Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0004540 | OGI:11010040 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:3294200-3296644 | ||||||||
| Gene Symbol | ERF118, OsERF#118, OsERF118, AP2/EREBP#117, AP2/EREBP117 | ||||||||||
| DNA seq | ctaatttaacaaaattttaacttaagtaggagtacaaatcaagatgaatcaacgaacgtgtagagaatttccggcgggaaatttaaattggcaaaagacgtggcggtgctacagtggctacacgtggagagtggagatagtccaaactccaaacccatccttcgttcgcgcgctatctcgatgggtcccacggcggcggcgcaccccacccatagcccggccaagtcgccggcggcgaggagcccctcccaccgtcaccaccagcgccgccgctctccggcgggcgggcaaggttcgcttcgttgccgccaagctcatgtccagcgaagctgtagaacaacggaaacgacgactgccccgacgacgacgacgacgcgccggccgccgtcgacggccgaggcgagtcctccattatctgctcgaggaaatgcggcggttcgccggcgccctgcaagaacctggcgtactcggagtactcctcgccgacgccgaccatcccctgcgactgcggcggcgtcggcgccggcgcaggaggcggaggcggaggcggcaggagcgcggcgtcctcggggaagttgagcttggcgcggcagccgcggaagcggagggcggcgtcgtcgtaggcgcgcgcggcggcctcggcggtgtcgaaggtgccgagccacacgcgcgccgccttcaccgggtcgcggatctccgccgcccacttcccccacggccgctgccgcacgccgcggtaccgcttcctgccgccgccgccgccgccgccgccggcggcggcgtcgccggacgacggcgaggaggcctgctcgcgcggtgacgccaccgccgacgacgtcgccggcgcgtactgccctgccgccatggctgctgcgtgctctgcaaaatccaaccgaaacagagtactgaaggctatggtaaacgaaattagagatatattatgattcattttaaaaatagtcatttttttagatatttctaaatttatgttgaaattttgtcgtatctctagcttaggtggtgttttcaacattgttcgaggatgaaagctaatgttatacattataaacttaacaaataaattagaataggtgatctaaacaataaagtaaaaaagtattttgaaaaatcgtattctaaaaggacatggatcggagtaaataatctgcaacgataatctgacgaataagcagaataattaccatgtactactctatataaacaaccgacaaatgtttcctttagctcggctccctcTttttttttccaagatcttcaacatagtgttcaataaaattttactacaatgttttaccttttcttgagaaacacctagggatcttccggctaactccataaggtgatgggttagctggtctgggtttgaattctcaccctttctatttatttgatatcaggtcatttcctaatattcgtgtttttttccttttgaaaaacaaaggtagtttggtgtacatgcaggtgaccaaatggacccaatgggacagtgacaaaaggaacacacacgtgttctactcttgcaaggtgacgtgatcatattccactgttacttaatctgaaaaacgtttgtacctcaccgactatgatgcaactatgcgttctaatgataatcattaggcacatttggaatcattatccattctctaattgtttcttgctttgctaaccaccacgtccatccattatatatccatctaattactctctaccctctccacgtgacaaatgtgaagaactagattgataaacacgaggagaagcagacaatagctgaaaaaaaaacatcaaggcagaaatggagtacttaaaaaactattagtaagtcagcaaaagactatatataaaacaaaagaaatagttttcaaattgaaacgaggaatgcaagttagaaatgagtactggaaatccgaaactaccagatgaagttgctctgttctggatgagactagtAaaaaaaaacacacacactacttgggctaaactgctaagcacatgcaattaactttttacacgcaatgatgctaattaaactcaaaattaacacataataatactgccacgaaaagatctaattatctatccaagctaaatggcacacttcaattccttaccgtgagatgcaggggaagtagacggtggcagcggcgccgcgccgtacgccggcggccaccactcctccgcctcgccgccgccgccgccggcgaccaccctcgccagcgcggacaccatcacagacatctcccacgcctgtccatgcctcgacagcattcccgccgccgcctcctcctcttcttcctcgccgccggcgccggcgagccgcggcagtcgtggtcccggcgggctcgccaccttgccaccaccgcacatgaaatcacggccgccgccgccgtccgtacgtcgccggcgaccgagctacgtgacagc
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| CDS seq | atgtgcggtggtggcaaggtggcgagcccgccgggaccacgactgccgcggctcgccggcgccggcggcgaggaagaagaggaggaggcggcggcgggaatgctgtcgaggcatggacaggcgtgggagatgtctgtgatggtgtccgcgctggcgagggtggtcgccggcggcggcggcggcgaggcggaggagtggtggccgccggcgtacggcgcggcgccgctgccaccgtctacttcccctgcatctcacgagcacgcagcagccatggcggcagggcagtacgcgccggcgacgtcgtcggcggtggcgtcaccgcgcgagcaggcctcctcgccgtcgtccggcgacgccgccgccggcggcggcggcggcggcggcggcaggaagcggtaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctccgcttccgcggctgccgcgccaagctcaacttccccgaggacgccgcgctcctgccgcctccgcctccgcctcctgcgccggcgccgacgccgccgcagtcgcaggggatggtcggcgtcggcgaggagtactccgagtacgccaggttcttgcagggcgccggcgaaccgccgcatttcctcgagcagataatggaggactcgcctcggccgtcgacggcggccggcgcgtcgtcgtcgtcgtcggggcagtcgtcgtttccgttgttctacagcttcgctggacatgagcttggcggcaacgaagcgaaccttgcccgcccgccggagagcggcggcgctggtggtgacggtgggaggggctcctcgccgccggcgacttggccgggctatgggtggggtgcgccgccgccgtgggacccatcgagatag
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| Protein seq | MCGGGKVASPPGPRLPRLAGAGGEEEEEEAAAGMLSRHGQAWEMSVMVSALARVVAGGGGGEAEEWWPPAYGAAPLPPSTSPASHEHAAAMAAGQYAPATSSAVASPREQASSPSSGDAAAGGGGGGGGRKRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEAAARAYDDAALRFRGCRAKLNFPEDAALLPPPPPPPAPAPTPPQSQGMVGVGEEYSEYARFLQGAGEPPHFLEQIMEDSPRPSTAAGASSSSSGQSSFPLFYSFAGHELGGNEANLARPPESGGAGGDGGRGSSPPATWPGYGWGAPPPWDPSR |
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| Function | Ethylene-responsive transcription factor ERF114 [UniProtKB/Swiss-Prot:Q9FH54] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0004540 | OsNaBo_11g0004540.01 | Chr11 | 3294200 | 3296644 | - | NAM | ||
| CDS seq | atgtgcggtggtggcaaggtggcgagcccgccgggaccacgactgccgcggctcgccggcgccggcggcgaggaagaagaggaggaggcggcggcgggaatgctgtcgaggcatggacaggcgtgggagatgtctgtgatggtgtccgcgctggcgagggtggtcgccggcggcggcggcggcgaggcggaggagtggtggccgccggcgtacggcgcggcgccgctgccaccgtctacttcccctgcatctcacgagcacgcagcagccatggcggcagggcagtacgcgccggcgacgtcgtcggcggtggcgtcaccgcgcgagcaggcctcctcgccgtcgtccggcgacgccgccgccggcggcggcggcggcggcggcggcaggaagcggtaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctccgcttccgcggctgccgcgccaagctcaacttccccgaggacgccgcgctcctgccgcctccgcctccgcctcctgcgccggcgccgacgccgccgcagtcgcaggggatggtcggcgtcggcgaggagtactccgagtacgccaggttcttgcagggcgccggcgaaccgccgcatttcctcgagcagataatggaggactcgcctcggccgtcgacggcggccggcgcgtcgtcgtcgtcgtcggggcagtcgtcgtttccgttgttctacagcttcgctggacatgagcttggcggcaacgaagcgaaccttgcccgcccgccggagagcggcggcgctggtggtgacggtgggaggggctcctcgccgccggcgacttggccgggctatgggtggggtgcgccgccgccgtgggacccatcgagatag
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| Protein seq | MCGGGKVASPPGPRLPRLAGAGGEEEEEEAAAGMLSRHGQAWEMSVMVSALARVVAGGGGGEAEEWWPPAYGAAPLPPSTSPASHEHAAAMAAGQYAPATSSAVASPREQASSPSSGDAAAGGGGGGGGRKRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEAAARAYDDAALRFRGCRAKLNFPEDAALLPPPPPPPAPAPTPPQSQGMVGVGEEYSEYARFLQGAGEPPHFLEQIMEDSPRPSTAAGASSSSSGQSSFPLFYSFAGHELGGNEANLARPPESGGAGGDGGRGSSPPATWPGYGWGAPPPWDPSR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.044420 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0168500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g06770 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0168500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004630 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004680 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004630 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004580 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004480 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0057600 | RBH | 0.012465 | 0.023296 | 1.595355 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004560 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0058200 | RBH | 0.2975035 | 0.0116345 | 0.0380845 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004490 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004560 | RBH | 0.153795 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004560 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004530 | RBH | 0.0 | 0.0 | 0.194105 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004570 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004610 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0004770 | RBH | 0.0 | 0.0 | 0.0 |
