Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsNaBo_10g0017890 | OGI:10062950 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:22389277-22392047 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | tggaaaaacctaaatatagttcatcataagaaggtacattaagacatcacagcttacagatactatgcagtagttcctcttgaaagaaattgattaatacagtacaccttctgcataaccttacgctgcatgccatcaacaaagccgaaaacagaataccttaaggtcccactgaaaaagaacaatccaaaccatacccaaaacccgaaaaccacgccagccatcacacagtaggatagatactggtcctcgcattttctacaaaatgtctcatccgatgcaagtgaagaatttgtgcatgaaatgttcaatggaaagccacatagaccagaattgttgtggtatatggatgggtcactgagggtttgaagttgattcccggtgggtatcctacctgatagatgattattcgagagatttagaatgtcaagagtagatatatcagcaaggcttggaggaatggctcctgaaagttcattcaatgagaggtcaaggaactctagatttttcatattaccaatgtttttaggtatgccgcatgacagatggtttcttgacaagttcagaaatagaaggccttggagggttgttaactcatcagggatacactgcgacaatgagttacctgacaaattgatacccgttagtaattcaattgttttttcaaaaaattgctcttgccccttccagattgtatcgattccatccgagtaaagcagccaatttatgtaagaagaccattctaatgtttcttgagcagataaagtatttggattcttcatggaagttaggttgccaaaagatttgggaatcaatcctgtcaaaccattgttgcttatgtctaacagttgaagttgagagagattcgacaactctgaagggatttcacctgtgaagttgtttgatttgaggctaagaaacttcaacgatagaaggcctttcccaatccaaggaggaatacctccaaagaatctgttgttcccaatatctagggtgatcagcgccttacacatctctaacgctgatggaaaaacaccggtgaagccgttgtcggcaagatgaaccgattcaagagaacagttgtagttcgtctggaccgtagggatttcacctgagaatgcattgttggacaagtcgatgaactgcagattttgcaggttccaccagcagtcgggcagcttaccagtgaacctgttgtttgacaggtacaggatcttgagggagagcagttgacagaaatccgaaccggagctgctgttagaggaatttcctgacgaatgatcaaccccctgcagattgaaattgttgcccatatttcccggaatcggcccagaaatggagttatggctcagcttcaggaatgtcaaatggctgagatgacccaactcagatggaataccccctgtcagatcattatctgacaaatcaagatcctccaagcttgtcaaaccccctaattctgcaggtatgctgcctgataatctatttccaaacatgaacaacactatcagtttccctgcctttcccagctccggcgttatcttgccggtgaacaagttgttctgcacttggaaggatatgagctcgggccatctcgtgaacaacgccggtgggatctcaccggtgaggttgttcgttgaaatgctgaactcccgcattgcttgcatcccggcgaactccggcggcaatccaccggagagctggttcatggacagctccatgacagtgagattcttaagatttcccagctcgggcggcagagttgaaacgagctcggcgttcatgatgctgagctgctgcagcatctgtagctggccaagaacaggtgggatactcccgcccagcgggttgaatccgagatcaagaaccttcaactgcgacatcgatcccaggaacaccgggacaccgccggtgaggttgttgctgtcaatccgaaggtcctggagcttcgtcaacctcccgatcgacgccggaatttgaccggagaacgcgttgaaggacaagttgaggtacatcagattcgggagcttttccggcagcatgtccggtatgggcccggagaaattgttgtgcgacaggtcgaggaaggtgaggttgccgctccggatgacgaactccgggaagctgccgttgagggagttgaggaatagagacaggaacgtcatggtgggcatcggcgagaacttgcggaagtcgagcccggtcaggtagtttgctcccaggtcgacatgggcgatcttggggagccggctgagctggtgcgggatggcgccgacgaggttgttgttgtagaggcggaggtcgacgaggccggagaggtcgccgaactgcggcgggatggagccgtcgaaccagttgctgccgaggtcgagcgaggcgagtgagcgcagccgcgagatgctggccgggatcgcgccgacgaggtagttatcgttgaggtcgagctcagtgagcgccgggagcgccgcgaagtcgagcgcgtcgatgccgccgcggaggcggaggctccggagccggagcgaggcgacgctgccggcggcgtcgcaggccacgccgcgccaggtgcagaccggcgcggcccgtgtccagtcggacagcgaggccgcgtcgtccaggctggccttccacgccagcagcgcgtcggtctgcgacgacgacgctgccgcttcagccgacgcagggatggcagcggccgcggcgaagaggacgacgacgtcgacgaggaagaaacggtggacgacgggagccatgtgcgcagtcggttccttcat
