Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0014430 | OGI:11051580 | 3/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:19103204-19106233 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttacaacaaaaatatacctccttcttcacgaacaatgagagtctgtagctgcagccttgggagcaagctgtgaacagggagctttgggcatccccacagcttgagctccacaagggaagtgaggccacccagtccgtcacagtactgcagatcattgcagcttaagtgcagcttcctaagcgaaggaaggtgccgtggctccaaaggaatgcatgtggtgtgataccttatgattcttaagcactccagcgatgggaggggattcagcagtagatcatctgaagaatgaccaccccaaatgtgtagtatacgcagtttaggcaatgcatgaatggtgatacaagagcaatcatgaagttctaaagttttcaagtacatcaagggtggaagagacctcagacgtctggcgctgcatatttttagagtatgcaagcgtggaaagtcaccgtcaccaactccagaccactctgaccacttgggcatctcagtgaatgtcaactgtgtcaatgaagggaatccattaacatcaggatcatggctgcaaaactccctaccagtgcggtccaaacgccacatgccatagaaacggagagacaccaggaatggaagactaccaagtgttggaaggtgctctatgtaacaattattgagctcaatttcagtcaagttgacaaaagaagcttcacctaaccaacaggggaacataggactaccataatcatatattatcaattttctgaggctatgatttggtcgcaagctctcaagtagctgcatgtgttggatacgatttggactatcaccatcaaatgaaatatcgtcctcttcacagaaagaaaaatccaagtgtagtaactgtagggtttttttactatgtagaggagcatcgtttacatcatcgacgttcaacttaactctaaatccatctatcttcaactctctgatctcattcaagttcaacaggtctgtcatgcaatcatttcccaaatcaatcggaggcaaagtatgcaggttaattaggtgcccaattccatgtagcccatcatcatgctccctgcctggctcgtagagcagaccattcgggggatatggactgagccttgcgaatttcaaatggcgcaataattttatccttgccattaaggatggaaattccagccctaggcaattctggtctaacaccagggcccgcaacctctcacagttagaaaacaatgcttccggattattaatgttcacccttgcatcaggcaacactatgatagccctcagagatagtggggcaactgaaatttcacccgatgcaccatcttggatcgataagtatctaacattttgcggaatgttgatggacgtatcactacctagtgtaaagaactcatcctcagaaaggaagcatgcaagatcatgaataagatcatgcatgacatatgcaccatcttcattaaaaatatcagaatcatcttgaagaaatgaccgctcaaccaattcattgagatatctacttccagtttcatcctgattatgatatccatcacttggaaggagatcaagtactttccacaactgaagcacctcaggtatatcaaacacataatcctttggatataaagaaagggcaacaaaacatcgtttcaggtatataggcatgtgggtgtagctcaattgcaaggatggcaaaacctcattccttggatgctccaattcccAaagctcactttctagtacatctctccatctctgttcatttgtttcccaccgcagcatgctgcctagtgtcttaatcactaaaggcaggccattacacttttgaactatagcctttccaatctctaccaagtgtgatggaccattttcttggtcaacagtaaaagcaacttgcttgaacaatgaccagctctcatcaaaatttaggcagtttaggttgtagaaattagggtttgtctgcacaagccttgcaactctctcactgcgggtggttactactattttgcaaagctttgtcttcatcattggtgtgcacaacatttcccagcattctctctgatcattccatacgtcgtccaacacaagcaaaaccttctttcccgttattgcatcttccagtttcttctgaagaatatcaactgataataaatcacacttctccatctttagtgaactaatgatgccctgtgttatctttctaacatcaaagttctccgatacacaaacccatccatgcatatcaaacgattcccgcaccattgagtcattgtatacaagctgtgctagtgttgtcttgcccactccacccataccaacaatagccagcacagatatcggactaattacactgtcaccttctccacgaaacaatttttcaataatggtgttcttctcgttctctcttcccagaattcttggtgcaaatactacagagctagtctcccggtgagtactaatattactaatatcatgcagcctgactccatcattgactgataaagtaaagttagagtgatattccacgagctgatcaaatctctctaaaagcctccttgtttgaaaagccaatgcagttggtacaggtaccataccagcatcaataggaaagcccttattttcctttaactttgaacataaggaaaattgtaaagtcactatgtattctcatttccccttatttgcatcatggataaactaaaaagagagcatggtgttatttacctgttggagtctacagcggttcacctcgtactcgtactcctccaccacgtcctcggcgtcgtacgctaattccttgagctccttgagccgtagcttggtggactcctcacggatgtcccaatgctgctctgcatcatgcagcgtagcatggatccggcgcatggtattttccagcatccggaggttttccagatcctgatcctgtccctgcctcaccctaggagccatcgaagaggacggcgcccataggcttgctggtaggaaggaggagagtgtgtccaatgccttcctgatggcaagagaggcaaacaatccggccat
More
|
||||||||||
| CDS seq | atggccggattgtttgcctctcttgccatcaggaaggcattggacacactctcctccttcctaccagcaagcctatgggcgccgtcctcttcgatggctcctagggtgaggcagggacaggatcaggatctggaaaacctccggatgctggaaaataccatgcgccggatccatgctacgctgcatgatgcagagcagcattgggacatccgtgaggagtccaccaagctacggctcaaggagctcaaggaattagcgtacgacgccgaggacgtggtggaggagtacgagtacgaggtgaaccgctgtagactccaacagttaaaggaaaataagggctttcctattgatgctggtatggtacctgtaccaactgcattggcttttcaaacaaggaggcttttagagagatttgatcagctcgtggaatatcactctaactttactttatcagtcaatgatggagtcaggctgcatgatattagtaatattagtactcaccgggagactagctctgtagtatttgcaccaagaattctgggaagagagaacgagaagaacaccattattgaaaaattgtttcgtggagaaggtgacagtgtaattagtccgatatctgtgctggctattgttggtatgggtggagtgggcaagacaacactagcacagcttgtatacaatgactcaatggtgcgggaatcgtttgatatgcatggatgggtttgtgtatcggagaactttgatgttagaaagataacacagggcatcattagttcactaaagatggagaagtgtgatttattatcagttgatattcttcagaagaaactggaagatgcaataacgggaaagaaggttttgcttgtgttggacgacgtatggaatgatcagagagaatgctgggaaatgttgtgcacaccaatgatgaagacaaagctttgcaaaatagtagtaaccacccgcagtgagagagttgcaaggcttgtgcagacaaaccctaatttctacaacctaaactgcctaaattttgatgagagctggtcattgttcaagcaagttgcttttactgttgaccaagaaaatggtccatcacacttggtagagattggaaaggctatagttcaaaagtgtaatggcctgcctttagtgattaagacactaggcagcatgctgcggtgggaaacaaatgaacagagatggagagatgtactagaaagtgagcttTgggaattggagcatccaaggaatgaggttttgccatccttgcaattgagctacacccacatgcctatatacctgaaacgatgttttgttgccctttctttatatccaaaggattatgtgtttgatatacctgaggtgcttcagttgtggaaagtacttgatctccttccaagtgatggatatcataatcaggatgaaactggaagtagatatctcaatgaattggttgagcggtcatttcttcaagatgattctgatatttttaatgaagatggtgcatatgtcatgcatgatcttattcatgatcttgcatgcttcctttctgaggatgagttctttacactaggtagtgatacgtccatcaacattccgcaaaatgttagatacttatcgatccaagatggtgcatcgggtgaaatttcagttgccccactatctctgagggctatcatagtgttgcctgatgcaagggtgaacattaataatccggaagcattgttttctaactgtgagaggttgcgggccctggtgttagaccagaattgcctagggctggaatttccatccttaatggcaaggataaaattattgcgccatttgaaattcgcaaggctcagtccatatcccccgaatggtctgctctacgagccaggcagggagcatgatgatgggctacatggaattgggcacctaattaacctgcatactttgcctccgattgatttgggaaatgattgcatgacagacctgttgaacttgaatgagatcagagagttgaagatagatggatttagagttaagttgaacgtcgatgatgtaaacgatgctcctctacatagtaaaaaaaccctacagttactacacttggatttttctttctgtgaagaggacgatatttcatttgatggtgatagtccaaatcgtatccaacacatgcagctacttgagagcttgcgaccaaatcatagcctcagaaaattgataatatatgattatggtagtcctatgttcccctgttggttaggtgaagcttcttttgtcaacttgactgaaattgagctcaataattgttacatagagcaccttccaacacttggtagtcttccattcctggtgtctctccgtttctatggcatgtggcgtttggaccgcactggtagggagttttgcagccatgatcctgatgttaatggattcccttcattgacacagttgacattcactgagatgcccaagtggtcagagtggtctggagttggtgacggtgactttccacgcttgcatactctaaaaatatgcagcgccagacgtctgaggtctcttccacccttgatgtacttgaaaactttagaacttcatgattgctcttgtatcaccattcatgcattgcctaaactgcgtatactacacatttggggtggtcattcttcagatgatctactgctgaatcccctcccatcgctggagtgcttaagaatcataaggtatcacaccacatgcattcctttggagccacggcaccttccttcgcttaggaagctgcacttaagctgcaatgatctgcagtactgtgacggactgggtggcctcacttcccttgtggagctcaagctgtggggatgcccaaagctccctgttcacagcttgctcccaaggctgcagctacagactctcattgttcgtgaagaaggaggtatatttttgttgtaa
More
|
||||||||||
| Protein seq | MAGLFASLAIRKALDTLSSFLPASLWAPSSSMAPRVRQGQDQDLENLRMLENTMRRIHATLHDAEQHWDIREESTKLRLKELKELAYDAEDVVEEYEYEVNRCRLQQLKENKGFPIDAGMVPVPTALAFQTRRLLERFDQLVEYHSNFTLSVNDGVRLHDISNISTHRETSSVVFAPRILGRENEKNTIIEKLFRGEGDSVISPISVLAIVGMGGVGKTTLAQLVYNDSMVRESFDMHGWVCVSENFDVRKITQGIISSLKMEKCDLLSVDILQKKLEDAITGKKVLLVLDDVWNDQRECWEMLCTPMMKTKLCKIVVTTRSERVARLVQTNPNFYNLNCLNFDESWSLFKQVAFTVDQENGPSHLVEIGKAIVQKCNGLPLVIKTLGSMLRWETNEQRWRDVLESELWELEHPRNEVLPSLQLSYTHMPIYLKRCFVALSLYPKDYVFDIPEVLQLWKVLDLLPSDGYHNQDETGSRYLNELVERSFLQDDSDIFNEDGAYVMHDLIHDLACFLSEDEFFTLGSDTSINIPQNVRYLSIQDGASGEISVAPLSLRAIIVLPDARVNINNPEALFSNCERLRALVLDQNCLGLEFPSLMARIKLLRHLKFARLSPYPPNGLLYEPGREHDDGLHGIGHLINLHTLPPIDLGNDCMTDLLNLNEIRELKIDGFRVKLNVDDVNDAPLHSKKTLQLLHLDFSFCEEDDISFDGDSPNRIQHMQLLESLRPNHSLRKLIIYDYGSPMFPCWLGEASFVNLTEIELNNCYIEHLPTLGSLPFLVSLRFYGMWRLDRTGREFCSHDPDVNGFPSLTQLTFTEMPKWSEWSGVGDGDFPRLHTLKICSARRLRSLPPLMYLKTLELHDCSCITIHALPKLRILHIWGGHSSDDLLLNPLPSLECLRIIRYHTTCIPLEPRHLPSLRKLHLSCNDLQYCDGLGGLTSLVELKLWGCPKLPVHSLLPRLQLQTLIVREEGGIFLL |
||||||||||
| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0014430 | OsNaBo_11g0014430.01 | Chr11 | 19103204 | 19106233 | - | NAM | ||
