Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0006580 | OGI:11016550 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:5226022-5229915 | ||||||||
| Gene Symbol | OsFbox587, Os_F0097 | ||||||||||
| DNA seq | ccgcggcggcgcacgccacctgttcgacggaaagccccgccgacgaggaagagcccggccgccaccacatggcgagcggggcggaccgcatcagcgacctcccggacgacgtcatccaccacgtcctctccctcctgccgtcgcgggacgcggtgcggacctgcgcgctcgcccgccgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgacagggggtgggccagcttcgacgcgctcgcccgcttcgtcgacagcctgctccgcctccgccgcggcggcgcggcgctggacgcctgcgacttcgacctcagattcgacggcgccttccccggcgaggagctgcagggcgacacctggatccgccgcgcccttcgccgccaggtccgggcgctccggttcgccgtctccacccaCccccgggtgcccatccctctctcggactcgcccctcgtctcccacagcctcacaaccctagagctgaggggtgtccagggaaacgaccaggttcttgatttctcgagctgtccttcgctggtggatctcaagatgaaggattgctacgttggtggcctggaaatgtggtctccatcgttgaagcatctgagcataacatactgcgtcttctactgcgactatcgcaccaggatggatttccctagccttgtcaccttcaagttcaacacaaataccgggaggactccgttgctcgagacgatgccttcgttggcaaccgcggcggttaggcttgatcatttctgtcatgaccgatgcgcaaatggttggtacgatgattgcggggatgctggttgtaagggttgtcatgattattataggcctgatgaatacgactgcgtgtttctcgaaggcttgacggaagctacggacttgactttgttagcttattctaaagtggtatgcttgcagcttcttctctcgtaactcgtagcattatcttgagttttatcacttcttgtgatgtaaccatagctaaaattacattgacatatgacttcatgcataagcttatttcatttgttcctttcaaatcatcacacttcaacctaattgttcatgattgtcatgctacagcataattgaaagttttgcaatttcttacagaaccagatagatagtgattgctaacttatttgaattgcgccagccttaggatacttttgtacacattagatgaacatacagaagagatgaattataaaacctttttcatcagacgttcattactatatgatcactgtttgcattttaacttttctttggtaaattcgttatttgatcttgtgaccttgcattatgtgcagtaccttttcaacagggatttaaagtggtgctctacatttagcaagttaaagactttgtttctgaatgcatggtttgtggctcctgacctcagtgcactagcttggtttctccaacacgcacctcttcttgaaaggctttttcttagagtttcaaaggtattactatattttgtacatgtatgtcctgctttgatctgtttagtaaagtatttgttggcatcaggtacccaaaaatttagtgggaatggatggaagtttcaatcaattggaacaaccatttgcagctagccatcttcaaatagttgaaatctattgcagagaggttgatgggattattctcaaaattttgaaggtcttgaatgccaatggtgtaccactagagaaaattagtatccgatgttctggctgtgagttatctatgaacacccacgcttcctattatgcagttgtcaatatgtgttgtagagccaaccactgtccatagttatatataagttctgacttaatcacagtatgcattgagtatttctgaagtttgtttgctatgtcttacatgtactatctgctgatacttttgtgcatgttctactgtttttactgatggaaatgtcaacaaatgcacatattatcctccaattcagcccattgtgattttgattttattttttaggactaacccattttgattgaacctgctgccatatagatccttctcaaatgcttatacaaacaatatttgaatatctcatcctttagtgaagctgtgttcccttgtgtgtgttgaacactgcacctttactatgtaggctgagttcgggaaaacagtgttgcacattaacgcgtgattaattaagtattagctttaaaaaacttgaaaaacagattgatatgattttttaaagcaactttcctatagaaaagttttgcaaaaaacacaccgtttagcagtttgaaaagcgtgcaagcggaaaaagagggaggtgaattggaaagaagggggaagaacacagcctggctgcgttcggcaagaggagttgggaacccactcccctctttttccgcgcacacgcttttcaaactgttaaacaatgtattttttgaaaaaaaaaaattctatatgaaagttgcttaaaaaaatcatattgattcatttttcaaaaaaaaagctaatacttcattaatcacgcgctaatggatcagtccgttttccgtgcgggagggattagttcccatccctttctgccgaacacagccctaggggtgctcagcttagcttggtgcgggtttgcagctgcacagccacagcagaggttttgctgctggataccgcggctgcagctgcagcgccagctcaaacttacaagccccttagtttttttcttaattttaatgtgagcactattatActtgtcaaccgtgaaagcttaatCAAGACAAtcaagcactcaaaatattttggcaccatactgtagtaacatccttttaactttgcaataattagatctattttgcatgctgggccaggtgatgttcttgctatcaaaggaaattctatggatcatttcctaagtaaactaattttctcattatctctggaacgacctcctttctgagttgattctgccttttcattttttacagcttttaattttgtgtgtactggtgtcaactccaaggattaacaagacccaggctgttcatggtcataaatacgtctttgatggaacaggtatggaggtttcgtatagagacctaatagtattttcactaaatggaaataaacatagactcactgttattctagcgtgtaccttatttaacaacttctgtcctgattaagctgcactgtcagttgtgatcttataatgcctttcattcctgcagatattgtctctctagccctgaaagggtcacagttctccacttatgttatgtatcactgaaataaactagtgcaccttcactgaaagtaacttctgtgtcttaataccacccttttcctgctaattttctcttcaaataaagaaaaaagattagtgaattttccattatttcgagatttgaaatttaggatgtatctaatataagtcatggtagacagaattattagcaatagcaaatgataggaattgtcaaagcactatactccagtttcttaccaagtcattgtttgccatttctctcatgtaggtaggtgtcagtggtgctttcacggattcgactcttcggcagtattgaaaagatttgttccttttgatggatccaatcataccatttctctcattttttggtgtaaacctgtaaaatgtgaagatgacttctatgcatataaagtaatctagtgtacattatgccaagatctaattatcatctgaatctggtgtaactgataatttctggcatagttgttgatgcaccatcgcttaatctggtgtaattggtaatttaagggcagttgtgagtagaagtttctgtgatgctcctgcattcaaatactaacattcacagtttctatgatcctcgaatgatactaaaaactgatggaagagatttttctg
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| CDS seq | atggcgagcggggcggaccgcatcagcgacctcccggacgacgtcatccaccacgtcctctccctcctgccgtcgcgggacgcggtgcggacctgcgcgctcgcccgccgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgacagggggtgggccagcttcgacgcgctcgcccgcttcgtcgacagcctgctccgcctccgccgcggcggcgcggcgctggacgcctgcgacttcgacctcagattcgacggcgccttccccggcgaggagctgcagggcgacacctggatccgccgcgcccttcgccgccaggtccgggcgctccggttcgccgtctccacccaCccccgggtgcccatccctctctcggactcgcccctcgtctcccacagcctcacaaccctagagctgaggggtgtccagggaaacgaccaggttcttgatttctcgagctgtccttcgctggtggatctcaagatgaaggattgctacgttggtggcctggaaatgtggtctccatcgttgaagcatctgagcataacatactgcgtcttctactgcgactatcgcaccaggatggatttccctagccttgtcaccttcaagttcaacacaaataccgggaggactccgttgctcgagacgatgccttcgttggcaaccgcggcggttaggcttgatcatttctgtcatgaccgatgcgcaaatggttggtacgatgattgcggggatgctggttgtaagggttgtcatgattattataggcctgatgaatacgactgcgtgtttctcgaaggcttgacggaagctacggacttgactttgttagcttattctaaagtgtaccttttcaacagggatttaaagtggtgctctacatttagcaagttaaagactttgtttctgaatgcatggtttgtggctcctgacctcagtgcactagcttggtttctccaacacgcacctcttcttgaaaggctttttcttagagtttcaaaggtacccaaaaatttagtgggaatggatggaagtttcaatcaattggaacaaccatttgcagctagccatcttcaaatagttgaaatctattgcagagaggttgatgggattattctcaaaattttgaaggtcttgaatgccaatggtgtaccactagagaaaattagtatccgatgttctggctgtgagttatctatgaacacccacgcttcctattatgcagttgtcaatatgtgttgtagagccaaccactgtccatag
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| Protein seq | MASGADRISDLPDDVIHHVLSLLPSRDAVRTCALARRWRDLWRSVPAVRVAGDRGWASFDALARFVDSLLRLRRGGAALDACDFDLRFDGAFPGEELQGDTWIRRALRRQVRALRFAVSTHPRVPIPLSDSPLVSHSLTTLELRGVQGNDQVLDFSSCPSLVDLKMKDCYVGGLEMWSPSLKHLSITYCVFYCDYRTRMDFPSLVTFKFNTNTGRTPLLETMPSLATAAVRLDHFCHDRCANGWYDDCGDAGCKGCHDYYRPDEYDCVFLEGLTEATDLTLLAYSKVYLFNRDLKWCSTFSKLKTLFLNAWFVAPDLSALAWFLQHAPLLERLFLRVSKVPKNLVGMDGSFNQLEQPFAASHLQIVEIYCREVDGIILKILKVLNANGVPLEKISIRCSGCELSMNTHASYYAVVNMCCRANHCP |
