Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0015520 | OGI:10058290 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:20496166-20499423 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acacatctcatgtggaaatataggtgaaagagttggaagcttcacccaactgagcacttcagtttctttgcaactcttccgagtctcacccttcttctccaaggctatcggttgagccgtcgtcaatgcaaccgcgaccaaaccgccgatcgatccatcgagatgttcacgtcgaatccaccacctaatCcgtagcctcataccaccaaatctcactcctcctcccTccatgtattcTtatcatggtttcttcctcctcccgcctctcccctcgccgtcgcAttcttcttcttctcctCCcggcaagcatcgTcccgccattgttgggatccatttgtttattatggtgtttcttgacgtggtttagggcttcaagaacgccgccatgatcgggacaaggtgtgagacgacatgggtttgggtggtgatggtggtggtggtgattcttgcggcggcgatggcggcggtggtggagggtgtggggtcgccagagccggagctggaggcgttgcgcgacgagcggggcgggctggtggcgctgcgggacgcgctgcggtcggggagggacctgcactcgaactggacggggccgccgtgccacggcgggcggagccggtggtacggcgtggcgtgcgacggcgacgggcgggtggtcggcgtgcagctcgacggcgcgcagctcacgggcgcgctccccgcgggggcgctcgccggcgtggcgcggctggagacgctgtccctgcgcgacaacgccatccacggcgcgctcccgcggctcgacgcgctggcgcggctccgcgtcgtggacctgtcgagcaaccggttctcggggcccatcccgcgcgggtacgcggcggcgctgggtgagctcacgcggctcgagctccaggacaacctgatcaatggcacgctgccggcgttcgagcaggacgggctcgccgtgttcaacgtgtcgtacaacttcctccagggcgaggtgcccgacacccgcgcgctccgccggttccccgccaccgcgttcgcccacaacctcaggctctgcggcgaggttgtgAggacggagtgccgccgcgaGggctcgccattcgacgccgcgccggccggcggcggcggcagcggcagcgatggtggtgatcgggtcttcggggagcgcgacgccgccgcgccgccggcccggtggcgcaagcccatccggttcaggatagcgaggtggagcgtcgtggtgatcgcgctcatcgccgcgctggtgccgttcgccgcggtgctcatcttcctccaccacagcaagaagagccgggtggttcgtctcggcggcggtcgcgccgccGccgccgccaccgcaggtaagcacgccacaaaacccactccacttcgctcgccgccgctttcttctaagcacgccacaaaacccactccacttcgctcgccgccgctttcttctcgacgagtcattgacggcgacgtgacaagtggcaggtgacatcaaggacaaggcggcggagcaagccggcaagaaggtgagcagtggcagcggcaacggaagccggagcacgacggagtccggcaagggagcggcggatcagctacagttcttccggccggagaaggcgaccttcagcctcgacgagctgttccgttcgacggcggagatgctcggcaagggccggctagggatcacctacagcgtcgCcctccacgccggcggcggcggcccggtcgtcgtcgtcgtgaagcggctgcgcaacatggggcacgtgccacgcaaggacttcgcccAcaccatgcagctcctcggcaagctccgccatgagaacgtcgtcgaggtcgtcgcctgctacttctccaaggacgagaagctcgtcgtctacgaccacgtCcccggccgcagcctcttccacctcctccacggtcagtccatggccattcttgatcggagtagtggctgccatggcgactgatctgatgaagagtttcgatttttggaagtgtgtgaTtttttacctcgaggcgatatcctctcgTtttgtgtatgcagctaaaaaaattatcaaTttttttttaaaaaattatcaatttttttttAaaaaattatcAattttttttaaaaaattatgatatatcTtttcgtaaatatacgagtcaaaatttaacttgtacaatttaaaaaataataataaatttaaacgtgaATtacgcgttagattcataattaaatttgttaTttttgtttctatttatataagttgaatttaaatttgcatgtgTtgtggagtgttgtggagtgataaatcacatatagatctatcttactaaatttttTAaaTtttttttgactttttaagagacatataaaaataaaggaatatcggatcctcgattttgctgcagagaacagaggagaggggaggacgccgctgccatggccggcgaggttggcgatagcgaagggcgtggcgcgggggctggcctacctgcaccagacgctgccactcttccaccggccgccgcacggcgacctcaagtcgtcgaacgtgctcgtcgtcttCccggggcccggcggccgcggaggcggcggcggcgacgcggcgccggtggccaagctgactgaccacgggttccacccgctgctgccgcaccacgcgcaccgcctcgcggcggccaagtgcccggagttcgcgcgcgggaggcggcggctctcctcccgcgccgacgtgttctgcctcggcctcgtgctgctcgaggtggtcaccgggaaggtccccgtcgacgaggacggcgacctggcggagtgggcgcggctggcgctgagccacgagtggtcgacggacatcctcgacgtggagatcgtcgccgaccggggccgccacggcgacatgctgaggctcaccgaggtcgccctgctctgcgccgccgtcgaCcccgagcgccggcccaaggcgcacgacgtcgtcaggatgatcgacgacatcgccgccggctccgccgccgccgccggagacggggaggcgacggcggggcgagagctcgcgctgcggtgagctctgcacagaatttgccgggagaagtgttgtatccatttgtagctgtgtttgtgtcgattttaggcctcgtttggcatgggccagaattctagttcaaatttgaagttCatcttgggaaggaggatttggcccatttacaaaggaggcttaatcTtttcttaatgtaaagttgagattgggatttgatcggtttttaaattggtccattagtcttgtt
