Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0024010 | OGI:11076310 | 8/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:29827572-29835713 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaccattttctctccccgTgtctgggctttttgatttcccaaacaacgttgggtctattaggatggagccttgcttcttctttccaaagatccataTtttccttaTtttgatcaccatctccttggCttagagtgatgtcttcaagctttttgagatccatattttccttattttgatcaccatctccttggcttagagtgatgtcttcaagaTttttgatgtgtttgactcctatgacgacggaaggattaggtagttgatttgattgcagatgaagtgagataagaaacttGAgagCtccatcttggatttctatcctgggtaaaTttggatagctcacaaggcatatctgcttcaggctacggaaatagtattgatcagatTCAcctttagattctatgacgagttcaacaaggTtatcatcaaCcagcttcaaatattccaaatatttcaatcctctcacgcctgtaataatggtatttCccgtcaaaccagtagacgaaatgcacAatttcttgataccacccagTttggaaacaaattgagggaaattctgtaggtgacctttcagcttcagggaggtaagttcaccgggagcttcatttgaaaaatccaggaaatctgttgagcagccttctttcaagtgaattgacagggaCcgatcaacaccatgcggcatagcactgctcccagtCccatcacgaatgaatttctggacggTttctgaaacatgagtcaagtttGttttgtCtgcagtggatttacaccatatcttaagctttctcaaccgagcaatcatatgaatcatcagccgtgatattcgtcggtgcttgCcgatgacAaatcctgctagcgtttgcaggttgcatccgtccgacagtttcttctttaggttCcacacttggaagcagtctgataTtaaaagttgcaacgctCcaaggaggtgttttaactcgggtagcttgtaaaatAattcaatgggcaccttcaccgtcatgttgggcccggggcagcatctccttaggtcgagtgtctgtaagcactccagcctcgctatttCcctcggaaCcttagtaatgctgcccccgaggctcaggtatttcagcagcagcagctggtcgcatattgctttcaagtgtttgttatttagaccatcgcActcctccagatccaacactcgcagaaacttgtaatcagcgaagttggccttcAaacccaccacggcaccaccttccTTcttgtcctTGgtagggaacacggccagagtccgaagatttggaaacttatcaGctcttgtaatattcctgtcgtctttgtaattgtgaacagtaagccggcggacatattcttcgggcggatcttcatgatagagccacTtttgcatgaattgttcggagttggactggtgcgaaatgtactcaagtatcatCCcagggagttggcACCGGTTCATGTTTTCGTTAATGTTactttctggaacaggttgaatgatattccggtcgatgagggcttcgagaatgcaattcaagtcgttgctacTtttatcatttgatgttataagtccttctgccatccaacgccttattagggagtccctcttgacaggatgaccacgtgggaacatgccgaaatacagcaaaaagtccttgataatatcactgtctaggttgtggtagctatagaacagcacccgttgcattcttcctaacgggccgtTgcattcatcatgacaaacgtcgcagctaagtgctttggcacatctattaCctgacgattcctgcctgacgtcttcagctatgctaacaagagcaagtggtaggccgtcacatctgCcaatgacTtttaatatcgtttcttcatccacaggtgaaagatcagtctgctgcattcgagctacttcacggaataaacttgtttggtcgtcgggactagtaagttttttcactttgtacaccttatgctcatcagatccactgtcacaatAagctaccgaccgaatagttgtcgtcgcgataattgtgctgtccacttccatgtcttcacgtaagacaTtacttataccttgcagcacggccctctcctgcacgtcatcgatcactattaagtacctgcaagtgataatttaagatcacaacgtgaatatagcactccactcgaaacaatggaactCaaaccatccactatatattactaaCtgatagtatattgcaattattccaatgctatttcactgaatgctaaGggcattcaaaatatggctaatgtgcatagcaatctccactactacaatagatgtttccacaggcggccAaaaaattattCccttcatctcAaatataagttAtactataTaattaccgacgcaaagataaaaaaaaaattattatcatcttctTGgttggataaccttaataaatataatgcatgcacccaaggaaattcgagaatttaatgaTggatgattgaaaaaagaatttaggagaagagaagatactagtagttaattaaattaattaaatgaatgcacgccatgtattatgAaacaatgAaaaaaaggatgtgccctatatgtaccttAaaattccTttacTttttcattgctatatatgttccaaacacaACatcccaccaaatgttgatgttttctaatcctctgtttcacatatataatcctatcttattcatgCgttttttctattcctatgttttttctaccctgtgttccaaaagaacccttatatattactactaacttcccgatccttcgTtaatgcagccacacattaacacaacAaccgTtctcattggctcctcaactaattagagttaatacctacttgagaaaatcgttcataattttcatttcaaaatTGaaaacttccatatcaaaattcAaaatctttcaattcagatttAaaaacttttaactcaatttttcAaaatcaattgttttatttatttattgaaaaaaatactgtagcacttagcgctaatcaccatgaTtagtgacggcgcgccctgactagcttgactgcattcttttgttcctgtgaaaacgtagaggggtaatagtaTtccctagaaaTcaagctagcaaatcctttgaaccgaagagatattaaatcctctatttttttCtccagtactccccattccaaaggaaccttaaaagtgcggtttggaatatgagaatgacaagtatttccgtatagaatttaaatcatatagaacgacaggtagcAaaacacttgtcttactgagctgcaatgcAttaataggttccAaaatataatctctctagaacaaattAatcagatgaactaaaagtggagCcttttcgcgacgaggagggcttgccattgtagctacagcattctttgttctactCcaagaaagtagaTtgacatgtgactttttagacattgatcgaTtggttaaatatgttattgataaaaggaaatcagtcatttgacaaatcaaatgtctacagaaGttttttgtgcatgcagaaattaacgagtaagaaagtagctagtcaccttccgacatgTttgacgcttgtagaggtactcgcgccaacaacgccaatatcgTtcattaCttctgaggtgtggttggatgtactcgcaatatctgtgtctgtgcccttgtaaaactcgcgtgctatctcgtgtgaTtcatcattcttcttgttcaaggcactaaatcaaaataccatgtatgttaatgcttattAagtgcgggagtatttccttgttaAGGatattagaaatagaacaaagtattatttgtaTtttttgtgtcctggcaagaccattctctctttcgctccgagaaaatAAattgacatgtggcattttagatcgaagctttcctgtactgcaaTtcaaattgatctggggattcaaagcatggtagtgttAgattttgtgctgaatatatataTcaggtcggttacaatttagaacttagattcgtaacaggtttaaggataatagtaaaatcAgactatgtcctaggctttatcTtaaatatagaggcacaatattgttataactgcatggtgacaaagcattggcaagaggaatgtgtgacctagaaggCcgaggTGggccttgggaCTcagtctaggtcagaccccgggctctcccGgtttgTtatcttaagatgtactCtctctgtttcagattataagacgttttgactttagtcaaagtcaaacaacttcaagtttgactaagtttatggacaaatatagTaatatttataataccaaattagtttcattaaatcaataaTtgaaTatattttcatgataaATttgtcttgggTtgaaaataTtgttATttttatctacaaatttagtcaaacttgaagcggTttgactttgaccaaagtcaaaacgtcttataacctgaaatggagggagtagaagggcaaggggagctctggaacccagtctaggtcaagttccaggctCctggcttgttattttacgatgtagatcgtgtaggtctctatactcctCccaaggaggaatgtgtgacctagaaaggcaaggagggtcctgggacccggtctaagtcaggtCctgggctctctgccttgctaaTttatagatctactaagttttagatgtagatttttGtataaactcctctaaaaggagggttgtaTttggaggggtgagagatacaaatatgcaggaactatggaaaagataaattgatgAaagatgtgttgcagttgcctcataaaatgctatctttcctggtgcagtggAaaaacttagcaacacagaagctggctagggaGttggagatcttgcaggcatcgctgcttgtcAatatccgcgagctGGgggggggcaggggaatgtgccAagagactcaagggAggcaccttcgtcgaactgatttagtttccatgtagtcccgttcagctttggatttatctttgttttcctagcttgttttggctgtgccagcagcaggggttatgtgaccctagtattcttatgtatcgctggtattcccagtttttttctgttgctgtAtgaactgagtatgcttttttatAaaaagctgggcattgcctttgtctAaaaaaaaggagggttgtataacacataagggcacggGAgcccccGggacccaaagtagggcGggtcccaagccccccccctccgtcctgacacgtggttatttttAattgcggctAaacaaggttttttttttatggaataagaatataattaacctcgagtccctaaggaaaGgggtaccttggttcctagttcaccaacaacatggtatatttggcaagtgaagtttgttagagtttgtgttgaatatgtttacAAAgtcggttaaattttagaacttagagttgtaataggttttaggatagtagtagagttgcactatgccctaggctctctcttaaatagataagagggaatggttgtcaGcagtgtctggcaaagggttgttgtaactttaatatgttgtAattatgttgtactccctctattcctagtttagtagtcgttgtaggaaagaaatgaaaaaaaatatggtgttgtaaaaatgaccaatgtgcccctgcattaatcattttaatgcttaaaatttgccacaaaattagtactgcgcctgccattctgatatgtctgcaacaagtatggagaagaaaaTtaataggagtactcctactaatggctagcctgctagtcgcctcacgcctaaacgaccttctttataggacaatgaccgtaccccaaacgacaactaaactaggatagagggactatttaggaggagcgttcataatcaatgctatggaAATattggttagggctgtacctcgttAataattatagtacctcggtatcatcatcagtttaagtcttctatggcattcttctatgtctagtTAtcgatacgttattggtgccggTtttataacatacttatacacaacattcgtttAttccgtcgttgtgtgcaaaatgcggatttaaatggtaggataggttcgtggtttccatttggAaatccatcttctctgccccctcttcatcagttgtaatactcTctctctctctctctatGgggaggaagaagcttttctagcttattgtcctttcacatggattactgATatatatgcccaagatccgtgggacccacatgtcagcaacttAaagttaggggacagtaacttagaggagctggttccgtggTttttatttggctatgaaaTtcaggtgaagagcctcTccccatgtgacatttttttttaaaaaaaaatagatcaaaaggaaaTCcggtgTttgagatttatAaagatgacgaagttagggcaagcaaaacgagAaaaccaTtagcacatgattaattgactcttaattattacaaacTtgaaaattgggtatgtttgatattttaaagcaactttTAtatttttgcatgAaatataccatttagcggtttaaaaagcgtgctaatggaaatcgatgaaatttgtatgttaatgagaaaagaacaccatcgtaTttttatgtacacaaaaaTtgattatgaaaataggaaaactaataattacctgttggtctcgacgaattgtggtgtccctgtgcaggcattcctgattgctattagtcctttgccggaggtgttgtcagcaagcatatgtatGtccTtgttgtgtacgtctttgttcatgacttgtgcgaggttgttggatgaactcgcaccgtctatgcctttccccttgccagcatactgcacacacagcgaacgagacaggaacaacatcagacgccacccaaatcaaacaatctagcttccgcagcagcaagtgcAaagaagacgaacagaaataagcaggacgcgaaccgtacccggatgaggtcggtctcgacgtactcctcctcgtcgccatcctcgtccGgcggctgctcctcttgcagtgcatcttccttcttcttcaagacactaaatcaaataccatgtatGctggagcttatcaagtggcagagtattttcttgttaaggatatatatagaacaaagtattatttccttgtttttcaaggaatggaacgatggttctgatggatgatgaatacacatgcttcccgagcaccaaaacggtgtgattttttttcttagagaactgtttccaatatattttttcagctttatagcattcatttgtttccaccatagaataattattaataatcatacacctattcaaccactaacacccaagtcccaagaacattgttacatttatcgaaaattgattgacatctgaatttttagaagtAaaaggagtaagtaaaatggtgatcgatagataatggggaaatatatacgtctctttactaaccgattgtccatagatatgcatgcagaaattaatgagcaatataAGaaagctattcacctgttAgcaccagataagccgttgcgtAatttgacacgtAactcgtcgatcacctgtcgtgcattcttgccggaggcactaacccaaGTgtgagggaactcgtctatcacctcactgactagggaagtcttacctatgccaccgaagcccacgatgcagatcaccctgagcttcctctccgattggccgtcggattgccgaagcagcgctcgaagctctttgacagcccccttgatccctaccatctcgtgatctgctttGggggcggtctcgtgagcagccggaggatctggcgcatcattcttcTtttctggTggattggagaagtacttcctgagcttttcgtgtttctcctctgattcgttcttgagttcacctatccttttgtcaagcaaatcacgggcttcTtttgtcttggcggcctggagctggtcgaagcagtcttcgaTtttatttgccaagtacctgagtggtaagctccattctttccggaagtttctactgtccttacggacaatcgagcgattctgttcaatgagacagccgattgccttAaactcatctcggatgaattgaacattgcccttaaggacctcaaactcttgcccagctcctaaccAatcaaggaaacgaggtaaatttacggtaataagcgcggagattaagggaccgagagcggcttccat
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| CDS seq | atggaagccgctctcggtcccttaatctccgcgcttattaccgtaaatttacctcgtttccttgatTggttaggagctgggcaagagtttgaggtccttaagggcaatgttcaattcatccgagatgagttTaaggcaatcggctgtctcattgaacagaatcgctcgattgtccgtaaggacagtagaaacttccggaaagaatggagcttaccactcaggtacttggcaaataaaAtcgaagactgcttcgaccagctccaggccgccaagacaaaAgaagcccgtgatttgcttgacaaaaggataggtgaactcaagaacgaatcagaggagaaacacgaaaagctcaggaagtacttctccaatccAccagaaaAgaagaatgatgcgccagatcctccggctgctcacgagaccgccccCaaagcagatcacgagatggtagggatcaagggggctgtcaaagagcttcgagcgctgcttcggcaatccgacggccaatcggagaggaagctcagggtgatctgcatcgtgggcttcggtggcataggtaagacttccctagtcagtgaggtgatagacgagttccctcacACttgggttagtgcctccggcaagaatgcacgacaggtgatcgacgagtTacgtgtcaaatTacgcaacggcttatctggtgcTaacagtgtcttgaagaagaaggaagatgcactgcaagaggagcagccgcCggacgaggatggcgacgaggaggagtacgtcgagaccgacctcatccggtatgctggcaaggggaaaggcatagacggtgcgagttcatccaacaacctcgcacaagtcatgaacaaagacgtacacaacaAggaCatacatatgcttgctgacaacacctccggcaaaggactaatagcaatcaggaatgcctgcacagggacaccacaattcgtcgagaccaacaggtacttaatagtgatcgatgacgtgcaggagagggccgtgctgcaaggtataagtaAtgtcttacgtgaagacatggaagtggacagcacaattatcgcgacgacaactattcggtcggtagctTattgtgacagtggatctgatgagcataaggtgtacaaagtgaaaaaacttactagtcccgacgaccaaacaagtttattccgtgaagtagctcgaatgcagcagactgatctttcacctgtggatgaagaaacgatattaaaAgtcattgGcagatgtgacggcctaccacttgctcttgttagcatagctgaagacgtcaggcaggaatcgtcagGtaatagatgtgccaaagcacttagctgcgacgtttgtcatgatgaatgcAacggcccgttaggaagaatgcaacgggtgctgttctatagctaccacaacctagacagtgatattatcaaggactttttgctgtatttcggcatgttcccacgtggtcatcctgtcaagagggactccctaataaggcgttggatggcagaaggacttataacatcaaatgataaaAgtagcaacgacttgaattgcattctcgaagccctcatcgaccggaatatcattcaacctgttccagaaagtAACATTAACGAAAACATGAACCGGTgccaactccctgGGatgatacttgagtacatttcgcaccagtccaactccgaacaattcatgcaaaAgtggctctatcatgaagatccgcccgaagaatatgtccgccggcttactgttcacaattacaaagacgacaggaatattacaagagCtgataagtttccaaatcttcggactctggccgtgttccctacCAaggacaagAAggaaggtggtgccgtggtgggttTgaaggccaacttcgctgattacaagtttctgcgagtgttggatctggaggagTgcgatggtctaaataacaaacacttgaaagcaatatgcgaccagctgctgctgctgaaatacctgagcctcgggggcagcattactaagGttccgaggGaaatagcgaggctggagtgcttacagacactcgacctaaggagatgctgccccgggcccaacatgacggtgaaggtgcccattgaatTattttacaagctacccgagttaaaacacctccttgGagcgttgcaacttttaAtatcagactgcttccaagtgtgGaacctaaagaagaaactgtcggacggatgcaacctgcaaacgctagcaggattTgtcatcgGcaagcaccgacgaatatcacggctgatgattcatatgattgctcggttgagaaagcttaagatatggtgtaaatccactgcaGacaaaaCaaacttgactcatgtttcagaaAccgtccagaaattcattcgtgatggGactgggagcagtgctatgccgcatggtgttgatcgGtccctgtcaattcacttgaaagaaggctgctcaacagatttcctggatttttcaaatgaagctcccggtgaacttacctccctgaagctgaaaggtcacctacagaatttccctcaatttgtttccaaActgggtggtatcaagaaatTgtgcatttcgtctactggtttgacggGaaataccattattacaggcgtgagaggattgaaatatttggaatatttgaagctgGttgatgataAccttgttgaactcgtcatagaatctaaaggTGAatctgatcaatactatttccgtagcctgaagcagatatgccttgtgagctatccaaAtttacccaggatagaaatccaagatggaGctcTCaagtttcttatctcacttcatctgcaatcaaatcaactacctaatccttccgtcgtcataggagtcaaacacatcaaaaAtcttgaagacatcactctaagccaaggagatggtgatcaaaataaggaaaatatggatctcaaaaagcttgaagacatcactctaaGccaaggagatggtgatcaaaAtaaggaaaAtatggatctttggaaagaagaagcaaggctccatcctaatagacccaacgttgtttgggaaatcaaaaagcccagacAcggggagagaaaatggtga
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| Protein seq | MEAALGPLISALITVNLPRFLDWLGAGQEFEVLKGNVQFIRDEFKAIGCLIEQNRSIVRKDSRNFRKEWSLPLRYLANKIEDCFDQLQAAKTKEARDLLDKRIGELKNESEEKHEKLRKYFSNPPEKKNDAPDPPAAHETAPKADHEMVGIKGAVKELRALLRQSDGQSERKLRVICIVGFGGIGKTSLVSEVIDEFPHTWVSASGKNARQVIDELRVKLRNGLSGANSVLKKKEDALQEEQPPDEDGDEEEYVETDLIRYAGKGKGIDGASSSNNLAQVMNKDVHNKDIHMLADNTSGKGLIAIRNACTGTPQFVETNRYLIVIDDVQERAVLQGISNVLREDMEVDSTIIATTTIRSVAYCDSGSDEHKVYKVKKLTSPDDQTSLFREVARMQQTDLSPVDEETILKVIGRCDGLPLALVSIAEDVRQESSGNRCAKALSCDVCHDECNGPLGRMQRVLFYSYHNLDSDIIKDFLLYFGMFPRGHPVKRDSLIRRWMAEGLITSNDKSSNDLNCILEALIDRNIIQPVPESNINENMNRCQLPGMILEYISHQSNSEQFMQKWLYHEDPPEEYVRRLTVHNYKDDRNITRADKFPNLRTLAVFPTKDKKEGGAVVGLKANFADYKFLRVLDLEECDGLNNKHLKAICDQLLLLKYLSLGGSITKVPREIARLECLQTLDLRRCCPGPNMTVKVPIELFYKLPELKHLLGALQLLISDCFQVWNLKKKLSDGCNLQTLAGFVIGKHRRISRLMIHMIARLRKLKIWCKSTADKTNLTHVSETVQKFIRDGTGSSAMPHGVDRSLSIHLKEGCSTDFLDFSNEAPGELTSLKLKGHLQNFPQFVSKLGGIKKLCISSTGLTGNTIITGVRGLKYLEYLKLVDDNLVELVIESKGESDQYYFRSLKQICLVSYPNLPRIEIQDGALKFLISLHLQSNQLPNPSVVIGVKHIKNLEDITLSQGDGDQNKENMDLKKLEDITLSQGDGDQNKENMDLWKEEARLHPNRPNVVWEIKKPRHGERKW |
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| Function | Disease resistance protein RGA4 [UniProtKB/Swiss-Prot:F7J0M6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0024010 | OsNaBo_11g0024010.01 | Chr11 | 29827572 | 29835713 | - | NAM | ||
| CDS seq | atggaagccgctctcggtcccttaatctccgcgcttattaccgtaaatttacctcgtttccttgatTggttaggagctgggcaagagtttgaggtccttaagggcaatgttcaattcatccgagatgagttTaaggcaatcggctgtctcattgaacagaatcgctcgattgtccgtaaggacagtagaaacttccggaaagaatggagcttaccactcaggtacttggcaaataaaAtcgaagactgcttcgaccagctccaggccgccaagacaaaAgaagcccgtgatttgcttgacaaaaggataggtgaactcaagaacgaatcagaggagaaacacgaaaagctcaggaagtacttctccaatccAccagaaaAgaagaatgatgcgccagatcctccggctgctcacgagaccgccccCaaagcagatcacgagatggtagggatcaagggggctgtcaaagagcttcgagcgctgcttcggcaatccgacggccaatcggagaggaagctcagggtgatctgcatcgtgggcttcggtggcataggtaagacttccctagtcagtgaggtgatagacgagttccctcacACttgggttagtgcctccggcaagaatgcacgacaggtgatcgacgagtTacgtgtcaaatTacgcaacggcttatctggtgcTaacagtgtcttgaagaagaaggaagatgcactgcaagaggagcagccgcCggacgaggatggcgacgaggaggagtacgtcgagaccgacctcatccggtatgctggcaaggggaaaggcatagacggtgcgagttcatccaacaacctcgcacaagtcatgaacaaagacgtacacaacaAggaCatacatatgcttgctgacaacacctccggcaaaggactaatagcaatcaggaatgcctgcacagggacaccacaattcgtcgagaccaacaggtacttaatagtgatcgatgacgtgcaggagagggccgtgctgcaaggtataagtaAtgtcttacgtgaagacatggaagtggacagcacaattatcgcgacgacaactattcggtcggtagctTattgtgacagtggatctgatgagcataaggtgtacaaagtgaaaaaacttactagtcccgacgaccaaacaagtttattccgtgaagtagctcgaatgcagcagactgatctttcacctgtggatgaagaaacgatattaaaAgtcattgGcagatgtgacggcctaccacttgctcttgttagcatagctgaagacgtcaggcaggaatcgtcagGtaatagatgtgccaaagcacttagctgcgacgtttgtcatgatgaatgcAacggcccgttaggaagaatgcaacgggtgctgttctatagctaccacaacctagacagtgatattatcaaggactttttgctgtatttcggcatgttcccacgtggtcatcctgtcaagagggactccctaataaggcgttggatggcagaaggacttataacatcaaatgataaaAgtagcaacgacttgaattgcattctcgaagccctcatcgaccggaatatcattcaacctgttccagaaagtAACATTAACGAAAACATGAACCGGTgccaactccctgGGatgatacttgagtacatttcgcaccagtccaactccgaacaattcatgcaaaAgtggctctatcatgaagatccgcccgaagaatatgtccgccggcttactgttcacaattacaaagacgacaggaatattacaagagCtgataagtttccaaatcttcggactctggccgtgttccctacCAaggacaagAAggaaggtggtgccgtggtgggttTgaaggccaacttcgctgattacaagtttctgcgagtgttggatctggaggagTgcgatggtctaaataacaaacacttgaaagcaatatgcgaccagctgctgctgctgaaatacctgagcctcgggggcagcattactaagGttccgaggGaaatagcgaggctggagtgcttacagacactcgacctaaggagatgctgccccgggcccaacatgacggtgaaggtgcccattgaatTattttacaagctacccgagttaaaacacctccttgGagcgttgcaacttttaAtatcagactgcttccaagtgtgGaacctaaagaagaaactgtcggacggatgcaacctgcaaacgctagcaggattTgtcatcgGcaagcaccgacgaatatcacggctgatgattcatatgattgctcggttgagaaagcttaagatatggtgtaaatccactgcaGacaaaaCaaacttgactcatgtttcagaaAccgtccagaaattcattcgtgatggGactgggagcagtgctatgccgcatggtgttgatcgGtccctgtcaattcacttgaaagaaggctgctcaacagatttcctggatttttcaaatgaagctcccggtgaacttacctccctgaagctgaaaggtcacctacagaatttccctcaatttgtttccaaActgggtggtatcaagaaatTgtgcatttcgtctactggtttgacggGaaataccattattacaggcgtgagaggattgaaatatttggaatatttgaagctgGttgatgataAccttgttgaactcgtcatagaatctaaaggTGAatctgatcaatactatttccgtagcctgaagcagatatgccttgtgagctatccaaAtttacccaggatagaaatccaagatggaGctcTCaagtttcttatctcacttcatctgcaatcaaatcaactacctaatccttccgtcgtcataggagtcaaacacatcaaaaAtcttgaagacatcactctaagccaaggagatggtgatcaaaataaggaaaatatggatctcaaaaagcttgaagacatcactctaaGccaaggagatggtgatcaaaAtaaggaaaAtatggatctttggaaagaagaagcaaggctccatcctaatagacccaacgttgtttgggaaatcaaaaagcccagacAcggggagagaaaatggtga