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| Function | MEIOTIC F-BOX protein MOF [UniProtKB/Swiss-Prot:Q7X7A4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0006580 | OsNaBo_11g0006580.01 | Chr11 | 5226022 | 5229915 | + | NAM | ||
| CDS seq | atggcgagcggggcggaccgcatcagcgacctcccggacgacgtcatccaccacgtcctctccctcctgccgtcgcgggacgcggtgcggacctgcgcgctcgcccgccgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgacagggggtgggccagcttcgacgcgctcgcccgcttcgtcgacagcctgctccgcctccgccgcggcggcgcggcgctggacgcctgcgacttcgacctcagattcgacggcgccttccccggcgaggagctgcagggcgacacctggatccgccgcgcccttcgccgccaggtccgggcgctccggttcgccgtctccacccaCccccgggtgcccatccctctctcggactcgcccctcgtctcccacagcctcacaaccctagagctgaggggtgtccagggaaacgaccaggttcttgatttctcgagctgtccttcgctggtggatctcaagatgaaggattgctacgttggtggcctggaaatgtggtctccatcgttgaagcatctgagcataacatactgcgtcttctactgcgactatcgcaccaggatggatttccctagccttgtcaccttcaagttcaacacaaataccgggaggactccgttgctcgagacgatgccttcgttggcaaccgcggcggttaggcttgatcatttctgtcatgaccgatgcgcaaatggttggtacgatgattgcggggatgctggttgtaagggttgtcatgattattataggcctgatgaatacgactgcgtgtttctcgaaggcttgacggaagctacggacttgactttgttagcttattctaaagtgtaccttttcaacagggatttaaagtggtgctctacatttagcaagttaaagactttgtttctgaatgcatggtttgtggctcctgacctcagtgcactagcttggtttctccaacacgcacctcttcttgaaaggctttttcttagagtttcaaaggtacccaaaaatttagtgggaatggatggaagtttcaatcaattggaacaaccatttgcagctagccatcttcaaatagttgaaatctattgcagagaggttgatgggattattctcaaaattttgaaggtcttgaatgccaatggtgtaccactagagaaaattagtatccgatgttctggctcttttaattttgtgtgtactggtgtcaactccaaggattaa
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| Protein seq | MASGADRISDLPDDVIHHVLSLLPSRDAVRTCALARRWRDLWRSVPAVRVAGDRGWASFDALARFVDSLLRLRRGGAALDACDFDLRFDGAFPGEELQGDTWIRRALRRQVRALRFAVSTHPRVPIPLSDSPLVSHSLTTLELRGVQGNDQVLDFSSCPSLVDLKMKDCYVGGLEMWSPSLKHLSITYCVFYCDYRTRMDFPSLVTFKFNTNTGRTPLLETMPSLATAAVRLDHFCHDRCANGWYDDCGDAGCKGCHDYYRPDEYDCVFLEGLTEATDLTLLAYSKVYLFNRDLKWCSTFSKLKTLFLNAWFVAPDLSALAWFLQHAPLLERLFLRVSKVPKNLVGMDGSFNQLEQPFAASHLQIVEIYCREVDGIILKILKVLNANGVPLEKISIRCSGSFNFVCTGVNSKD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0006580 | OsNaBo_11g0006580.02 | Chr11 | 5226022 | 5227889 | + | NAM | ||
| CDS seq | atggcgagcggggcggaccgcatcagcgacctcccggacgacgtcatccaccacgtcctctccctcctgccgtcgcgggacgcggtgcggacctgcgcgctcgcccgccgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgacagggggtgggccagcttcgacgcgctcgcccgcttcgtcgacagcctgctccgcctccgccgcggcggcgcggcgctggacgcctgcgacttcgacctcagattcgacggcgccttccccggcgaggagctgcagggcgacacctggatccgccgcgcccttcgccgccaggtccgggcgctccggttcgccgtctccacccaCccccgggtgcccatccctctctcggactcgcccctcgtctcccacagcctcacaaccctagagctgaggggtgtccagggaaacgaccaggttcttgatttctcgagctgtccttcgctggtggatctcaagatgaaggattgctacgttggtggcctggaaatgtggtctccatcgttgaagcatctgagcataacatactgcgtcttctactgcgactatcgcaccaggatggatttccctagccttgtcaccttcaagttcaacacaaataccgggaggactccgttgctcgagacgatgccttcgttggcaaccgcggcggttaggcttgatcatttctgtcatgaccgatgcgcaaatggttggtacgatgattgcggggatgctggttgtaagggttgtcatgattattataggcctgatgaatacgactgcgtgtttctcgaaggcttgacggaagctacggacttgactttgttagcttattctaaagtgtaccttttcaacagggatttaaagtggtgctctacatttagcaagttaaagactttgtttctgaatgcatggtttgtggctcctgacctcagtgcactagcttggtttctccaacacgcacctcttcttgaaaggctttttcttagagtttcaaaggtacccaaaaatttagtgggaatggatggaagtttcaatcaattggaacaaccatttgcagctagccatcttcaaatagttgaaatctattgcagagaggttgatgggattattctcaaaattttgaaggtcttgaatgccaatggtgtaccactagagaaaattagtatccgatgttctggctgtgagttatctatgaacacccacgcttcctattatgcagttgtcaatatgtgttgtagagccaaccactgtccatag
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| Protein seq | MASGADRISDLPDDVIHHVLSLLPSRDAVRTCALARRWRDLWRSVPAVRVAGDRGWASFDALARFVDSLLRLRRGGAALDACDFDLRFDGAFPGEELQGDTWIRRALRRQVRALRFAVSTHPRVPIPLSDSPLVSHSLTTLELRGVQGNDQVLDFSSCPSLVDLKMKDCYVGGLEMWSPSLKHLSITYCVFYCDYRTRMDFPSLVTFKFNTNTGRTPLLETMPSLATAAVRLDHFCHDRCANGWYDDCGDAGCKGCHDYYRPDEYDCVFLEGLTEATDLTLLAYSKVYLFNRDLKWCSTFSKLKTLFLNAWFVAPDLSALAWFLQHAPLLERLFLRVSKVPKNLVGMDGSFNQLEQPFAASHLQIVEIYCREVDGIILKILKVLNANGVPLEKISIRCSGCELSMNTHASYYAVVNMCCRANHCP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.753099 | 0.000000 | 1.413176 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0208000 | RBH | 0.0 | 0.0 | 0.209669 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10180 | RBH | 0.0 | 0.0 | 0.053428 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0208000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006840 | RBH | 0.000000 | 0.0 | 2.165890 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006780 | RBH | 0.0 | 0.000000 | 0.733305 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006760 | RBH | 0.599847 | 2.416250 | 3.385246 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006700 | RBH | 0.078052 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006660 | RBH | 1.977130 | 0.000000 | 4.800694 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0089100 | RBH | 1.0173925 | 1.9782915 | 2.3965565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006680 | RBH | 0.169149 | 0.0 | 0.481431 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0090300 | RBH | 2.1194415 | 3.740084 | 6.3715615 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006640 | RBH | 0.048082 | 0.061934 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006740 | RBH | 0.107002 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006720 | RBH | 6.625844 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006780 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006790 | RBH | 0.0 | 1.632334 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006750 | RBH | 0.000000 | 1.916131 | 1.073014 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006370 | SBH | 0.242504 | 2.849076 | 0.510408 |
