Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_12g0004770 | OGI:12009210 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr12:3588102-3589933 | ||||||||
| Gene Symbol | WRI1-2, AP2/EREBP155, AP2/EREBP#155, OsWRI1-2, OsWRI1b, ERF124, DERF8, OsDERF8, OsERF#124, OsERF124, AP2/EREBP#158, AP2/EREBP158, ERF110, OsERF#110, OsERF110, AP2/EREBP#008, AP2/EREBP8 | ||||||||||
| DNA seq | gtgagcggcggccgtcgtcgtcggcggcggcggtgggagggtggcgtgctcggggaagttgagcttggcgcggctgccgcggaagcggagggcggcgccgtcgtaggcgcgggcggcgtcctcggcggtgtcgaaggtgccgagccacacgcgcgccgccttgtgcgggtcccggatctccgccgcccacttcccccacggccgctgccgcacccctctgtaccgcttcctcgccgtgccgccgccgccgccgctggagtcggccgaggacggcgacgggagctcctcctcgtcgccggccgccgccgacgcaggcgagtgttgCcccggcgatggcacgtagcctgcgaacgcgtaaaaaaaagaaaaaaaacaggggagattaggacaagaacctgttttgattagcgcttaattatctatagtaataaaattcaattattttcatgtatccatactaataatatccagaaactatgtagtaaaaaaagtttgtaacacagtgatttgagctgtgattttttaaagtaatttgatctggttaatttggttactctgttttgcttctctctctttgagatactctgattttcttctcacttgctctgtttttgtgttaaactaatacaaaaggtgacatgcaaacttctcttggatgatcagaatgttcctatattttaatgtcaatgcggactactggttttaactagtcacaagttcatttcgtgtgTttgtttttaaaacaaagttcatttcgtgtgtttgatgctaagaatgacgaaacgtggcgattaaggaacacgtgTttggttgctagtgagctacccatcccattgtttctcttaatcttttccctaatgaataaattaagcccatgggatctcttaattttatccataacaatgattataTtagttgcgatgtggcggtggttggagcagcctctgctcgtgtgacgcgtggatccacacgtgcacattgaccaacccataagctttgcttatgcattgctgcaagatgcgtgcacgtcgtgtgtgttagtgtaaacaccactaaactataaaaatatactcttgaataaaacaaagagaaaataacAaaaataataaagcttatcattcattttagttgtgctttatcagtcattcaaatttctcttactattagtcatataaaattgcaaattatacgtagttttactgttttgttcatgattttctcaattgtaatttttcatatcaataaggttcaaaatcaatcctccTttttttttcaccaaaggAaaagagagatgcatgcaTtttagttaatgttaatcatcaacctaatggttaattagaaaaagtgatagagagaacaagcaagtcactttgtgatcaatgtaatcatgattatattagtttggttaattaacaaagtccgaggtagactttaattaatcatgttgcattcaacttttactatactgctctgcatacgtacacgtacgtaccggccggaaatggagccgccggcgacggcgcggcggcggcggcggcgagctcactgcagtacgaccaccacaccccctccacggcggcgccctcctcgggctctctctcggccggcctcttcgccggcaacgacgtgccgccgccgccggccacgacactcgccagcgccgacaccatcgccgccatctcctccgcctgcctccgccgcgacagcatcggcgccgcaaacaacgacgacgacgtcgtcgccaccgcgccctcgtcgccgccggcgtcggcgtcgagcggccgccgccgctgctctccgggtcccgccacctcgtcgccggtacagcacat
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| CDS seq | atgtgctgtaccggcgacgaggtggcgggacccggagagcagcggcggcggccgctcgacgccgacgccggcggcgacgagggcgcggtggcgacgacgtcgtcgtcgttgtttgcggcgccgatgctgtcgcggcggaggcaggcggaggagatggcggcgatggtgtcggcgctggcgagtgtcgtggccggcggcggcggcacgtcgttgccggcgaagaggccggccgagagagagcccgaggagggcgccgccgtggagggggtgtggtggtcgtactgcagtgagctcgccgccgccgccgccgcgccgtcgccggcggctccatttccggccggctacgtgccatcgccgggGcaacactcgcctgcgtcggcggcggccggcgacgaggaggagctcccgtcgccgtcctcggccgactccagcggcggcggcggcggcacggcgaggaagcggtacagaggggtgcggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctccgcttccgcggcagccgcgccaagctcaacttccccgagcacgccaccctcccaccgccgccgccgacgacgacggccgccgctcac
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| Protein seq | MCCTGDEVAGPGEQRRRPLDADAGGDEGAVATTSSSLFAAPMLSRRRQAEEMAAMVSALASVVAGGGGTSLPAKRPAEREPEEGAAVEGVWWSYCSELAAAAAAPSPAAPFPAGYVPSPGQHSPASAAAGDEEELPSPSSADSSGGGGGTARKRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNFPEHATLPPPPPTTTAAAH |
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| Function | Ethylene-responsive transcription factor ERF112 [UniProtKB/Swiss-Prot:P93007] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0004770 | OsNaBo_12g0004770.01 | Chr12 | 3588102 | 3589933 | - | NAM | ||
| CDS seq | atgtgctgtaccggcgacgaggtggcgggacccggagagcagcggcggcggccgctcgacgccgacgccggcggcgacgagggcgcggtggcgacgacgtcgtcgtcgttgtttgcggcgccgatgctgtcgcggcggaggcaggcggaggagatggcggcgatggtgtcggcgctggcgagtgtcgtggccggcggcggcggcacgtcgttgccggcgaagaggccggccgagagagagcccgaggagggcgccgccgtggagggggtgtggtggtcgtactgcagtgagctcgccgccgccgccgccgcgccgtcgccggcggctccatttccggccggctacgtgccatcgccgggGcaacactcgcctgcgtcggcggcggccggcgacgaggaggagctcccgtcgccgtcctcggccgactccagcggcggcggcggcggcacggcgaggaagcggtacagaggggtgcggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctccgcttccgcggcagccgcgccaagctcaacttccccgagcacgccaccctcccaccgccgccgccgacgacgacggccgccgctcac
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| Protein seq | MCCTGDEVAGPGEQRRRPLDADAGGDEGAVATTSSSLFAAPMLSRRRQAEEMAAMVSALASVVAGGGGTSLPAKRPAEREPEEGAAVEGVWWSYCSELAAAAAAPSPAAPFPAGYVPSPGQHSPASAAAGDEEELPSPSSADSSGGGGGTARKRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNFPEHATLPPPPPTTTAAAH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0168100 | RBH | 0.0 | 0.000000 | 0.392320 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g07030 | RBH | 0.0 | 0.000000 | 0.095586 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0168100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0004530 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0004770 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0004760 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0004600 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0004760 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0058700 | RBH | 0.1344615 | 0.3062925 | 2.236102 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0004740 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0063100 | RBH | 1.0380065 | 2.6239585 | 0.1266445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0004530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0004790 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0004760 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0004700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0004670 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G004570 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004540 | RBH | 0.0 | 0.0 | 1.044420 |
