKNCTELRAIYLRANYLQGGIPSEIGELIHLTILDLSSNLLRGTIPASIGSLTHLRFLNLSTNFFSGEIPNVGVLGTFKSSSFVGNLELCGLPIQKACRGTLGFPAVLPHSDPLSSAGKSSISKPSSQCVSPINNNKTSHFLNGIVIGSMSTMALALIAVLGFLWICLLSRKKSIGGSYVKMDKQTIPDGAKLVTYQWNLPYSSGEIIRRLELLDEEDVVGCGGFGTVYKMVMDDGTAFAVKRIDLNREGRDRTFEKELEILGSIRHINLVNLRGYCRLPTAKLLIYDFLELGSLDCYLHGDAQDDQPLNWNARMKIALGSARGLAYLHHDCSPVIVHRDIKASNILLDRSLEPRVSDFGLARLLVDNDAHVTTVVAGTFGYLAPEYLQNGHATEKSDVYSFGVLLLELVTGKRPTDACFLKKGLNIVGWLNTLTGEHRLEEIIDENCGDVEVEAVEAILDIAAMCTDADPGQRPSMSAVLKMLEEEILSPCMSELYYEQHLEL

Function LRR receptor-like serine/threonine-protein kinase FEI 1 [UniProtKB/Swiss-Prot:C0LGF4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0021380 OsNaBo_12g0021380.03 Chr12 25477452 25479214 - NAM
CDS seq

atggacagcacaagcaacaagatgaagaagatggagccgacgagcggcggccgccatgggactccggggcaggtggtgggcctgtgcgccgccctcgtcaccgccatggctgcctcactgctctgctccacctccatggccctcaccccggacgggcaggcattgctggagctcaagctctccttcaatggcagcagccagcggctgacgacctggaagcccaccgaccctaacccctgcggctgggagggcatctcctgctccttccccgacctcagggtccaatccataaatctcccttacatgcagcttgggggcatcatttcacctagcattgggaagctcgacaagctgcagagaatagcattgcaccagaacagcttgcatggcccaatcccttctgagatcaagaactgcaccgagctcagagcgatttacttgagagccaactacctacaaggaggcatcccttcagagattggcgagctcattcacctcacaatcttggacttgtccagcaacctgttgaggggcacaataccggcgtccattggaagccttactcaccttcgtttcctgaatctgtccaccaatttcttttctggagaaatcccaaatgttggtgtccttggaaccttcaaaagcagctcgttcgttgggaatttggagctttgtggactgcccatccagaaggcttgccgtggaaccctcgggtttcctgccgtgttgccgcattctgatcccctctcctcagctggcaagtcttccatttctaagccatcttctcagtgttga

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Protein seq

MDSTSNKMKKMEPTSGGRHGTPGQVVGLCAALVTAMAASLLCSTSMALTPDGQALLELKLSFNGSSQRLTTWKPTDPNPCGWEGISCSFPDLRVQSINLPYMQLGGIISPSIGKLDKLQRIALHQNSLHGPIPSEIKNCTELRAIYLRANYLQGGIPSEIGELIHLTILDLSSNLLRGTIPASIGSLTHLRFLNLSTNFFSGEIPNVGVLGTFKSSSFVGNLELCGLPIQKACRGTLGFPAVLPHSDPLSSAGKSSISKPSSQC

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0021380 OsNaBo_12g0021380.01 Chr12 25475339 25479236 - NAM
CDS seq

