Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_11g0005900 OGI:11014740 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr11:4669781-4673786
Gene Symbol RLCK315, OsRLCK315
DNA seq

gggagaacctgcaattacaatcttcctactttatttcccactttctcatcctttggatgagagaattttggtttataacaaggaaattacatccttctgagatgatagaacagacccataacttatgggagaacaagatctaagacatcagattcaaggacagacttggaggagggcattttgcatgtgccacttctcatccaaggaacaaaagaagttaacttaagaagggggaaaaagatctatacctactatacaaaaatgactggtgtgccatggactgatcaatcaaagctcgatgatcggctccatcttcctcgtaaatactcttccagggaagtgttcgcagcaatgaaatcgttgctgctgacagaggcagaatcgtcattgacatcgaatgcaagattgatgtaggactggatgttgcggttattctctggcggtgtaaccacaggttcatcaccatcgctctcgtatgacaatcctacttctgatctagcccacttcagaataccattgtcaccgttaagtagcttcagaacctggtatatacaccaagctgtgtgtaagatacagcacaatggaaacaatatatgaacttaggcattggatgcatcagaaaaacaaaatcttacaactgcaatgtgaggacggcgttgaggtgttggtctgatgcagagggaagcagcaagggtcatcctctccactttgttggcatggtcctctgtaggcaagttaggatccacaagttgtgtgagttttcctccctgtatgatggagtttgcctacatacaaaaacaaccctcattatctgctctttatcattatgcaacctaagctttgggtccaaagaaatgaaggatagaacatgacacttacccacatcactaggctctcctgacctttcggacaaccagtgcaaagcggtttcttgcctgaaatgagttcaagaaggacaacaccaaaagcatatacatcaattttgtcattcaccttgccatgcatgaaatattctggagccaagtatctgcaaaagatatgcatacactggtaaggtgaggttgccacaacccaacaaaaaaaaaaaggtgaaatagcaaacaatcaattagctaacaaacccgaaagttccagcaacatcgttgcatgtgatctgcgatgttgcatcagtgtcccagagcgcgaggccaaaatctgataactgcataacaacacattgaaattttaagctcacttaatttgatacagcataagaactgaagatttttcatgatgttgaatgggcaaatgttacctttggctcaaactcctctgagatgaggatgtttgatgacttgacatccctatggatcactggacgattgttgccattaccatggagataatctagtgcatgagcaactccaagggccacattgaacctctcggtccatccaaataagttgttgcatcctttctcacctgtgtgacatcagaataagatggttttcttgaaaaatggcaatgttaaagggagaaaaactaacaggtggtagaagttacataacataccatgcagtatctcttccaggctgcctctttgcatgtactcgtacaccaacagaaggtcagtgtccttgaagcagaaaccggcaagcgatataatgttcttgtggctgagggagctgataatctcaatctctgagacgaactccttcagcacttcagcggaatacttcaagatctttactgccaactccttgccattttctaagcaacctttgtaaacttggctagtgccaccttgtccaactatacactctgcagaaaacaaccaatttggtcactaaacctagcatgtctaaaaattttagcaataacagagaaaaagtgaaattcttaccaggtgagaaatcagaagtgatctttgcaagctcgctgtaactgaaggtagaataaacgtaagggaatttttctctgagtgcaatcaactcctctggaatttctttatccgaggaattatccaattcctcgatcaccacagaagactttcctgaattgcttctcgaagggacagccacccggtcacgcaaaatacgactagcacttgtgatgccatctggtgttgtggttctgtactctgaacggactggtgaagctgacgaatacctactaggtagccgcattgcccactgcaccacggacatctttgatctgtcatgcgaggcaggttttctgtcaggcaggaacttcttcctaaggaagggccagccagttgccacttctggtgattcacgacggtgaaccttcattgggactaatgccaatgaaacttctctcgttggtgccggagagcttggtggcatggtgacagcccggaaaatggacctgttatcttgttcacactcatcccgaagtttctccccaatcacagaagtcaggagcttccggtaactcctccttggtgtctctgtcactgcattccattttacaggcttcagcatatgctgaatttacagccgcccatgccaagaaatgagaataaactgaaaatgaaattgtgtaagtagcatacttgtgctagcactatggtatggttcttgctgtactgcatctttatgaaaaagaatcttgccattgttcactgcaagaaccgagcatccagtaggaaccctctttgcacagtacttggcaacagaaatggaggaggatctactgtttgggagcaaacaatagttccaacatcagagaacaaattatactacacacagtaaaagtgtgtcaaattaattaggtacctAaaagatagagaattcttcgcaacaccaaggatgagatgcgcagcgccgtaggaagccgcttctttcaccagagttttccggatagatgatcctccacagaccttgagctccaaattaatctgacgaatttaaagaggaaaggcacgatgataacaattttctagccaacctctcagctaaaccccaagcgggcaactagcaagcgaataattttacaagcatcagaaaatcaattccgcttcatgaatactgaatgaacaaaactctagctgtcaaaatttacggtctcaaaatttccgctgtgctcaaatcctcAaaaaagatgcgAaaaaaaatcagaccatccagtaaagaaataatttagggacagtgacccagtaaaaggggaagagaagcagcagagggagcagcaatcaattatgagccgaatttggagccgtttgcgaggaaaaaaagttgcaccgccaccattgaataggaggcgagaaagaagtaaccgatgcgaaaaagcagaagcacaacaagaaacggagatcactgacctgcttgagattgcagaagccgtcgtacacggcgagcaccgacaccagcgagtcctccgccgcgtcgctcctctcctccaatcccaccgctcctcctcctcctgctcctcctcctcctgctgctgaaaaaggagcccaagatgagaaaaggaaaaaaaaatccccAaaaaaaagatgagcaagcgaggcacaaggaaatggcaagagattagaagcagcgagaaagactcgcaccggcggcggcgacgtggagggcgacgacgcggtccccggcattggcgaccttgacgagcgcccacgtcagcagctcgcggctcgccgcgtccctcctgatccccaccaccaccgtcctccccctccccaccgccggcgacgccgccgccgccgggagcaaccctcctcctccgccgccgccgccgcggcgcgcgccgtcgggaacaagcagccgcatggctgccgcgcgagctctctcccctctcctctcctccctcgcagccgcagagagagaagcaagagagagaaagtagagagagagagatttgtgtcagcgatccgagggaggctgcgtcgttttatgcggccgcttgctcaagtcagcggcgtccctaaacccgtaattaatccttaatcccgttggttaatcacctgattcaaccgccgttacctgccgtttcttccccccat