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CDS seq | atgaaggaaccgactgcgcacatggctcccgtcgtccaccgtttcttcctcgtcgacgtcgtcgtcctcttcgccgcggccgctgccatccctgcgtcggctgaagcggcagcgtcgtcgtcgcagaccgacgcgctgctggcgtggaaggccagcctggacgacgcggcctcgctgtccgactggacacgggccgcgccggtctgcacctggcgcggcgtggcctgcgacgccgccggcagcgtcgcctcgctccggctccggagcctccgcctccgcggcggcatcgacgcgctcgacttcgcggcgctcccggcgctcactgagctcgacctcaacgataactacctcgtcggcgcgatcccggccagcatctcgcggctgcgctcactcgcctcgctcgacctcggcagcaactggttcgacggctccatcccgccgcagttcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccggctccccaagatcgcccatgtcgacctgggagcaaactacctgaccgggctcgacttccgcaatatcccacctgttcttggccagctacagatgctgcagcagctcagcatcatgaacgccgagctcgtttcaactctgccgcccgagctgggaaatcttaagaatctcactgtcatggagctgtccatgaaccagctctccggtggattgccgccggagttcgccgggatgcaagcaatgcgggagttcagcatttcaacgaacaacctcaccggtgagatcccaccggcgttgttcacgagatggcccgagctcatatccttccaagtgcagaacaacttgttcaccggcaagataacgccggagctgggaaaggcagggaaactgatagtgttgttcatgtttggaaatagattatcaggcagcatacctgcagaattagggggtttgacaagcttggaggatcttgatttgtcagataatgatctgacagggggtattccatctgagttgggtcatctcagccatttgacattcctgaagctgagccataactccatttctgggccgattccgggaaatatgggcaacaatttcaatctgcagggggttgatcattcgtcaggaaattcctctaacagcagctccggttcggatttctgtcaactgctctccctcaagatcctgtacctgtcaaacaacaggttcactggtaagctgcccgactgctggtggaacctgcaaaatctgcagttcatcgacttgtccaacaatgcattctcaggtgaaatccctacggtccagacgaactacaactgttctcttgaatcggttcatcttgccgacaacggcttcaccggtgtttttccatcagcgttagagatgtgtaaggcgctgatcaccctagatattgggaacaacagattctttggaggtattcctccttggattgggaaaggccttctatcgttgaagtttcttagcctcaaatcaaacaacttcacaggtgaaatcccttcagagttgtcgaatctctctcaacttcaactgttagacataagcaacaatggtttgacaggattgattcccaaatcttttggcaacctaacttccatgaagaatccaaatactttatctgctcaagaaacattagaatggtcttcttacataaattggctgctttactcggatggaatcgatacaatctggaaggggcaagagcaattttttgaaaaaacaattgaattactaacgggtatcaatttgtcaggtaactcattgtcgcagtgtatccctgatgagttaacaaccctccaaggccttctatttctgaacttgtcaagaaaccatctgtcatgcggcatacctaaaaacattggtaatatgaaaaatctagagttccttgacctctcattgaatgaactttcaggagccattcctccaagccttgctgatatatctactcttgacattctaaatctctcgaataatcatctatcaggtaggatacccaccgggaatcaacttcaaaccctcagtgacccatccatataccacaacaattctggtctatgtggctttccattgaacatttcatgcacaaattcttcacttgcatcggatgagacattttgtagaaaatgcgaggaccagtatctatcctactgtgtgatggctggcgtggttttcgggttttgggtatggtttggattgttctttttcagtgggaccttaaggtattctgttttcggctttgttgatggcatgcagcgtaaggttatgcagaaggtgtactgtattaatcaatttctttcaagaggaactactgcatag