| CDS seq | atggccggattgtttgcctctcttgccatcaggaaggcattggacacactctcctccttcctaccagcaagcctatgggcgccgtcctcttcgatggctcctagggtgaggcagggacaggatcaggatctggaaaacctccggatgctggaaaataccatgcgccggatccatgctacgctgcatgatgcagagcagcattgggacatccgtgaggagtccaccaagctacggctcaaggagctcaaggaattagcgtacgacgccgaggacgtggtggaggagtacgagtacgaggtgaaccgctgtagactccaacagttaaaggaaaataagggctttcctattgatgctggtatggtacctgtaccaactgcattggcttttcaaacaaggaggcttttagagagatttgatcagctcgtggaatatcactctaactttactttatcagtcaatgatggagtcaggctgcatgatattagtaatattagtactcaccgggagactagctctgtagtatttgcaccaagaattctgggaagagagaacgagaagaacaccattattgaaaaattgtttcgtggagaaggtgacagtgtaattagtccgatatctgtgctggctattgttggtatgggtggagtgggcaagacaacactagcacagcttgtatacaatgactcaatggtgcgggaatcgtttgatatgcatggatgggtttgtgtatcggagaactttgatgttagaaagataacacagggcatcattagttcactaaagatggagaagtgtgatttattatcagttgatattcttcagaagaaactggaagatgcaataacgggaaagaaggttttgcttgtgttggacgacgtatggaatgatcagagagaatgctgggaaatgttgtgcacaccaatgatgaagacaaagctttgcaaaatagtagtaaccacccgcagtgagagagttgcaaggcttgtgcagacaaaccctaatttctacaacctaaactgcctaaattttgatgagagctggtcattgttcaagcaagttgcttttactgttgaccaagaaaatggtccatcacacttggtagagattggaaaggctatagttcaaaagtgtaatggcctgcctttagtgattaagacactaggcagcatgctgcggtgggaaacaaatgaacagagatggagagatgtactagaaagtgagcttTgggaattggagcatccaaggaatgaggttttgccatccttgcaattgagctacacccacatgcctatatacctgaaacgatgttttgttgccctttctttatatccaaaggattatgtgtttgatatacctgaggtgcttcagttgtggaaagtacttgatctccttccaagtgatggatatcataatcaggatgaaactggaagtagatatctcaatgaattggttgagcggtcatttcttcaagatgattctgatatttttaatgaagatggtgcatatgtcatgcatgatcttattcatgatcttgcatgcttcctttctgaggatgagttctttacactaggtagtgatacgtccatcaacattccgcaaaatgttagatacttatcgatccaagatggtgcatcgggtgaaatttcagttgccccactatctctgagggctatcatagtgttgcctgatgcaagggtgaacattaataatccggaagcattgttttctaactgtgagaggttgcgggccctggtgttagaccagaattgcctagggctggaatttccatccttaatggcaaggataaaattattgcgccatttgaaattcgcaaggctcagtccatatcccccgaatggtctgctctacgagccaggcagggagcatgatgatgggctacatggaattgggcacctaattaacctgcatactttgcctccgattgatttgggaaatgattgcatgacagacctgttgaacttgaatgagatcagagagttgaagatagatggatttagagttaagttgaacgtcgatgatgtaaacgatgctcctctacatagtaaaaaaaccctacagttactacacttggatttttctttctgtgaagaggacgatatttcatttgatggtgatagtccaaatcgtatccaacacatgcagctacttgagagcttgcgaccaaatcatagcctcagaaaattgataatatatgattatggtagtcctatgttcccctgttggttaggtgaagcttcttttgtcaacttgactgaaattgagctcaataattgttacatagagcaccttccaacacttggtagtcttccattcctggtgtctctccgtttctatggcatgtggcgtttggaccgcactggtagggagttttgcagccatgatcctgatgttaatggattcccttcattgacacagttgacattcactgagatgcccaagtggtcagagtggtctggagttggtgacggtgactttccacgcttgcatactctaaaaatatgcagcgccagacgtctgaggtctcttccacccttgatgtacttgaaaactttagaacttcatgattgctcttgtatcaccattcatgcattgcctaaactgcgtatactacacatttggggtggtcattcttcagatgatctactgctgaatcccctcccatcgctggagtgcttaagaatcataaggtatcacaccacatgcattcctttggagccacggcaccttccttcgcttaggaagctgcacttaagctgcaatgatctgcagtactgtgacggactgggtggcctcacttcccttgtggagctcaagctgtggggatgcccaaagctccctgttcacagcttgctcccaaggctgcagctacagactctcattgttcgtgaagaaggaggtatatttttgttgtaa