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CDS seq

atggggggaagaaacggcagggggaggacggtggtggtggggatcaggagggacgcggcgagccgcgagctgctgacgtgggcgctcgtcaaggtcgccaatgccggggaccgcgtcgtcgccctccacgtcgccgccgccgcagcaggaggaggaggagcaggaggaggaggagcggtgggattggaggagaggagcgacgcggcggaggactcgctggtgtcggtgctcgccgtgtacgacggcttctgcaatctcaagcagattaatttggagctcaaggtctgtggaggatcatctatccggaaaactctggtgaaagaagcggcttcctacggcgctgcgcatctcatccttggtgttgcgaagaattctctatctttTagtagatcctcctccatttctgttgccaagtactgtgcaaagagggttcctactggatgctcggttcttgcagtgaacaatggcaagattctttttcataaagatgcagtacagcaagaaccataccatagtgctagcacaatgacagagacaccaaggaggagttaccggaagctcctgacttctgtgattggggagaaacttcgggatgagtgtgaacaagataacaggtccattttccgggctgtcaccatgccaccaagctctccggcaccaacgagagaagtttcattggcattagtcccaatgaaggttcaccgtcgtgaatcaccagaagtggcaactggctggcccttccttaggaagaagttcctgcctgacagaaaacctgcctcgcatgacagatcaaagatgtccgtggtgcagtgggcaatgcggctacctagtaggtattcgtcagcttcaccagtccgttcagagtacagaaccacaacaccagatggcatcacaagtgctagtcgtattttgcgtgaccgggtggctgtcccttcgagaagcaattcaggaaagtcttctgtggtgatcgaggaattggataattcctcggataaagaaattccagaggagttgattgcactcagagaaaaattcccttacgtttattctaccttcagttacagcgagcttgcaaagatcacttctgatttctcacctgagtgtatagttggacaaggtggcactagccaagtttacaaaggttgcttagaaaatggcaaggagttggcagtaaagatcttgaagtattccgctgaagtgctgaaggagttcgtctcagagattgagattatcagctccctcagccacaagaacattatatcgcttgccggtttctgcttcaaggacactgaccttctgttggtgtacgagtacatgcaaagaggcagcctggaagagatactgcatggtgagaaaggatgcaacaacttatttggatggaccgagaggttcaatgtggcccttggagttgctcatgcactagattatctccatggtaatggcaacaatcgtccagtgatccatagggatgtcaagtcatcaaacatcctcatctcagaggagtttgagccaaagttatcagattttggcctcgcgctctgggacactgatgcaacatcgcagatcacatgcaacgatgttgctggaactttcggatacttggctccagaatatttcatgcatggcaaggtgaatgacaaaattgatgtatatgcttttggtgttgtccttcttgaactcatttcaggcaagaaaccgctttgcactggttgtccgaaaggtcaggagagcctagtgatgtgggcaaactccatcatacagggaggaaaactcacacaacttgtggatcctaacttgcctacagaggaccatgccaacaaagtggagaggatgacccttgctgcttccctctgcatcagaccaacacctcaacgccgtcctcacattgcagttgttctgaagctacttaacggtgacaatggtattctgaagtgggctagatcagaagtaggattgtcatacgagagcgatggtgatgaacctgtggttacaccgccagagaataaccgcaacatccagtcctacatcaatcttgcattcgatgtcaatgacgattctgcctctgtcagcagcaacgatttcattgctgcgaacacttccctggaagagtatttacgaggaagatggagccgatcatcgagctttgattga

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Protein seq

MGGRNGRGRTVVVGIRRDAASRELLTWALVKVANAGDRVVALHVAAAAAGGGGAGGGGAVGLEERSDAAEDSLVSVLAVYDGFCNLKQINLELKVCGGSSIRKTLVKEAASYGAAHLILGVAKNSLSFSRSSSISVAKYCAKRVPTGCSVLAVNNGKILFHKDAVQQEPYHSASTMTETPRRSYRKLLTSVIGEKLRDECEQDNRSIFRAVTMPPSSPAPTREVSLALVPMKVHRRESPEVATGWPFLRKKFLPDRKPASHDRSKMSVVQWAMRLPSRYSSASPVRSEYRTTTPDGITSASRILRDRVAVPSRSNSGKSSVVIEELDNSSDKEIPEELIALREKFPYVYSTFSYSELAKITSDFSPECIVGQGGTSQVYKGCLENGKELAVKILKYSAEVLKEFVSEIEIISSLSHKNIISLAGFCFKDTDLLLVYEYMQRGSLEEILHGEKGCNNLFGWTERFNVALGVAHALDYLHGNGNNRPVIHRDVKSSNILISEEFEPKLSDFGLALWDTDATSQITCNDVAGTFGYLAPEYFMHGKVNDKIDVYAFGVVLLELISGKKPLCTGCPKGQESLVMWANSIIQGGKLTQLVDPNLPTEDHANKVERMTLAASLCIRPTPQRRPHIAVVLKLLNGDNGILKWARSEVGLSYESDGDEPVVTPPENNRNIQSYINLAFDVNDDSASVSSNDFIAANTSLEEYLRGRWSRSSSFD

Function Proline-rich receptor-like protein kinase PERK13 [UniProtKB/Swiss-Prot:Q9CAL8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_11g0005900 OsNaBo_11g0005900.01 Chr11 4669781 4673786 - NAM
CDS seq