atggacagcacaagcaacaagatgaagaagatggagccgacgagcggcggccgccatgggactccggggcaggtggtgggcctgtgcgccgccctcgtcaccgccatggctgcctcactgctctgctccacctccatggccctcaccccggacgggcaggcattgctggagctcaagctctccttcaatggcagcagccagcggctgacgacctggaagcccaccgaccctaacccctgcggctgggagggcatctcctgctccttccccgacctcagggtccaatccataaatctcccttacatgcagcttgggggcatcatttcacctagcattgggaagctcgacaagctgcagagaatagcattgcaccagaacagcttgcatggcccaatcccttctgagatcaagaactgcaccgagctcagagcgatttacttgagagccaactacctacaaggaggcatcccttcagagattggcgagctcattcacctcacaatcttggacttgtccagcaacctgttgaggggcacaataccggcgtccattggaagccttactcaccttcgtttcctgaatctgtccaccaatttcttttctggagaaatcccaaatgttggtgtccttggaaccttcaaaagcagctcgttcgttgggaatttggagctttgtggactgcccatccagaaggcttgccgtggaaccctcgggtttcctgccgtgttgccgcattctgatcccctctcctcagctggcgtttcaccaatcaacaacaacaaaacatcgcacttcctgaatggcattgtgattggctcaatgtcaaccatggctcttgcattgatcgcggtactaggcttcctctggatatgtcttctgtccaggaagaagagcattggtggaagctatgttaaaatggacaagcaaactatcccagatggtgcgaagctcgtgacataccagtggaaccttccgtactcatcaggtgagatcatcagaaggttggagctgcttgatgaagaggatgtggtcggttgtggcggttttggtaccgtgtacaagatggtgatggatgatggcacggcatttgctgtcaagaggattgatctcaaccgtgaagggcgcgataggaccttcgagaaggagcttgagattctgggcagcattaggcacattaaccttgtcaatctgcgaggatactgccgtcttcctacagccaaactactcatatatgatttcttggagctgggcagtttggattgctaccttcatggagatgctcaggatgatcaaccattgaactggaatgcacgtatgaagattgccctgggctctgctcgagggctggcgtatttgcaccacgattgctcacccgtgattgtgcacagggacatcaaagccagtaacatccttctggacagaagcttggaaccccgcgtatcagattttggccttgcaaggctgcttgtagataatgatgcccacgttaccactgttgtcgcgggtacttttggatacctagcaccagaatacctgcaaaatggccatgctactgaaaaatctgatgtgtatagctttggagtgcttttgctcgagttggtgaccggaaagaggcctacagatgcatgcttcctcaagaagggactgaacattgttggctggctcaacaccctgacgggggagcatcggctggaggagatcattgatgagaactgcggcgatgtggaagtggaagcagtcgaggcgatcctcgacattgctgcgatgtgcaccgatgcagacccaggccagcgtccatcgatgagcgctgtcctgaagatgctggaggaggagatcctgtctccctgcatgagtgagctctactacgagcagcacctggaactctga

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Protein seq

MDSTSNKMKKMEPTSGGRHGTPGQVVGLCAALVTAMAASLLCSTSMALTPDGQALLELKLSFNGSSQRLTTWKPTDPNPCGWEGISCSFPDLRVQSINLPYMQLGGIISPSIGKLDKLQRIALHQNSLHGPIPSEIKNCTELRAIYLRANYLQGGIPSEIGELIHLTILDLSSNLLRGTIPASIGSLTHLRFLNLSTNFFSGEIPNVGVLGTFKSSSFVGNLELCGLPIQKACRGTLGFPAVLPHSDPLSSAGVSPINNNKTSHFLNGIVIGSMSTMALALIAVLGFLWICLLSRKKSIGGSYVKMDKQTIPDGAKLVTYQWNLPYSSGEIIRRLELLDEEDVVGCGGFGTVYKMVMDDGTAFAVKRIDLNREGRDRTFEKELEILGSIRHINLVNLRGYCRLPTAKLLIYDFLELGSLDCYLHGDAQDDQPLNWNARMKIALGSARGLAYLHHDCSPVIVHRDIKASNILLDRSLEPRVSDFGLARLLVDNDAHVTTVVAGTFGYLAPEYLQNGHATEKSDVYSFGVLLLELVTGKRPTDACFLKKGLNIVGWLNTLTGEHRLEEIIDENCGDVEVEAVEAILDIAAMCTDADPGQRPSMSAVLKMLEEEILSPCMSELYYEQHLEL