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Protein seq | MKEPTAHMAPVVHRFFLVDVVVLFAAAAAIPASAEAAASSSQTDALLAWKASLDDAASLSDWTRAAPVCTWRGVACDAAGSVASLRLRSLRLRGGIDALDFAALPALTELDLNDNYLVGAIPASISRLRSLASLDLGSNWFDGSIPPQFGDLSGLVDLRLYNNNLVGAIPHQLSRLPKIAHVDLGANYLTGLDFRNIPPVLGQLQMLQQLSIMNAELVSTLPPELGNLKNLTVMELSMNQLSGGLPPEFAGMQAMREFSISTNNLTGEIPPALFTRWPELISFQVQNNLFTGKITPELGKAGKLIVLFMFGNRLSGSIPAELGGLTSLEDLDLSDNDLTGGIPSELGHLSHLTFLKLSHNSISGPIPGNMGNNFNLQGVDHSSGNSSNSSSGSDFCQLLSLKILYLSNNRFTGKLPDCWWNLQNLQFIDLSNNAFSGEIPTVQTNYNCSLESVHLADNGFTGVFPSALEMCKALITLDIGNNRFFGGIPPWIGKGLLSLKFLSLKSNNFTGEIPSELSNLSQLQLLDISNNGLTGLIPKSFGNLTSMKNPNTLSAQETLEWSSYINWLLYSDGIDTIWKGQEQFFEKTIELLTGINLSGNSLSQCIPDELTTLQGLLFLNLSRNHLSCGIPKNIGNMKNLEFLDLSLNELSGAIPPSLADISTLDILNLSNNHLSGRIPTGNQLQTLSDPSIYHNNSGLCGFPLNISCTNSSLASDETFCRKCEDQYLSYCVMAGVVFGFWVWFGLFFFSGTLRYSVFGFVDGMQRKVMQKVYCINQFLSRGTTA |
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Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNaBo_10g0017890 | OsNaBo_10g0017890.01 | Chr10 | 22389277 | 22392047 | - | NAM | ||
CDS seq | atgaaggaaccgactgcgcacatggctcccgtcgtccaccgtttcttcctcgtcgacgtcgtcgtcctcttcgccgcggccgctgccatccctgcgtcggctgaagcggcagcgtcgtcgtcgcagaccgacgcgctgctggcgtggaaggccagcctggacgacgcggcctcgctgtccgactggacacgggccgcgccggtctgcacctggcgcggcgtggcctgcgacgccgccggcagcgtcgcctcgctccggctccggagcctccgcctccgcggcggcatcgacgcgctcgacttcgcggcgctcccggcgctcactgagctcgacctcaacgataactacctcgtcggcgcgatcccggccagcatctcgcggctgcgctcactcgcctcgctcgacctcggcagcaactggttcgacggctccatcccgccgcagttcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccggctccccaagatcgcccatgtcgacctgggagcaaactacctgaccgggctcgacttccgcaatatcccacctgttcttggccagctacagatgctgcagcagctcagcatcatgaacgccgagctcgtttcaactctgccgcccgagctgggaaatcttaagaatctcactgtcatggagctgtccatgaaccagctctccggtggattgccgccggagttcgccgggatgcaagcaatgcgggagttcagcatttcaacgaacaacctcaccggtgagatcccaccggcgttgttcacgagatggcccgagctcatatccttccaagtgcagaacaacttgttcaccggcaagataacgccggagctgggaaaggcagggaaactgatagtgttgttcatgtttggaaatagattatcaggcagcatacctgcagaattagggggtttgacaagcttggaggatcttgatttgtcagataatgatctgacagggggtattccatctgagttgggtcatctcagccatttgacattcctgaagctgagccataactccatttctgggccgattccgggaaatatgggcaacaatttcaatctgcagggggttgatcattcgtcaggaaattcctctaacagcagctccggttcggatttctgtcaactgctctccctcaagatcctgtacctgtcaaacaacaggttcactggtaagctgcccgactgctggtggaacctgcaaaatctgcagttcatcgacttgtccaacaatgcattctcaggtgaaatccctacggtccagacgaactacaactgttctcttgaatcggttcatcttgccgacaacggcttcaccggtgtttttccatcagcgttagagatgtgtaaggcgctgatcaccctagatattgggaacaacagattctttggaggtattcctccttggattgggaaaggccttctatcgttgaagtttcttagcctcaaatcaaacaacttcacaggtgaaatcccttcagagttgtcgaatctctctcaacttcaactgttagacataagcaacaatggtttgacaggattgattcccaaatcttttggcaacctaacttccatgaagaatccaaatactttatctgctcaagaaacattagaatggtcttcttacataaattggctgctttactcggatggaatcgatacaatctggaaggggcaagagcaattttttgaaaaaacaattgaattactaacgggtatcaatttgtcaggtaactcattgtcgcagtgtatccctgatgagttaacaaccctccaaggccttctatttctgaacttgtcaagaaaccatctgtcatgcggcatacctaaaaacattggtaatatgaaaaatctagagttccttgacctctcattgaatgaactttcaggagccattcctccaagccttgctgatatatctactcttgacattctaaatctctcgaataatcatctatcaggtaggatacccaccgggaatcaacttcaaaccctcagtgacccatccatataccacaacaattctggtctatgtggctttccattgaacatttcatgcacaaattcttcacttgcatcggatgagacattttgtagaaaatgcgaggaccagtatctatcctactgtgtgatggctggcgtggttttcgggttttgggtatggtttggattgttctttttcagtgggaccttaaggtattctgttttcggctttgttgatggcatgcagcgtaaggttatgcagaaggtgtactgtattaatcaatttctttcaagaggaactactgcatag
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Protein seq | MKEPTAHMAPVVHRFFLVDVVVLFAAAAAIPASAEAAASSSQTDALLAWKASLDDAASLSDWTRAAPVCTWRGVACDAAGSVASLRLRSLRLRGGIDALDFAALPALTELDLNDNYLVGAIPASISRLRSLASLDLGSNWFDGSIPPQFGDLSGLVDLRLYNNNLVGAIPHQLSRLPKIAHVDLGANYLTGLDFRNIPPVLGQLQMLQQLSIMNAELVSTLPPELGNLKNLTVMELSMNQLSGGLPPEFAGMQAMREFSISTNNLTGEIPPALFTRWPELISFQVQNNLFTGKITPELGKAGKLIVLFMFGNRLSGSIPAELGGLTSLEDLDLSDNDLTGGIPSELGHLSHLTFLKLSHNSISGPIPGNMGNNFNLQGVDHSSGNSSNSSSGSDFCQLLSLKILYLSNNRFTGKLPDCWWNLQNLQFIDLSNNAFSGEIPTVQTNYNCSLESVHLADNGFTGVFPSALEMCKALITLDIGNNRFFGGIPPWIGKGLLSLKFLSLKSNNFTGEIPSELSNLSQLQLLDISNNGLTGLIPKSFGNLTSMKNPNTLSAQETLEWSSYINWLLYSDGIDTIWKGQEQFFEKTIELLTGINLSGNSLSQCIPDELTTLQGLLFLNLSRNHLSCGIPKNIGNMKNLEFLDLSLNELSGAIPPSLADISTLDILNLSNNHLSGRIPTGNQLQTLSDPSIYHNNSGLCGFPLNISCTNSSLASDETFCRKCEDQYLSYCVMAGVVFGFWVWFGLFFFSGTLRYSVFGFVDGMQRKVMQKVYCINQFLSRGTTA
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0468800 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38450 | SBH | 0.000000 | 0.000000 | 0.000000 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0468800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017890 | RBH | 0.070180 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014270 | SBH | 0.088633 | 2.990202 | 1.026245 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017670 | RBH | 0.155577 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018150 | RBH | 0.0 | 0.024619 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017880 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0337900 | RBH | 0.0103485 | 1.244629 | 0.0960355 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017780 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0362100 | RBH | 0 | 2.4304625 | 0.054666 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017570 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017400 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018050 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017620 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018100 | RBH | 0.0 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013900 | SBH | 0.0 | 0.476957 | 0.127443 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |