Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_12g0019180 | OGI:12065920 | 14/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr12:23638372-23653500 | ||||||||
| Gene Symbol | OsCROC-1, CROC-1, CROC1, OsCROC1, OsUEV1B, UEV1B | ||||||||||
| DNA seq | tagctgaagcctgaagatcatatgaatttattgttgctggctgcaatatagcctgtgccaagttaggactagatacatcggttcagaactcttgaaaactagatatatctacagtacaccacatgcttgacaggttttatgcggatgaaaaattttcatggtatctctacacaaggctcttcatcttacgcttcagccacatggttcgaatatctacagtcagtgaaagaaaaatctCccgattgcttggatccaagaagacgtccggtgcgagcgacttctcgattggcgagaggtctgccatggcgttcatcacctcgatgcaccgcggaatgctgtacctatcaacatggttttccagctgtttattgtctctctgaaacttggggtcagcatgtccttccataacatcggatgttccatcctcactgggcctcctcaagtagtgccatgcctctcctcgcacttcctcagtaggcctcctagtgagctgccatgattccggccgcacttgggtaagcggTtttgggtatagatgcccattcatagtctggacttcgacgccaactaaagtctcctgttggaatgaagactctctggatactggagatggggagacaggcgagagtggtcggttcatataataatcatcttcttcatcgtcacttgagtcagcttctgttccattcctttcatttggtgttggtccagcaagaatatttttaccatccaaaataacaccaactgcagaatatgagcaATatttaaattttagcaacagattgcaattcatacccaaaaaaaaaaatcaaagacttcctccgtcagggcaagccataaatgtcatcattggagaataattgcaacaggacatatttgaacttaatgtgcagcataaaacatgctattctggaggccccggtttaatgaagacataattccaaagtgtactgacctatacaataacttcaatttgtatttgttgaggtatattgttccttaagaacaatgtacataaaaaccaaagcataatgctgcttctatcagattattctttagtatagccacaatttactactacctccatcacttaatgtatgacgtcggttagttcaaaattgaaaaaaaaaaatcagagggagtactatttactttggtgtagtaaagtctaaattactgcattgattgctgtgcagtttgtcgttattaaatattccttgtattttgtatagaatttcacaggactggtggtgacaaaatacaacaagcatatttatcggttcatactttcatgtgcatttaacaattgcagatacatattgacaagatcataagtccagaactccctatgtctgtgtgtgccagcctgccaggttcctccacagcattaggtgtatatgttagatatgataaggttctataatgtattttgtgattgtgggccaaccaaacagtttatcttgatgatgaaacagaaggcaccttgttctaccatgatgatcaagttagttttccctacaatgagatggccacggaatgaaaagctccaagttctaccatgatggttaaactgagacaaacagaatttgcctgacaggAaaaggaaccaggtcgtgcatgtaatcaaaaacagcacaattttctaccttaactactgcagccaacagaactccctcttttgttactctctaataagccctactgggtttggaccatagcaacaggtagacagtcctatctgtgcagaTtttgtaactttagcaataaaaaataaaatacaaactagtgttatctctttgagccatatattgaaaaaaaaacatttctgggagcattagaagcctaaatctcctgattagaaggatcctgggatagctgctacttgtagccgcaagcaaacggttgtaaaaatctgctatttgaaacaagatcaaccaaaatctccaactcctatagctggtgcaaatcaccttcccagttatgaaacttatgtggtatatatccaattaattctacttcaaacaattgtatctactaaatcggattggcaacacattgtattaccttttctcccatatgggttcttgcaatcatcacatttacagttgatggagcatcctgctcctcccttcaaacacagaagaaaaacatatccatggtcatgagtggacaaaagatgagaaactaacaggatagagctagatatgaaacctggtagcagtcacagtatttcttaaggcagcctgactttttgcaagtgcattttcttctaccaaagtccataggggatcttataagttgttcctagagagatcataccaggaacagtgaaaccaggaacacaaaataatccaaaataataagattctgtttaagaaaaatgtataccactgaatcttgaccagtctctaatgtttgaacagctttcaaaggcaaggctggtgtactccgtggaacaccatgaatagaTttTGTTGTAACATGGATCACATCCACATGATTCAGAACAATGTGATCCAGATGCAAAACACACACAATAACTGCCACAGCATAAATCAAGTGTCAGTTACAAACAGAAAGAAATGATTACTTAGCAGTAATAAACATAAAGCATGGTGTTGCACACAAGCTCTTGGCTGGCTGGAGTGCTGGACAGGGTTTGTGTCTAGGCCTGCAGGAGGTGGGATGGGGGTTTATGCAGGTGTGCTCAAACCATATCAGGATTTCCATCCTCTTTACATGCATCTCCATGCATAAAAATCCCCCCCCCCCCCTCCCCAAAACTCAGAGTGAGGTGACAAATTACATTAATGGCACTAATGTGCAGATTATCAGGAAAAACAAAATTAGCCAGTTCCTCTGAGTTGTGGTTTAAGGCCCAAACTTTACAGCAAAATATAATAACAGAAACAAAAGGAGAGTAAATTTTATACCCAAAAAAAGGACCACCCTTCATAAACTATAAAGTACCTAACAACTCATTGACATGTTGTTAGTGCTACAGAATTTTTACTCTCAAGCAGGACTCAAACTAAAAGTAATCGGTCCTTCGCCAACATACGTTTCAAAAGCGTGATCATCGAAGCTAGAATTACATGAAAACTATCACAGGATTCTTTAACGATGGCAAACTATATCACCACCCGGTGAAAAAATGATACTCCAAGAGCATCCTAGAGATAGATGATACGAACAAACAAAGAGGAGCTGGACATGATAAACCCTCAATTttTCTCCACCCTCTATCGTGTTATGGTAAGATCATGAGCCAATTCTACCATTAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAAGAGGAAAAATCTTACAGCTTAAGGCACTTGGATTTCTTGCAGCTGCACGACTTGCACCCTTCCCCTTCATCCGTCTTCCTCCTAAACATATAAAAAAATTAAACAGCAAAAACGAGTTAGCAGCACGCAACGTACCAAAAACAGGAAATCGAAGACCAAAAAACGAACGCCACCGACTTCTTCTTCTTCTCCGAGTTGCCGTTCGCCTCCACCACCGCCGCGATCGCCGCCGGCGGCACGGCGAAGGCGGCTTCCGCGGAGGCGTTCTCGGCGGGGGCGAGGAGGGCGGGGGCGGGTGCTGGTGGTGGTGGTGGTGGTGGCGGGGGAGGGGGAGGGGCGACGACGACGACGCGGTCGCGGAGGAGGGGGTCGTCGGGGTCCGATCCGGACGCCTCGAGCTGCGGCGGGGGTGGGGGCGGGGGCTTCGCGGGATCCTCCGCGGCCGACATCGGATCGGGCGACGCCTCCTCCCGCCCGATCGGCGGTGGCGGCGGCGGCGGCGAGGGGTTCGCCGTGGCGGCGAGGGGGGAGAGAGAGAGGCGGAGGCGAGGGGGAGGAGGAGGGCACGAGGCGATGCGGGATTGGAGGAGAGGCGATGCGGGGGGTGGATCGGACGGCGGGGAGCGGCTTTGAGATTCGGGTCTGGCTACGATGGATGATGGGGAATTTATTTATTTTTTTTCGCTCTCTCTCTATCTCCCAAATCGTATAAATTCCGTCCTTTAACTTCAATTCGCGAATTTTAAATTGGGGGTTGAGGATTATTGTTACGAAGATGATATTTATAGCCCTATCGTTTGGCTTATTTGACGAGGAATAATCCCAACGATATGTTTGCAAACGGaaaaaatataatttgtgaataaaatttttatatacgtatttttaacgatctaaaagtaaatgctgaaaataaactacaatgaaaaaactctaaagtcaactctaaattgaaaatttaaattttactgataagtataaacatacatgaaaagataaagctggtatatattctccgtAaaaaaaacaacttctaatctatgtctgtcaaaagttggttgttTCttccacgaagtatgtagtgaaattagttaagagttcgttttattcttattgcaatgggattttgttattatgttaaattatggggtttagattgcgttacttattttggatgatataattaaatgccgtctttgaattgaactctcgcccatgtatttacgaaatttaaattagaaggggtatgaatgaagatgatatgtttaggtggaaatagattaggagtttgctttattcgggttgcgattgcgacgggatttgtttttttttttaaattacggttttagattgcgttcacgaatagtataagtactattttgatgatatatgctttgtaaattTGtttaagagttcgttttattcgtattgccatgcgatttgttatttgaaattatcttttcggatcgcgttctttaatatcatatttgttgtcctgttgacaatcacaactctaatcaatcttattatggtacagcatagcatgagataatgaattactctatttccagttattagagcgattcgcaattgaaaactttgtgatttaaaatttagtacaattttatcaccacagatgtgagatcaggttaatgcaacatggtaatctgaagacaaaacaaacaacaaatttagacttgcaatgccacaaaaagaaccagcatagtaccacttcagaaacatagccaaatctgcagagcatcactagattcattacaaagattttaccccaattcgttagttttgtctcttgaggtaatgccgtactggcaaactgttaaccaaacaagcgagacacgacacaaacacaggacgtacacggaccacgtacaaggtagtaccagcgaagttcagctacaatcatttgcaccaaatgttcagacggctcaaatctcatgcgatatatagaaagagaattacaatggttcatccatggcatgcggagatgagtggcgggcgcctgcttctagaagaatgtcccctctggaggctgcactagtttccggttgtgtgatgccgccatctctttcttaagttgggtcaagatagcctccattgtgtactcgcggcgccaatttgacaacaggctgaacttcctttggtcaacctacattagctccaaaagataagttttaattaatcaaataattgaaCacaagagttagaaataattctgaaccaaatttctcgtgtcataccaatccattctctgggtttacacaggtcatgttgattcttgagtgaaaTtttacagttggtggcctgtctgggtagtccttatcgcagaaaagcttcagttggtatatccggccctcatggacagtctatcaaaaattcaaatgttcgaaaccAaatatatatcaacaagaaagcgtcgagctcagaacgcaacagttacatatgAagattatgagtacaagagtaagcaatggaaacaaacaacttacgttatggggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattccatagcttactgatccatcaccgatgcccttctcccctctctcgagctcttctagcagtctgaagttcctaggcactgagataacatttatactagttaataacacagcttgcttcacagagcattaaaaacacagaaccaggatacgattctcctcctggttacatcaagaaggtaccaagggcaagtattttgccAaatatccattcaaaaacttatcttggcaaatacaagcatcatgaacttgttttaaaatgtaagttccaaacccactaatttggattcaaaccatgaggatttatgtaacgagatgaaatggggtccaagtgcccaactgattgcagtaagtgctaagtaatagacaatcaTttatgaacggggaaaagacaaccgctaacaaactattttacgctctgaccacataagcacAaaaactgaatgaaggcttagaagggAaaaatgtccagcccaaGcattcgactctagcaatagtcctggaCtcctggtaaactacaagtgatagcttccaccaccagtttggggctttaggcaaagctagtctgtcaaacgaaaacatcgtgtatggagaaggcgagaagcccaatactgcattctaccaatccacaagtaataactgacaactaatgctacctttctgaaagatccaacatttcctgctccatgataagattacaagtacatttagctgctactactatcattttaaccgtcAttcattcaaatagcacacctcgaatcctcgatgcaataatcgaacagggacaaatagcatatgcctctagtgcaccatatcatgaggaaaaccacgaaaaacgtctatagtttccccttccctgatatatcaagggagatttcgcaatcgtcctgaatattaattaaTcggtacgcagtgtgtgcgaaccagaacacatagcagccaaatcgatctgctccgatgatggatccacggcaggtgacagcagcgagcgaattgggacCccccccccccccccccccaaaaaaaaaaaaaaaatcgatccaatcaatcaatcaatcaatccatccatccatagaGgaaacggaggttccggggtaggctccgcgctcgcgctagagggagaggaggagatcggggggcgcgggtcaaaggaagcggatccaggagaagctagggcttaccgacgactgccgatggatctccactcgacgCcatcccagctgagcgcaggcgccggcttcgcgacgacaaccagaggccgcagcggcggattggcgggacagcgggcgatctccggcggcggcggcggaggaggggttcgcttccgttcccctttggtggtggTgtgtgagtgcgcggagacggagccaaccaaagaagaGgggggaagacgagccgatccccagagccgcgacgatacgagccgagctgggaggaggcaagtggtcaagagggcgtgcggaggtgggctgggTtgggccgaggcccgtacggctccaagcccggtaggagtttttgcagcaggattgggCcagggtttccttgacaagaaattatttAaaaatgaaaaagataTttttgaaTtttgatagctttcgtttgatttaccgggTACggtaaacctctctcctcctccccgattaaggtaatggtcgttttgggtctcagtgtttttatagatagctagtgatagatacgcctctcaaaaacggaagttttAaaatacgtgcacacactttgCccttttgcagttgaactcacatgctctgtactccaaagtagacacacacacatgagatttgcagacatccagcttttttttatgATcttgttttttctctgcacaaatccctgttccataaaatttttacagtacaaaaatgttgcacaagcaattaagcaagttttcaaccgatatggtcaagttcattgaaaaacacacacacacaattggattttaaacagagttttttcataagtactataaataactgcttgttctcaattacatAaagttttcataaaagttttAacagcctgatcccaagtacattacatagatgataaccatatcaaagtacacagatgacatatctcttcttttcaacacaacacattgatgatagatgtcTttcagatgaagcgtgaaatgatacatacgaacagggatgggcaactcaaacaatgacagatagtcgacaagtCcgggcataattAttagcacacctcctgtcacaggaggctcttgatgggggcgtaatttttggacatcttttggtacgtgtacacgtactggattattattgggcatttcactctcgagaaagcacgggaaaacttcagTCtctgaacagaaacttgccgaaacaaaactcccttggttgatcatcaaaCatagagcatgatagaaCcaaccctgatgcagactgagatgttggcgatctggtcctctgaggaacCATaaataaacaaggatataaCctacacgatcgtaggtagttaTttagctgagcatagattggacatagcattatgatcatcatcAaacaaaggcaaatgagagAgagagagagagagagagagaTgtttttacctcaagcactaaATtttgttgtgttcaaggagctagcgaactagtgtttggatCctcgTtagtaatgtcgccaccaagagaagggaatgaagggatggacttgagaatcaacttcctgccgctcttgcagatcggagacaatccggtaccaatgcgagggggagagaccctctttttattaggtgacacgaccttgacagaagtttgaggggatgatTCcccttttaggacatttgatgtaccatCcccgagcatcatttctgcgtagctttcgaatggagagagtagaatgtcagacttcaggtgtccttcaagtcgagaagAatatccaccaagcttcgtcgacgatcTtggcttcttggagctcaaaggtggaagagcaaccAagggtctaggaagaagattagaagaacaaaagaaaactgacattttagcaTtttacagaagagattgaatccacagtAacatgagtaaTtgtacgaggcagacctgtaatccacaactgaaggtgttgccagcacactctcagcaggagtaaggttgatactatcttgatagataacaagCtgcttatcaTtatcagtggtttcttccttcacgcctCcatccTTttcttcgcatccacgcttagcttcctctatgcctaacagtgcaactccttcaatggaaaaaggtagagtaccataaaaaaccaataacttataaaccctcgcaaaacgaaaaagaaaggtacctactAatgctatagTAtaggaaTtgttatgttgaacaaaatctgaaacagctatacatgatgtagacttgacctactaagatggttaCcattgtctttactcacttgacagaagtttgaggggatgatttcccTttcagggttctctatgtgcatCccccacaatcatttaaTttccagtaaaaaaacaaatttaaTttaaattattaatgatccaaCctccaaatttaagtaactccatcaattcctacaatgaaatcttacctaggaagtacaTtttcaaacagAatagcatgcaagatattctaagattcctagtgctctcctgtatttaaatttacaagttgaaagatcaaagctgaaCcctctagaaacatatgaaatactatttggaagcaaatatgaacctaaagagcaCCtcctctcccaactaaccttTCcTttgtatctgatatgtacatcacataaaataccacagatgcaactaatCttgagcaatgcatgcaTtttgcacatttataaaacaggatgtcaagatgaaacttaccctccctcctcccaaaagcattCttacaaccctcacatcggCaactcatggagcatccaacaccacccttcattttttttTAagaaaagtgacagtgagacaaatgccaaggggctaagaaaagaatgtcaaatcatgaCctcgtgtaagagctagaacctgataacattcgcagtaTtttttcaaacacgatgacttcttacaattgcagcctcTtttgtgacgagcagaagcaggagttttgttagagtcatcctataatatagcaaggattatatgagcagtagcacgtaacaaaggagaaaggaagtaaaacaaagagagtggCTcttacagctaattcctgaccaggctcagtgcgaattactttaggagcaaatgcaagtggattacgagactcaatctgctctcgagtcgatagaactgtttccatgttgctaggcttattcagacagccttgacacgaacaaggttctgaacaaaagacaccagcatgaaaacactcacagtacctgcataagaattagccaacaatgacattatattagagatgatgcttgacagaacaCATCtcaacaagaagacagaacttctccagaaatatcttgtaaataacaaatgaaactcttcaaaggagcaatatggagaTtcagaaacatctaaaaTggtttcttattttctaatgctaacttaataaaattgctagacggctagagaaccAagagaaacctgaacatgcagcAagtgcatgccctgcaggtccatgtcaacagtatagcagtctgtaattttgttcataagaaatggctatccagaagatcaaATttcatgtatcaatatcaggcctattgtactagtaatatcagcagaatggtccactgcaaactcaagtattgtgctttttagtatttaaccatgtctaggaaaacaagcaaaatgacatgttccacaggcataacaccagctttCtgttttaggattgctcatgttgaaTtgtcctcatcatcatcaaatttgttgcacacatgtgaacgacagaaagacaatggtggggctcaacaacattaagaagaaaactgacaagcctagagagttatcactttccTtttgcaacaatgctacagtaatgactgggtggtcccaTttcccaactgcatgagtccaaaccagcCAaagggcattaaattatttttattggtttttcacttcTgactatccattctcccatgcttaccagccatatcggtctattttagtttacaaatgatacccaactggaaaTttgacagcttgtgcattgtgacaaaaaacttttctaaccatgtttctgaaacaaagattgtagtgccgtttcagaagctcctaaaTttttcaattttttaatacaaagctacTtgcaaaagcttctttttTGgaggcaggacagaagaagttttaaaaTtaacatagctaactagattccatGgagcagtacacagtcccaaaaactagcccagggcaatatgttgacatctacgagctcaggaaTGtgtgacagttgaagaaatgatactgtagatatgactggaaaaggaagCctgaacactgtgcatcaacttgtcataaatcatatatGatcaaagcaattattttctattatgcactccaCccaaaacttggagtgCctgataCaacaTatatgtttatctcaccgccactacttcataaacaggaaaaaaacatggacgtgttcatcctaaacctcaagcactaataaacaattgatacctcagaccaaccaatatcTtgacatgttttcactctgaaTtaacctggttggcTtgttgcatattatgagaaacaattgagAaaagaaggtgtagaacaacttacagcttcaagcaTtttgacttcTtacagctacaacgcTtgcacgacgtgccatcaCcattgtcgaacttgTgtctgcatagcattattgtgtttcatgatttgcccagggaaatggTtctcaTgacctataataatgggcatagaaacaaagtaccttttcttcttgggactaccctgactcgattcaccaacatatgcaaccacggctgtctgggaGgagtcatcatttatagtatgtggatcatctgttggtggagaagaaccaacagcagacggaacaTtgctggcttgattcaaagaggattgaatgtcattatggggaaccattttatcctttggcactgtggcaagggcattcaaatgcaagccaataccaggcaatgcaCatggaggggtcctcagagtctttaagttgttatcactggaactaatcttgcgTCtgggtgtggTtgaatttgtagaatgacgagCtgaggagttctttgcacctttattagcagctccactcTtttcattgaaaaggcaaCgtctacgcatgccAcgtaaATtctgtgatgacacctaccgaaacaagaaaacagattgtttgCTtagtttattaccacgacccacaagaataaacattgatacttcaattcagattagcaatatataaacattgaaacttaggttatcaaaTtgagcgtgtcacaaagaaaaaaatgcatgaagagaagaccTttgtttgccaaattgctggttaatttaaTtttcaagctcTtaatataTtgtttataaatgcactgctgcatttagttagacaaagaaTttgctatgatttatcagcaaaaCcaacaagtgaatatctccaattgggtagtagcaagaagaatacatacattgtggtccaTtggcatgtaatcactgggctcgttgagcttgtTAatgaTttgatcatttggCaccaaCtggctttgacaagcaccagggagcatttggggggtataatctgttgcacacccttcaactgCcccagcccagtaaagatgaggatcaggtgcagaattttgtgtgtaagagccacttggCccatcggtcaacaaggtttcacagtagacaTtatctgtttgtaatgtctcattcactaactgTgtttctgactcaaatggtggagctaatctcagcatatcactatgtggttgatgtgcaaacatgtaaCccccatcaaatgacccaagttcatccttgtgttgttcagacagttggttttcacaagcattattaCctgactgtgatgaatccaTtttttctggtccacaCtgatcaaataggacgaattctatgtctgtacggtcTtgctctgtagtgggatccTttttaccatcagtaTtttgattcgtatcactttctgcactgCcgccacaaagctggatggGTtgagatgctttacttgaagttgaatcatttaggtaacaAGgtatactgcaattttctgaaacaatgTttttgcatctgatcattctaataatagagcttgtggCccctgttcgagttctgacactgTtcggagagtgcgattctcgagaaagttgaacagaaTCttccctggttaatatggagatacatgtagatatagtaagctaaagcctaaaaggatgaaattacattcaactagaaaatagcataaatttacctgattggaagtttAGattcctttgcaggattgacatgtggtgaggcaaagattgaggaaacaggagccaagtctgatgacttgaatagTtgaaCattatgtgctgagtctgaaggcttaggtggtggtataggagataggctgttgatgaaattgaagacaggagagtcctgcaggcacaaaaaacgaattagagagtagattgcaaggtttttcatttgacaacaattaaaatggaaggtcttcatttcataatagCTtcacgcgtataaaagttagcttaaagtaataaggcattctgtgaaatactaatccaaacgtaatgcgcggttttcgattagttatggatagcccaaagcaatcaaagcctCctgcttCcgcaagcaaatacatgatttcccatatcTtgttgtagttaaagtcatccccagatagtcatcagaaACagttTACagttggTtgttaaGgccctctttgtttaggCttaggcttattggcttatatgatttataagccggtggataatgtcctaagTttagtggtggtgtcatacatctagctcacataagccaaaaaaataTttctccaacctagctttTGgcttAactgtgtagtgccttatggcttcaaaaaagccaaacgaaaaggctgcttgtttgtttaggctgactttttgacttataagttggcttataagcctaaacAaaagggcctaagtacTttgaacagcttagatcaaatagTtgttcagtctagccaggtcaaagttcagaagcgttccagaaaaaacaggaagtgcaagacacgacAaaaaaaaaccagatcctaactagcacaagggttcttccatgatcaagtagaatgCccaatggagctCctcagctgaaccagaatcgatcaaatcagcgagcattgcattaagccacagatctaagcaatggttccctaaacacaaatcatccattttctcgacaTttgacatggacaactgaaccaaatcgaaccacaCtgctgtgagccacggatctattgcacttagttCccccaactaaaacagcccatctctCttaccagagcgctctgataggaaacgaaatggatattcagacaagcaaacctgaatcgagacttctagcacgattaggccccAatccggagcggcgaatggccgcaacatctagggagatcatgttgattagacacggAatcaaacCccacaacatctcctcctacaaaacccccttccatccctcaaatccagcaccgcgttaagctcaacaatggatgagcaaaaacccctaatccccccacccaacacaCccgcttaatCcccccaccaatgaactggacgagcgaatcCaaccccccaaaaaaACaaaaatcagaagtaaaaataAATaaataaaaaacaaataaaccgaagccccaaatcggctCcccccgcagccgccgccgccgccccctAacccgaaaccccTcctaaaatcgaCcccaaaaaaataagtccactcgacgagcgagccccagcatcccggacctcgacggccgcggtggcggcggcggcggcggcggcggCgcgggggggcctatccggcgtgtccatctccggcggcggcggcggcggcggccacgcgggggatctcccgcatccgcctccgcctcctcctcggctgtggctgctggcgagtgaggagtaggcggaggaggagtgcgctgctgCtgctgatgctgatgctgctccactagtggttttactgggcctttgCcctgacacgaggcgaggaggctgctcttccggtttCttcTcttctTCtctcttgTtat
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| CDS seq | atggacacgccggataggcccccccgcGccgccgccgccgccgccgcccaggactctcctgtcttcaatttcatcaacagcctatctcctataccaccacctaagccttcagactcagcacataatGttcaActattcaagtcatcagacttggctcctgtttcctcaatctttgcctcaccacatgtcaatcctgcaaaggaatCTaaacttccaatcagggaaGAttctgttcaactttctcgagaatcgcactctccgaAcagtgtcagaactcgaacagggGccacaagctctattattagaatgatcagatgcaaaaAcattgtttcagaaaattgcagtatacCTtgttacctaaatgattcaacttcaagtaaagcatctcaACccatccagctttgtggcgGcagtgcagaaagtgatacgaatcaaaAtactgatggtaaaaAggatcccactacagagcaAgaccgtacagacatagaattcgtcctatttgatcaGtgtggaccagaaaaaAtggattcatcacagtcagGtaataatgcttgtgaaaaccaactgtctgaacaacacaaggatgaacttgggtcatttgatggggGttacatgtttgcacatcaaccacatagtgatatgctgagattagctccaccatttgagtcagaaacAcagttagtgaatgagacattacaaacagataAtgtctactgtgaaaccttgttgaccgatggGccaagtggctcttacacacaaaattctgcacctgatcctcatctttactgggctgggGcagttgaagggtgtgcaacagattataccccccaaatgctccctggtgcttgtcaaagccaGttggtGccaaatgatcaaAtcatTAacaagctcaacgagcccagtgattacatgccaAtggaccacaatgtgtcatcacagaATttacgTggcatgcgtagacGttgccttttcaatgaaaAgagtggagctgctaataaaggtgcaaagaactcctcaGctcgtcattctacaaattcaAccacacccaGAcgcaagattagttccagtgataacaacttaaagactctgaggacccctccatGtgcattgcctggtattggcttgcatttgaatgcccttgccacagtgccaaaggataaaatggttccccataatgacattcaatcctctttgaatcaagccagcaAtgttccgtctgctgttggttcttctccaccaacagatgatccacatactataaatgatgactcCtcccagacagccgtggttgcatatgttggtgaatcgagtcagggtagtcccaagaagaaaagacAcaagttcgacaatgGtgatggcacgtcgtgcaAgcgttgtagctgtaAgaagtcaaaAtgcttgaagctgtactgtgagtgttttcatgctggtgtcttttgttcagaaccttgttcgtgtcaaggctgtctgaataagcctagcaacatggaaacagttctatcgactcgagagcagattgagtctcgtaatccacttgcatttgctcctaaagtaattcgcactgagcctggtcaggaattagctggtggtgttggatgctccatgagttGccgatgtgagggttgtaaGaatgcttttgggaggagggagggagttgcactgttaggcatagaggaagctaagcgtggatgcgaagaaAAggatgGaggcgtgaaggaagaaaccactgataAtgataagcaGcttgttatctatcaagatagtatcaaccttactcctgctgagagtgtgctggcaacaccttcagttgtggattacagaccctTggttgctcttccacctttgagctccaagaagccaAgatcgtcgacgaagcttggtggatatTcttctcgacttgaaggacacctgaagtctgacattctactctctccattcgaaagctacgcagaaatgatgctcgggGatggtacatcaaatgtcctaaaagggGAatcatcccctcaaacttctgtcaaggtcgtgtcacctaataaaaagagggtctctccccctcgcattggtaccggattgtctccgatctgcaagagcggcaggaagttgattctcaagtccatcccttcattcccttctcttggtggcgacattactaAcgagGatccaaacactaaggaccagatcgccaacatctcagtctgcatcaggcgaacccctcctccgccgccgccgccggagatcgcccgctgtcccgccaatccgccgctgcggcctctggttgtcgtcgcgaagccggcgcctgcgctcagctgggatgGcgtcgagtggagatccatcggcagtcgtcgactgctagaagagctcgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaagcttttctgcgataaggactacccagacaggccaccaactgtaaaAtttcactcaagaatcaacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatggcggcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag
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| Protein seq | MDTPDRPPRAAAAAAAQDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFASPHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSIPCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLFDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQIINKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANKGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELAGGVGCSMSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDITNEDPNTKDQIANISVCIRRTPPPPPPPEIARCPANPPLRPLVVVAKPAPALSWDGVEWRSIGSRRLLEELERGEKGIGDGSVSYGMDDADDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDRPPTVKFHSRINMTCVNPENGLVDQRKFSLLSNWRREYTMEAILTQLKKEMAASHNRKLVQPPEGTFF |
||||||||||
| Function | Ubiquitin-conjugating enzyme E2 variant 1C [UniProtKB/Swiss-Prot:Q9SJ44] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0019180 | OsNaBo_12g0019180.04 | Chr12 | 23646191 | 23653230 | - | NAM | ||
| CDS seq | atgatcagatgcaaaaAcattgtttcagaaaattgcagtatacCTtgttacctaaatgattcaacttcaagtaaagcatctcaACccatccagctttgtggcgGcagtgcagaaagtgatacgaatcaaaAtactgatggtaaaaAggatcccactacagagcaAgaccgtacagacatagaattcgtcctatttgatcaGtgtggaccagaaaaaAtggattcatcacagtcagGtaataatgcttgtgaaaaccaactgtctgaacaacacaaggatgaacttgggtcatttgatggggGttacatgtttgcacatcaaccacatagtgatatgctgagattagctccaccatttgagtcagaaacAcagttagtgaatgagacattacaaacagataAtgtctactgtgaaaccttgttgaccgatggGccaagtggctcttacacacaaaattctgcacctgatcctcatctttactgggctgggGcagttgaagggtgtgcaacagattataccccccaaatgctccctggtgcttgtcaaagccaGttggtGccaaatgatcaaAtcatTAacaagctcaacgagcccagtgattacatgccaAtggaccacaatgtgtcatcacagaATttacgTggcatgcgtagacGttgccttttcaatgaaaAgagtggagctgctaataaaggtgcaaagaactcctcaGctcgtcattctacaaattcaAccacacccaGAcgcaagattagttccagtgataacaacttaaagactctgaggacccctccatGtgcattgcctggtattggcttgcatttgaatgcccttgccacagtgccaaaggataaaatggttccccataatgacattcaatcctctttgaatcaagccagcaAtgttccgtctgctgttggttcttctccaccaacagatgatccacatactataaatgatgactcCtcccagacagccgtggttgcatatgttggtgaatcgagtcagggtagtcccaagaagaaaagacAcaagttcgacaatgGtgatggcacgtcgtgcaAgcgttgtagctgtaAgaagtcaaaAtgcttgaagctgtactgtgagtgttttcatgctggtgtcttttgttcagaaccttgttcgtgtcaaggctgtctgaataagcctagcaacatggaaacagttctatcgactcgagagcagattgagtctcgtaatccacttgcatttgctcctaaagtaattcgcactgagcctggtcaggaattagctgatgactctaacaaaactcctgcttctgctcgtcacaaaAgaggctgcaattgtaagaagtcatcgtgtttgaaaaaAtactgcgaatgttatcagggtggtgttggatgctccatgagttGccgatgtgagggttgtaaGaatgcttttgggaggagggagggagttgcactgttaggcatagaggaagctaagcgtggatgcgaagaaAAggatgGaggcgtgaaggaagaaaccactgataAtgataagcaGcttgttatctatcaagatagtatcaaccttactcctgctgagagtgtgctggcaacaccttcagttgtggattacagaccctTggttgctcttccacctttgagctccaagaagccaAgatcgtcgacgaagcttggtggatatTcttctcgacttgaaggacacctgaagtctgacattctactctctccattcgaaagctacgcagaaatgatgctcgggGatggtacatcaaatgtcctaaaagggGAatcatcccctcaaacttctgtcaaggtcgtgtcacctaataaaaagagggtctctccccctcgcattggtaccggattgtctccgatctgcaagagcggcaggaagttgattctcaagtccatcccttcattcccttctcttggtggcgacattactaAcgagGatccaaacactagttcgctagctccttga
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| Protein seq | MIRCKNIVSENCSIPCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLFDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQIINKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANKGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELADDSNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSMSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDITNEDPNTSSLAP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0019180 | OsNaBo_12g0019180.01 | Chr12 | 23643375 | 23653500 | - | NAM | ||
| CDS seq | atggacacgccggataggcccccccgcGccgccgccgccgccgccgcccaggactctcctgtcttcaatttcatcaacagcctatctcctataccaccacctaagccttcagactcagcacataatGttcaActattcaagtcatcagacttggctcctgtttcctcaatctttgcctcaccacatgtcaatcctgcaaaggaatCTaaacttccaatcagggaaGAttctgttcaactttctcgagaatcgcactctccgaAcagtgtcagaactcgaacagggGccacaagctctattattagaatgatcagatgcaaaaAcattgtttcagaaaattgcagtatacCTtgttacctaaatgattcaacttcaagtaaagcatctcaACccatccagctttgtggcgGcagtgcagaaagtgatacgaatcaaaAtactgatggtaaaaAggatcccactacagagcaAgaccgtacagacatagaattcgtcctatttgatcaGtgtggaccagaaaaaAtggattcatcacagtcagGtaataatgcttgtgaaaaccaactgtctgaacaacacaaggatgaacttgggtcatttgatggggGttacatgtttgcacatcaaccacatagtgatatgctgagattagctccaccatttgagtcagaaacAcagttagtgaatgagacattacaaacagataAtgtctactgtgaaaccttgttgaccgatggGccaagtggctcttacacacaaaattctgcacctgatcctcatctttactgggctgggGcagttgaagggtgtgcaacagattataccccccaaatgctccctggtgcttgtcaaagccaGttggtGccaaatgatcaaAtcatTAacaagctcaacgagcccagtgattacatgccaAtggaccacaatgtgtcatcacagaATttacgTggcatgcgtagacGttgccttttcaatgaaaAgagtggagctgctaataaaggtgcaaagaactcctcaGctcgtcattctacaaattcaAccacacccaGAcgcaagattagttccagtgataacaacttaaagactctgaggacccctccatGtgcattgcctggtattggcttgcatttgaatgcccttgccacagtgccaaaggataaaatggttccccataatgacattcaatcctctttgaatcaagccagcaAtgttccgtctgctgttggttcttctccaccaacagatgatccacatactataaatgatgactcCtcccagacagccgtggttgcatatgttggtgaatcgagtcagggtagtcccaagaagaaaagacAcaagttcgacaatgGtgatggcacgtcgtgcaAgcgttgtagctgtaAgaagtcaaaAtgcttgaagctgtactgtgagtgttttcatgctggtgtcttttgttcagaaccttgttcgtgtcaaggctgtctgaataagcctagcaacatggaaacagttctatcgactcgagagcagattgagtctcgtaatccacttgcatttgctcctaaagtaattcgcactgagcctggtcaggaattagctggtggtgttggatgctccatgagttGccgatgtgagggttgtaaGaatgcttttgggaggagggagggagttgcactgttaggcatagaggaagctaagcgtggatgcgaagaaAAggatgGaggcgtgaaggaagaaaccactgataAtgataagcaGcttgttatctatcaagatagtatcaaccttactcctgctgagagtgtgctggcaacaccttcagttgtggattacagaccctTggttgctcttccacctttgagctccaagaagccaAgatcgtcgacgaagcttggtggatatTcttctcgacttgaaggacacctgaagtctgacattctactctctccattcgaaagctacgcagaaatgatgctcgggGatggtacatcaaatgtcctaaaagggGAatcatcccctcaaacttctgtcaaggtcgtgtcacctaataaaaagagggtctctccccctcgcattggtaccggattgtctccgatctgcaagagcggcaggaagttgattctcaagtccatcccttcattcccttctcttggtggcgacattactaAcgagGatccaaacactaaggaccagatcgccaacatctcagtctgcatcaggcgaacccctcctccgccgccgccgccggagatcgcccgctgtcccgccaatccgccgctgcggcctctggttgtcgtcgcgaagccggcgcctgcgctcagctgggatgGcgtcgagtggagatccatcggcagtcgtcgactgctagaagagctcgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaagcttttctgcgataaggactacccagacaggccaccaactgtaaaAtttcactcaagaatcaacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatggcggcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag
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| Protein seq | MDTPDRPPRAAAAAAAQDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFASPHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSIPCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLFDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQIINKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANKGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELAGGVGCSMSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDITNEDPNTKDQIANISVCIRRTPPPPPPPEIARCPANPPLRPLVVVAKPAPALSWDGVEWRSIGSRRLLEELERGEKGIGDGSVSYGMDDADDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDRPPTVKFHSRINMTCVNPENGLVDQRKFSLLSNWRREYTMEAILTQLKKEMAASHNRKLVQPPEGTFF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0019180 | OsNaBo_12g0019180.05 | Chr12 | 23638372 | 23645674 | - | NAM | ||
| CDS seq | atgaatctagtgatgctctgcagatttggctatgtttctgaagtgGAGGCGTCGCCCGATCCGATGTCGGCCGCGGAGGATCCCGCGAAGCCCCCGCCCCCACCCCCGCCGCAGCTCGAGGCGTCCGGATCGGACCCCGACGACCCCCTCCTCCGCGACCGCGTCGTCGTCGTCGCCCCTCCCCCTCCCCCGCCACCACCACCACCACCACCAGCACCCGCCCCCGCCCTCCTCGCCCCCGCCGAGAACGCCTCCGCGGAAGCCGCCTTCGCCGTGCCGCCGGCGGCGATCGCGGCGGTGggaggagcaggatgctccatcaactgtaaatgtgatgattgcaagaacccatatgggagaaaagttggtgttattttggatggtaaaaatattcttgctggaccaacaccaaatgaaaggaatggaacagaagctgactcaagtgacgatgaagaagatgattattatatgaaccgaccactctcgcctgtctccccatctccagtatccagagagtcttcattccaacaggagactttagttggcgtcgaagtccagactatgaatgggcatctatacccaaaAccgcttacccaagtgcggccggaatcatggcagctcactaggaggcctactgaggaagtgcgaggagaggcatggcactacttgaggaggcccagtgaggatggaacatccgatgttatggaaggacatgctgaccccaagtttcagagagacaataaacagctggaaaaccatgttgataggtacagcattccgcggtgcatcgaggtgatgaacgccatggcagacctctcgccaatcgagaagtcgctcgcaccggacgtcttcttggatccaagcaatcggGagatttttctttcactgactgtagatattcgaaccatgtggctgaagcgtaagatgaagagccttgtgtag
More
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| Protein seq | MNLVMLCRFGYVSEVEASPDPMSAAEDPAKPPPPPPPQLEASGSDPDDPLLRDRVVVVAPPPPPPPPPPPPAPAPALLAPAENASAEAAFAVPPAAIAAVGGAGCSINCKCDDCKNPYGRKVGVILDGKNILAGPTPNERNGTEADSSDDEEDDYYMNRPLSPVSPSPVSRESSFQQETLVGVEVQTMNGHLYPKPLTQVRPESWQLTRRPTEEVRGEAWHYLRRPSEDGTSDVMEGHADPKFQRDNKQLENHVDRYSIPRCIEVMNAMADLSPIEKSLAPDVFLDPSNREIFLSLTVDIRTMWLKRKMKSLV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0019180 | OsNaBo_12g0019180.02 | Chr12 | 23646191 | 23653325 | - | NAM | ||
| CDS seq | atgcgggagatcccccgcgactctcctgtcttcaatttcatcaacagcctatctcctataccaccacctaagccttcagactcagcacataatGttcaActattcaagtcatcagacttggctcctgtttcctcaatctttgcctcaccacatgtcaatcctgcaaaggaatCTaaacttccaatcagggaaGAttctgttcaactttctcgagaatcgcactctccgaAcagtgtcagaactcgaacagggGccacaagctctattattagaatgatcagatgcaaaaAcattgtttcagaaaattgcagtatacCTtgttacctaaatgattcaacttcaagtaaagcatctcaACccatccagctttgtggcgGcagtgcagaaagtgatacgaatcaaaAtactgatggtaaaaAggatcccactacagagcaAgaccgtacagacatagaattcgtcctatttgatcaGtgtggaccagaaaaaAtggattcatcacagtcagGtaataatgcttgtgaaaaccaactgtctgaacaacacaaggatgaacttgggtcatttgatggggGttacatgtttgcacatcaaccacatagtgatatgctgagattagctccaccatttgagtcagaaacAcagttagtgaatgagacattacaaacagataAtgtctactgtgaaaccttgttgaccgatggGccaagtggctcttacacacaaaattctgcacctgatcctcatctttactgggctgggGcagttgaagggtgtgcaacagattataccccccaaatgctccctggtgcttgtcaaagccaGttggtGccaaatgatcaaAtcatTAacaagctcaacgagcccagtgattacatgccaAtggaccacaatgtgtcatcacagaATttacgTggcatgcgtagacGttgccttttcaatgaaaAgagtggagctgctaataaaggtgcaaagaactcctcaGctcgtcattctacaaattcaAccacacccaGAcgcaagattagttccagtgataacaacttaaagactctgaggacccctccatGtgcattgcctggtattggcttgcatttgaatgcccttgccacagtgccaaaggataaaatggttccccataatgacattcaatcctctttgaatcaagccagcaAtgttccgtctgctgttggttcttctccaccaacagatgatccacatactataaatgatgactcCtcccagacagccgtggttgcatatgttggtgaatcgagtcagggtagtcccaagaagaaaagacAcaagttcgacaatgGtgatggcacgtcgtgcaAgcgttgtagctgtaAgaagtcaaaAtgcttgaagctgtactgtgagtgttttcatgctggtgtcttttgttcagaaccttgttcgtgtcaaggctgtctgaataagcctagcaacatggaaacagttctatcgactcgagagcagattgagtctcgtaatccacttgcatttgctcctaaagtaattcgcactgagcctggtcaggaattagctgatgactctaacaaaactcctgcttctgctcgtcacaaaAgaggctgcaattgtaagaagtcatcgtgtttgaaaaaAtactgcgaatgttatcagggtggtgttggatgctccatgagttGccgatgtgagggttgtaaGaatgcttttgggaggagggagggagttgcactgttaggcatagaggaagctaagcgtggatgcgaagaaAAggatgGaggcgtgaaggaagaaaccactgataAtgataagcaGcttgttatctatcaagatagtatcaaccttactcctgctgagagtgtgctggcaacaccttcagttgtggattacagaccctTggttgctcttccacctttgagctccaagaagccaAgatcgtcgacgaagcttggtggatatTcttctcgacttgaaggacacctgaagtctgacattctactctctccattcgaaagctacgcagaaatgatgctcgggGatggtacatcaaatgtcctaaaagggGAatcatcccctcaaacttctgtcaaggtcgtgtcacctaataaaaagagggtctctccccctcgcattggtaccggattgtctccgatctgcaagagcggcaggaagttgattctcaagtccatcccttcattcccttctcttggtggcgacattactaAcgagGatccaaacactagttcgctagctccttga
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| Protein seq | MREIPRDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFASPHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSIPCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLFDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQIINKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANKGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELADDSNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSMSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDITNEDPNTSSLAP
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0019180 | OsNaBo_12g0019180.03 | Chr12 | 23646191 | 23653325 | - | NAM | ||
| CDS seq | atgcgggagatcccccgcgactctcctgtcttcaatttcatcaacagcctatctcctataccaccacctaagccttcagactcagcacataatGttcaActattcaagtcatcagacttggctcctgtttcctcaatctttgcctcaccacatgtcaatcctgcaaaggaatCTaaacttccaatcagggaaGAttctgttcaactttctcgagaatcgcactctccgaAcagtgtcagaactcgaacagggGccacaagctctattattagaatgatcagatgcaaaaAcattgtttcagaaaattgcagtatacCTtgttacctaaatgattcaacttcaagtaaagcatctcaACccatccagctttgtggcgGcagtgcagaaagtgatacgaatcaaaAtactgatggtaaaaAggatcccactacagagcaAgaccgtacagacatagaattcgtcctatttgatcaGtgtggaccagaaaaaAtggattcatcacagtcagGtaataatgcttgtgaaaaccaactgtctgaacaacacaaggatgaacttgggtcatttgatggggGttacatgtttgcacatcaaccacatagtgatatgctgagattagctccaccatttgagtcagaaacAcagttagtgaatgagacattacaaacagataAtgtctactgtgaaaccttgttgaccgatggGccaagtggctcttacacacaaaattctgcacctgatcctcatctttactgggctgggGcagttgaagggtgtgcaacagattataccccccaaatgctccctggtgcttgtcaaagccaGttggtGccaaatgatcaaAtcatTAacaagctcaacgagcccagtgattacatgccaAtggaccacaatgtgtcatcacagaATttacgTggcatgcgtagacGttgccttttcaatgaaaAgagtggagctgctaataaaggtgcaaagaactcctcaGctcgtcattctacaaattcaAccacacccaGAcgcaagattagttccagtgataacaacttaaagactctgaggacccctccatGtgcattgcctggtattggcttgcatttgaatgcccttgccacagtgccaaaggataaaatggttccccataatgacattcaatcctctttgaatcaagccagcaAtgttccgtctgctgttggttcttctccaccaacagatgatccacatactataaatgatgactcCtcccagacagccgtggttgcatatgttggtgaatcgagtcagggtagtcccaagaagaaaagacAcaagttcgacaatgGtgatggcacgtcgtgcaAgcgttgtagctgtaAgaagtcaaaAtgcttgaagctgtactgtgagtgttttcatgctggtgtcttttgttcagaaccttgttcgtgtcaaggctgtctgaataagcctagcaacatggaaacagttctatcgactcgagagcagattgagtctcgtaatccacttgcatttgctcctaaagtaattcgcactgagcctggtcaggaattagctgatgactctaacaaaactcctgcttctgctcgtcacaaaAgaggctgcaattgtaagaagtcatcgtgtttgaaaaaAtactgcgaatgttatcagggtggtgttggatgctccatgagttGccgatgtgagggttgtaaGaatgcttttgggaggagggagggagttgcactgttaggcatagaggaagctaagcgtggatgcgaagaaAAggatgGaggcgtgaaggaagaaaccactgataAtgataagcaGcttgttatctatcaagatagtatcaaccttactcctgctgagagtgtgctggcaacaccttcagttgtggattacagaccctTggttgctcttccacctttgagctccaagaagccaAgatcgtcgacgaagcttggtggatatTcttctcgacttgaaggacacctgaagtctgacattctactctctccattcgaaagctacgcagaaatgatgctcgggGatggtacatcaaatgtcctaaaagggGAatcatcccctcaaacttctgtcaaggtcgtgtcacctaataaaaagagggtctctccccctcgcattggtaccggattgtctccgatctgcaagagcggcaggaagttgattctcaagtccatcccttcattcccttctcttggtggcgacattactaAcgagGatccaaacactagttcgctagctccttga
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| Protein seq | MREIPRDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFASPHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSIPCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLFDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQIINKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANKGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELADDSNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSMSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDITNEDPNTSSLAP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr12 | 23644320 | 23645441 | - | OsNaBo_12g0019180.05 | OsNaBo_12g0019180.05,OsNaBo_12g0019180.01 | All |
| A3 | Chr12 | 23646740 | 23646853 | - | OsNaBo_12g0019180.03 | OsNaBo_12g0019180.04,OsNaBo_12g0019180.03 | All |
| RI | Chr12 | 23646191 | 23647243 | - | OsNaBo_12g0019180.02 | OsNaBo_12g0019180.02,OsNaBo_12g0019180.03 | All |
| RI | Chr12 | 23646191 | 23647243 | - | OsNaBo_12g0019180.02 | OsNaBo_12g0019180.04,OsNaBo_12g0019180.02 | All |
| SE | Chr12 | 23648199 | 23648467 | - | OsNaBo_12g0019180.04,OsNaBo_12g0019180.02,OsNaBo_12g0019180.03 | OsNaBo_12g0019180.04,OsNaBo_12g0019180.02,OsNaBo_12g0019180.01,OsNaBo_12g0019180.03 | All |
| AF | Chr12 | 23651846 | 23653325 | - | OsNaBo_12g0019180.04 | OsNaBo_12g0019180.04,OsNaBo_12g0019180.02,OsNaBo_12g0019180.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.201724 | 63.112083 | 21.555706 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0605500 | RBH | 0.160619 | 0.158709 | 2.746260 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g41230 | RBH | 0.103764 | 0.105357 | 0.685695 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0605500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0020030 | RBH | 0.0 | 19.984631 | 3.255469 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0020130 | RBH | 0.0 | 7.505918 | 2.753450 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0020450 | RBH | 5.062156 | 94.553566 | 37.724693 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0019770 | RBH | 0.067341 | 1.045965 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0019350 | RBH | 0.329504 | 38.627224 | 11.545323 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0341600 | RBH | 4.787423 | 13.0458575 | 13.58215 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0019230 | RBH | 0.000000 | 1.235325 | 0.611812 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0372400 | RBH | 22.7314995 | 34.8899935 | 63.8671455 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0019480 | RBH | 0.0 | 0.645803 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0019700 | RBH | 0.284255 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0019620 | RBH | 0.0 | 40.189411 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0019670 | RBH | 2.975375 | 0.0 | 9.019205 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019830 | RBH | 0.757137 | 53.802593 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G019490 | RBH | 0.0 | 7.525427 | 1.097969 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0026920 | RBH | 0.000000 | 0.0 | 0.0 |