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0021380 OsNaBo_12g0021380.02 Chr12 25475337 25479214 - NAM
CDS seq

atggacagcacaagcaacaagatgaagaagatggagccgacgagcggcggccgccatgggactccggggcaggtggtgggcctgtgcgccgccctcgtcaccgccatggctgcctcactgctctgctccacctccatggccctcaccccggacgggcaggcattgctggagctcaagctctccttcaatggcagcagccagcggctgacgacctggaagcccaccgaccctaacccctgcggctgggagggcatctcctgctccttccccgacctcagggtccaatccataaatctcccttacatgcagcttgggggcatcatttcacctagcattgggaagctcgacaagctgcagagaatagcattgcaccagaacagcttgcatggcccaatcccttctgagatcaagaactgcaccgagctcagagcgatttacttgagagccaactacctacaaggaggcatcccttcagagattggcgagctcattcacctcacaatcttggacttgtccagcaacctgttgaggggcacaataccggcgtccattggaagccttactcaccttcgtttcctgaatctgtccaccaatttcttttctggagaaatcccaaatgttggtgtccttggaaccttcaaaagcagctcgttcgttgggaatttggagctttgtggactgcccatccagaaggcttgccgtggaaccctcgggtttcctgccgtgttgccgcattctgatcccctctcctcagctggcaagtcttccatttctaagccatcttctcagtgcgtttcaccaatcaacaacaacaaaacatcgcacttcctgaatggcattgtgattggctcaatgtcaaccatggctcttgcattgatcgcggtactaggcttcctctggatatgtcttctgtccaggaagaagagcattggtggaagctatgttaaaatggacaagcaaactatcccagatggtgcgaagctcgtgacataccagtggaaccttccgtactcatcaggtgagatcatcagaaggttggagctgcttgatgaagaggatgtggtcggttgtggcggttttggtaccgtgtacaagatggtgatggatgatggcacggcatttgctgtcaagaggattgatctcaaccgtgaagggcgcgataggaccttcgagaaggagcttgagattctgggcagcattaggcacattaaccttgtcaatctgcgaggatactgccgtcttcctacagccaaactactcatatatgatttcttggagctgggcagtttggattgctaccttcatggagatgctcaggatgatcaaccattgaactggaatgcacgtatgaagattgccctgggctctgctcgagggctggcgtatttgcaccacgattgctcacccgtgattgtgcacagggacatcaaagccagtaacatccttctggacagaagcttggaaccccgcgtatcagattttggccttgcaaggctgcttgtagataatgatgcccacgttaccactgttgtcgcgggtacttttggatacctagcaccagaatacctgcaaaatggccatgctactgaaaaatctgatgtgtatagctttggagtgcttttgctcgagttggtgaccggaaagaggcctacagatgcatgcttcctcaagaagggactgaacattgttggctggctcaacaccctgacgggggagcatcggctggaggagatcattgatgagaactgcggcgatgtggaagtggaagcagtcgaggcgatcctcgacattgctgcgatgtgcaccgatgcagacccaggccagcgtccatcgatgagcgctgtcctgaagatgctggaggaggagatcctgtctccctgcatgagtgagctctactacgagcagcacctggaactctga

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Protein seq

MDSTSNKMKKMEPTSGGRHGTPGQVVGLCAALVTAMAASLLCSTSMALTPDGQALLELKLSFNGSSQRLTTWKPTDPNPCGWEGISCSFPDLRVQSINLPYMQLGGIISPSIGKLDKLQRIALHQNSLHGPIPSEIKNCTELRAIYLRANYLQGGIPSEIGELIHLTILDLSSNLLRGTIPASIGSLTHLRFLNLSTNFFSGEIPNVGVLGTFKSSSFVGNLELCGLPIQKACRGTLGFPAVLPHSDPLSSAGKSSISKPSSQCVSPINNNKTSHFLNGIVIGSMSTMALALIAVLGFLWICLLSRKKSIGGSYVKMDKQTIPDGAKLVTYQWNLPYSSGEIIRRLELLDEEDVVGCGGFGTVYKMVMDDGTAFAVKRIDLNREGRDRTFEKELEILGSIRHINLVNLRGYCRLPTAKLLIYDFLELGSLDCYLHGDAQDDQPLNWNARMKIALGSARGLAYLHHDCSPVIVHRDIKASNILLDRSLEPRVSDFGLARLLVDNDAHVTTVVAGTFGYLAPEYLQNGHATEKSDVYSFGVLLLELVTGKRPTDACFLKKGLNIVGWLNTLTGEHRLEEIIDENCGDVEVEAVEAILDIAAMCTDADPGQRPSMSAVLKMLEEEILSPCMSELYYEQHLEL