More
|
|||||||
| Protein seq | MAGLFASLAIRKALDTLSSFLPASLWAPSSSMAPRVRQGQDQDLENLRMLENTMRRIHATLHDAEQHWDIREESTKLRLKELKELAYDAEDVVEEYEYEVNRCRLQQLKENKGFPIDAGMVPVPTALAFQTRRLLERFDQLVEYHSNFTLSVNDGVRLHDISNISTHRETSSVVFAPRILGRENEKNTIIEKLFRGEGDSVISPISVLAIVGMGGVGKTTLAQLVYNDSMVRESFDMHGWVCVSENFDVRKITQGIISSLKMEKCDLLSVDILQKKLEDAITGKKVLLVLDDVWNDQRECWEMLCTPMMKTKLCKIVVTTRSERVARLVQTNPNFYNLNCLNFDESWSLFKQVAFTVDQENGPSHLVEIGKAIVQKCNGLPLVIKTLGSMLRWETNEQRWRDVLESELWELEHPRNEVLPSLQLSYTHMPIYLKRCFVALSLYPKDYVFDIPEVLQLWKVLDLLPSDGYHNQDETGSRYLNELVERSFLQDDSDIFNEDGAYVMHDLIHDLACFLSEDEFFTLGSDTSINIPQNVRYLSIQDGASGEISVAPLSLRAIIVLPDARVNINNPEALFSNCERLRALVLDQNCLGLEFPSLMARIKLLRHLKFARLSPYPPNGLLYEPGREHDDGLHGIGHLINLHTLPPIDLGNDCMTDLLNLNEIRELKIDGFRVKLNVDDVNDAPLHSKKTLQLLHLDFSFCEEDDISFDGDSPNRIQHMQLLESLRPNHSLRKLIIYDYGSPMFPCWLGEASFVNLTEIELNNCYIEHLPTLGSLPFLVSLRFYGMWRLDRTGREFCSHDPDVNGFPSLTQLTFTEMPKWSEWSGVGDGDFPRLHTLKICSARRLRSLPPLMYLKTLELHDCSCITIHALPKLRILHIWGGHSSDDLLLNPLPSLECLRIIRYHTTCIPLEPRHLPSLRKLHLSCNDLQYCDGLGGLTSLVELKLWGCPKLPVHSLLPRLQLQTLIVREEGGIFLL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 20.919231 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0493100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g30110 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0493100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014560 | SBH | 0.0 | 14.574969 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0014520 | SBH | 0.0 | 0.730674 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0014450 | SBH | 0.0 | 1.391383 | 0.505034 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014240 | SBH | 0.0 | 0.263177 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0014510 | SBH | 0.0 | 1.082820 | 1.023822 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0273000 | SBH | 0.180791 | 9.692956 | 0.2507565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0014810 | SBH | 0.0 | 0.204951 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0286500 | SBH | 0.480209 | 12.379383 | 0.6080375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0014710 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014730 | SBH | 0.384812 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014330 | SBH | 0.0 | 15.428655 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014180 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0014400 | RBH | 0.0 | 8.395931 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014200 | RBH | 0.0 | 8.267348 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0014570 | SBH | 0.0 | 4.281900 | 0.0 |