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| Protein seq | MEAALGPLISALITVNLPRFLDWLGAGQEFEVLKGNVQFIRDEFKAIGCLIEQNRSIVRKDSRNFRKEWSLPLRYLANKIEDCFDQLQAAKTKEARDLLDKRIGELKNESEEKHEKLRKYFSNPPEKKNDAPDPPAAHETAPKADHEMVGIKGAVKELRALLRQSDGQSERKLRVICIVGFGGIGKTSLVSEVIDEFPHTWVSASGKNARQVIDELRVKLRNGLSGANSVLKKKEDALQEEQPPDEDGDEEEYVETDLIRYAGKGKGIDGASSSNNLAQVMNKDVHNKDIHMLADNTSGKGLIAIRNACTGTPQFVETNRYLIVIDDVQERAVLQGISNVLREDMEVDSTIIATTTIRSVAYCDSGSDEHKVYKVKKLTSPDDQTSLFREVARMQQTDLSPVDEETILKVIGRCDGLPLALVSIAEDVRQESSGNRCAKALSCDVCHDECNGPLGRMQRVLFYSYHNLDSDIIKDFLLYFGMFPRGHPVKRDSLIRRWMAEGLITSNDKSSNDLNCILEALIDRNIIQPVPESNINENMNRCQLPGMILEYISHQSNSEQFMQKWLYHEDPPEEYVRRLTVHNYKDDRNITRADKFPNLRTLAVFPTKDKKEGGAVVGLKANFADYKFLRVLDLEECDGLNNKHLKAICDQLLLLKYLSLGGSITKVPREIARLECLQTLDLRRCCPGPNMTVKVPIELFYKLPELKHLLGALQLLISDCFQVWNLKKKLSDGCNLQTLAGFVIGKHRRISRLMIHMIARLRKLKIWCKSTADKTNLTHVSETVQKFIRDGTGSSAMPHGVDRSLSIHLKEGCSTDFLDFSNEAPGELTSLKLKGHLQNFPQFVSKLGGIKKLCISSTGLTGNTIITGVRGLKYLEYLKLVDDNLVELVIESKGESDQYYFRSLKQICLVSYPNLPRIEIQDGALKFLISLHLQSNQLPNPSVVIGVKHIKNLEDITLSQGDGDQNKENMDLKKLEDITLSQGDGDQNKENMDLWKEEARLHPNRPNVVWEIKKPRHGERKW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.154854 | 1.279532 | 1.446894 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0684700 | SBH | 1.002620 | 0.297249 | 0.828518 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45980 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0684700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024280 | SBH | 0.259908 | 9.612663 | 1.746912 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023040 | SBH | 0.094114 | 2.121328 | 0.989674 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0020220 | SBH | 0.419872 | 7.487573 | 1.379724 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023720 | SBH | 0.025616 | 0.012910 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0427100 | RBH | 2.035931 | 38.275218 | 0.105318 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024460 | SBH | 0.000000 | 0.055119 | 0.105740 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0435000 | RBH | 0.2280535 | 0 | 0.0036375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023990 | RBH | 0.593243 | 0.169584 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023970 | RBH | 0.307051 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023750 | SBH | 2.453158 | 14.942351 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022600 | SBH | 0.482263 | 0.0 | 0.170905 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0020130 | SBH | 0.056184 | 5.394116 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022850 | SBH | 0.429413 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0016840 | SBH | 0.079447 | 1.142222 | 0.261122 |