atggggggaagaaacggcagggggaggacggtggtggtggggatcaggagggacgcggcgagccgcgagctgctgacgtgggcgctcgtcaaggtcgccaatgccggggaccgcgtcgtcgccctccacgtcgccgccgccgcagcaggaggaggaggagcaggaggaggaggagcggtgggattggaggagaggagcgacgcggcggaggactcgctggtgtcggtgctcgccgtgtacgacggcttctgcaatctcaagcagattaatttggagctcaaggtctgtggaggatcatctatccggaaaactctggtgaaagaagcggcttcctacggcgctgcgcatctcatccttggtgttgcgaagaattctctatctttTagtagatcctcctccatttctgttgccaagtactgtgcaaagagggttcctactggatgctcggttcttgcagtgaacaatggcaagattctttttcataaagatgcagtacagcaagaaccataccatagtgctagcacaatgacagagacaccaaggaggagttaccggaagctcctgacttctgtgattggggagaaacttcgggatgagtgtgaacaagataacaggtccattttccgggctgtcaccatgccaccaagctctccggcaccaacgagagaagtttcattggcattagtcccaatgaaggttcaccgtcgtgaatcaccagaagtggcaactggctggcccttccttaggaagaagttcctgcctgacagaaaacctgcctcgcatgacagatcaaagatgtccgtggtgcagtgggcaatgcggctacctagtaggtattcgtcagcttcaccagtccgttcagagtacagaaccacaacaccagatggcatcacaagtgctagtcgtattttgcgtgaccgggtggctgtcccttcgagaagcaattcaggaaagtcttctgtggtgatcgaggaattggataattcctcggataaagaaattccagaggagttgattgcactcagagaaaaattcccttacgtttattctaccttcagttacagcgagcttgcaaagatcacttctgatttctcacctgagtgtatagttggacaaggtggcactagccaagtttacaaaggttgcttagaaaatggcaaggagttggcagtaaagatcttgaagtattccgctgaagtgctgaaggagttcgtctcagagattgagattatcagctccctcagccacaagaacattatatcgcttgccggtttctgcttcaaggacactgaccttctgttggtgtacgagtacatgcaaagaggcagcctggaagagatactgcatggtgagaaaggatgcaacaacttatttggatggaccgagaggttcaatgtggcccttggagttgctcatgcactagattatctccatggtaatggcaacaatcgtccagtgatccatagggatgtcaagtcatcaaacatcctcatctcagaggagtttgagccaaagttatcagattttggcctcgcgctctgggacactgatgcaacatcgcagatcacatgcaacgatgttgctggaactttcggatacttggctccagaatatttcatgcatggcaaggtgaatgacaaaattgatgtatatgcttttggtgttgtccttcttgaactcatttcaggcaagaaaccgctttgcactggttgtccgaaaggtcaggagagcctagtgatgtgggcaaactccatcatacagggaggaaaactcacacaacttgtggatcctaacttgcctacagaggaccatgccaacaaagtggagaggatgacccttgctgcttccctctgcatcagaccaacacctcaacgccgtcctcacattgcagttgttctgaagctacttaacggtgacaatggtattctgaagtgggctagatcagaagtaggattgtcatacgagagcgatggtgatgaacctgtggttacaccgccagagaataaccgcaacatccagtcctacatcaatcttgcattcgatgtcaatgacgattctgcctctgtcagcagcaacgatttcattgctgcgaacacttccctggaagagtatttacgaggaagatggagccgatcatcgagctttgattga

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Protein seq

MGGRNGRGRTVVVGIRRDAASRELLTWALVKVANAGDRVVALHVAAAAAGGGGAGGGGAVGLEERSDAAEDSLVSVLAVYDGFCNLKQINLELKVCGGSSIRKTLVKEAASYGAAHLILGVAKNSLSFSRSSSISVAKYCAKRVPTGCSVLAVNNGKILFHKDAVQQEPYHSASTMTETPRRSYRKLLTSVIGEKLRDECEQDNRSIFRAVTMPPSSPAPTREVSLALVPMKVHRRESPEVATGWPFLRKKFLPDRKPASHDRSKMSVVQWAMRLPSRYSSASPVRSEYRTTTPDGITSASRILRDRVAVPSRSNSGKSSVVIEELDNSSDKEIPEELIALREKFPYVYSTFSYSELAKITSDFSPECIVGQGGTSQVYKGCLENGKELAVKILKYSAEVLKEFVSEIEIISSLSHKNIISLAGFCFKDTDLLLVYEYMQRGSLEEILHGEKGCNNLFGWTERFNVALGVAHALDYLHGNGNNRPVIHRDVKSSNILISEEFEPKLSDFGLALWDTDATSQITCNDVAGTFGYLAPEYFMHGKVNDKIDVYAFGVVLLELISGKKPLCTGCPKGQESLVMWANSIIQGGKLTQLVDPNLPTEDHANKVERMTLAASLCIRPTPQRRPHIAVVLKLLNGDNGILKWARSEVGLSYESDGDEPVVTPPENNRNIQSYINLAFDVNDDSASVSSNDFIAANTSLEEYLRGRWSRSSSFD

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.389701 20.091002 7.577031

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0194900 RBH 1.317075 0.862894 7.415190
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g08950 RBH 0.865296 0.675800 1.867415
Nipponbare | IRGSP 1.0 | RAP-db Os11g0194900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0006080 RBH 0.406631 6.686346 5.164860
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0006090 RBH 0.192469 7.365499 2.281194
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0006090 RBH 0.433698 9.730131 11.455740
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0006000 RBH 0.125798 0.466057 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0005960 RBH 4.311796 42.680027 12.031088
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0078300 RBH 4.87065 20.1636 22.846847
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0006010 RBH 0.175177 1.926698 1.467103
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0079300 RBH 5.7501675 18.313812 18.0589105
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0005990 RBH 0.068893 0.268738 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0006060 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0006060 RBH 2.338507 52.431084 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0006090 RBH 0.105944 0.0 0.377211
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0006070 RBH 0.072368 10.291030 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G006100 RBH 0.108750 14.276423 2.686140
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0006670 SBH 0.346137 1.439565 4.853590
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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