Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0006830 | OGI:11017320 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:5495704-5496062 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctaaattctgtacttgaaaagacgacgagaaatatagaacgcaggcaaaaagttagcagatatatagcttttcaggacacatacgatttctttcacatgagagatctttctgttatcatctaattggaaccaccgctttaatttagggcagcctgacattgatatatatattcaagcttacagagtttttctataccctcaggcaaggactcaatgtcatcgcaaaagctgatattaagtttcttgagagaggtgaggcaccccatgctctctggcaaatacttcaggtctgggcaggacaagatctccaatttttggagagagacgaggtctcccacccattgtggtagctttgtcat |
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| CDS seq | atgacaaagctaccacaatgggtgggagacctcgtctctctccaaaaattggagatcttgtcctgcccagacctgaagtatttgccagagagcatggggtgcctcacctctctcaagaaacttaatatcagcttttgcgatgacattgagtccttgcctgagggctgccctaaattaaagcggtggttccaattagatgataacagaaagatctctcatgtgaaagaaatcgtatgtgtcctgaaaagctatatatctgctaactttttgcctgcgttctatatttctcgtcgtcttttcaagtacagaatttag |
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| Protein seq | MTKLPQWVGDLVSLQKLEILSCPDLKYLPESMGCLTSLKKLNISFCDDIESLPEGCPKLKRWFQLDDNRKISHVKEIVCVLKSYISANFLPAFYISRRLFKYRI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0006830 | OsNaBo_11g0006830.01 | Chr11 | 5495704 | 5496062 | - | NAM | ||
| CDS seq | atgacaaagctaccacaatgggtgggagacctcgtctctctccaaaaattggagatcttgtcctgcccagacctgaagtatttgccagagagcatggggtgcctcacctctctcaagaaacttaatatcagcttttgcgatgacattgagtccttgcctgagggctgccctaaattaaagcggtggttccaattagatgataacagaaagatctctcatgtgaaagaaatcgtatgtgtcctgaaaagctatatatctgctaactttttgcctgcgttctatatttctcgtcgtcttttcaagtacagaatttag
More
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| Protein seq | MTKLPQWVGDLVSLQKLEILSCPDLKYLPESMGCLTSLKKLNISFCDDIESLPEGCPKLKRWFQLDDNRKISHVKEIVCVLKSYISANFLPAFYISRRLFKYRI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0212000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10610 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0212000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007100 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007080 | SBH | 0.030859 | 0.135391 | 0.760307 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006990 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007010 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0045370 | SBH | 3.504380 | 25.119926 | 12.713538 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0092600 | SBH | 2.596614 | 18.283927 | 14.3694515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0044910 | SBH | 0.162485 | 0.579616 | 1.814602 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0092900 | SBH | 0.0229945 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007130 | SBH | 0.132661 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0045280 | SBH | 0.645667 | 21.360731 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006970 | SBH | 1.186617 | 7.702504 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0064210 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007110 | SBH | 0.280194 | 5.345597 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007010 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006980 | RBH | 2.311887 | 23.393421 | 5.859730 |