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0021380 OsNaBo_12g0021380.04 Chr12 25475339 25477456 - NAM
CDS seq

atgtcaaccatggctcttgcattgatcgcggtactaggcttcctctggatatgtcttctgtccaggaagaagagcattggtggaagctatgttaaaatggacaagcaaactatcccagatggtgcgaagctcgtgacataccagtggaaccttccgtactcatcaggtgagatcatcagaaggttggagctgcttgatgaagaggatgtggtcggttgtggcggttttggtaccgtgtacaagatggtgatggatgatggcacggcatttgctgtcaagaggattgatctcaaccgtgaagggcgcgataggaccttcgagaaggagcttgagattctgggcagcattaggcacattaaccttgtcaatctgcgaggatactgccgtcttcctacagccaaactactcatatatgatttcttggagctgggcagtttggattgctaccttcatggagatgctcaggatgatcaaccattgaactggaatgcacgtatgaagattgccctgggctctgctcgagggctggcgtatttgcaccacgattgctcacccgtgattgtgcacagggacatcaaagccagtaacatccttctggacagaagcttggaaccccgcgtatcagattttggccttgcaaggctgcttgtagataatgatgcccacgttaccactgttgtcgcgggtacttttggatacctagcaccagaatacctgcaaaatggccatgctactgaaaaatctgatgtgtatagctttggagtgcttttgctcgagttggtgaccggaaagaggcctacagatgcatgcttcctcaagaagggactgaacattgttggctggctcaacaccctgacgggggagcatcggctggaggagatcattgatgagaactgcggcgatgtggaagtggaagcagtcgaggcgatcctcgacattgctgcgatgtgcaccgatgcagacccaggccagcgtccatcgatgagcgctgtcctgaagatgctggaggaggagatcctgtctccctgcatgagtgagctctactacgagcagcacctggaactctga

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Protein seq

MSTMALALIAVLGFLWICLLSRKKSIGGSYVKMDKQTIPDGAKLVTYQWNLPYSSGEIIRRLELLDEEDVVGCGGFGTVYKMVMDDGTAFAVKRIDLNREGRDRTFEKELEILGSIRHINLVNLRGYCRLPTAKLLIYDFLELGSLDCYLHGDAQDDQPLNWNARMKIALGSARGLAYLHHDCSPVIVHRDIKASNILLDRSLEPRVSDFGLARLLVDNDAHVTTVVAGTFGYLAPEYLQNGHATEKSDVYSFGVLLLELVTGKRPTDACFLKKGLNIVGWLNTLTGEHRLEEIIDENCGDVEVEAVEAILDIAAMCTDADPGQRPSMSAVLKMLEEEILSPCMSELYYEQHLEL

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OsNaBo_12g0021380.04OsNaBo_12g0021380.03OsNaBo_12g0021380.02OsNaBo_12g0021380.01AS25475237 bp25476000 bp25477000 bp25478000 bp25479000 bp25480000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr12 25477380 25477490 - OsNaBo_12g0021380.02 OsNaBo_12g0021380.01,OsNaBo_12g0021380.02 All

Expression

Leaf Root Panicle
FPKM 0.427381 1.777446 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0638100 RBH 0.0 0.000000 1.090984
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g44090 RBH 0.0 0.000000 0.275794
Nipponbare | IRGSP 1.0 | RAP-db Os12g0638100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0022230 RBH 0.0 3.862473 1.774118
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0022310 RBH 0.0 3.777688 0.287683
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0022670 RBH 0.0 1.704822 2.384135
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0021650 RBH 1.892599 1.572451 0.884907
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0368500 RBH 4.26095 1.2300105 6.636201
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0401000 RBH 7.30737 0.0998225 25.9764165
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0021770 RBH 0.000000 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0022020 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0021870 RBH 0.000000 5.472236 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0021990 RBH 0.0 0.0 0.313667
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G021670 RBH 0.0 2.780389 1.944661
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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