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| CDS seq | atgatcgggacaaggtgtgagacgacatgggtttgggtggtgatggtggtggtggtgattcttgcggcggcgatggcggcggtggtggagggtgtggggtcgccagagccggagctggaggcgttgcgcgacgagcggggcgggctggtggcgctgcgggacgcgctgcggtcggggagggacctgcactcgaactggacggggccgccgtgccacggcgggcggagccggtggtacggcgtggcgtgcgacggcgacgggcgggtggtcggcgtgcagctcgacggcgcgcagctcacgggcgcgctccccgcgggggcgctcgccggcgtggcgcggctggagacgctgtccctgcgcgacaacgccatccacggcgcgctcccgcggctcgacgcgctggcgcggctccgcgtcgtggacctgtcgagcaaccggttctcggggcccatcccgcgcgggtacgcggcggcgctgggtgagctcacgcggctcgagctccaggacaacctgatcaatggcacgctgccggcgttcgagcaggacgggctcgccgtgttcaacgtgtcgtacaacttcctccagggcgaggtgcccgacacccgcgcgctccgccggttccccgccaccgcgttcgcccacaacctcaggctctgcggcgaggttgtgAggacggagtgccgccgcgaGggctcgccattcgacgccgcgccggccggcggcggcggcagcggcagcgatggtggtgatcgggtcttcggggagcgcgacgccgccgcgccgccggcccggtggcgcaagcccatccggttcaggatagcgaggtggagcgtcgtggtgatcgcgctcatcgccgcgctggtgccgttcgccgcggtgctcatcttcctccaccacagcaagaagagccgggtggttcgtctcggcggcggtcgcgccgccGccgccgccaccgcaggtgacatcaaggacaaggcggcggagcaagccggcaagaaggtgagcagtggcagcggcaacggaagccggagcacgacggagtccggcaagggagcggcggatcagctacagttcttccggccggagaaggcgaccttcagcctcgacgagctgttccgttcgacggcggagatgctcggcaagggccggctagggatcacctacagcgtcgCcctccacgccggcggcggcggcccggtcgtcgtcgtcgtgaagcggctgcgcaacatggggcacgtgccacgcaaggacttcgcccAcaccatgcagctcctcggcaagctccgccatgagaacgtcgtcgaggtcgtcgcctgctacttctccaaggacgagaagctcgtcgtctacgaccactcgtcgaacgtgctcgtcgtcttCccggggcccggcggccgcggaggcggcggcggcgacgcggcgccggtggccaagctgactgaccacgggttccacccgctgctgccgcaccacgcgcaccgcctcgcggcggccaagtgcccggagttcgcgcgcgggaggcggcggctctcctcccgcgccgacgtgttctgcctcggcctcgtgctgctcgaggtggtcaccgggaaggtccccgtcgacgaggacggcgacctggcggagtgggcgcggctggcgctgagccacgagtggtcgacggacatcctcgacgtggagatcgtcgccgaccggggccgccacggcgacatgctgaggctcaccgaggtcgccctgctctgcgccgccgtcgaCcccgagcgccggcccaaggcgcacgacgtcgtcaggatgatcgacgacatcgccgccggctccgccgccgccgccggagacggggaggcgacggcggggcgagagctcgcgctgcggtga
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| Protein seq | MIGTRCETTWVWVVMVVVVILAAAMAAVVEGVGSPEPELEALRDERGGLVALRDALRSGRDLHSNWTGPPCHGGRSRWYGVACDGDGRVVGVQLDGAQLTGALPAGALAGVARLETLSLRDNAIHGALPRLDALARLRVVDLSSNRFSGPIPRGYAAALGELTRLELQDNLINGTLPAFEQDGLAVFNVSYNFLQGEVPDTRALRRFPATAFAHNLRLCGEVVRTECRREGSPFDAAPAGGGGSGSDGGDRVFGERDAAAPPARWRKPIRFRIARWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGRAAAAATAGDIKDKAAEQAGKKVSSGSGNGSRSTTESGKGAADQLQFFRPEKATFSLDELFRSTAEMLGKGRLGITYSVALHAGGGGPVVVVVKRLRNMGHVPRKDFAHTMQLLGKLRHENVVEVVACYFSKDEKLVVYDHSSNVLVVFPGPGGRGGGGGDAAPVAKLTDHGFHPLLPHHAHRLAAAKCPEFARGRRRLSSRADVFCLGLVLLEVVTGKVPVDEDGDLAEWARLALSHEWSTDILDVEIVADRGRHGDMLRLTEVALLCAAVDPERRPKAHDVVRMIDDIAAGSAAAAGDGEATAGRELALR |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g05160 [UniProtKB/Swiss-Prot:Q9FHK7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0015520 | OsNaBo_10g0015520.01 | Chr10 | 20496166 | 20499203 | + | NAM | ||
| CDS seq | atgatcgggacaaggtgtgagacgacatgggtttgggtggtgatggtggtggtggtgattcttgcggcggcgatggcggcggtggtggagggtgtggggtcgccagagccggagctggaggcgttgcgcgacgagcggggcgggctggtggcgctgcgggacgcgctgcggtcggggagggacctgcactcgaactggacggggccgccgtgccacggcgggcggagccggtggtacggcgtggcgtgcgacggcgacgggcgggtggtcggcgtgcagctcgacggcgcgcagctcacgggcgcgctccccgcgggggcgctcgccggcgtggcgcggctggagacgctgtccctgcgcgacaacgccatccacggcgcgctcccgcggctcgacgcgctggcgcggctccgcgtcgtggacctgtcgagcaaccggttctcggggcccatcccgcgcgggtacgcggcggcgctgggtgagctcacgcggctcgagctccaggacaacctgatcaatggcacgctgccggcgttcgagcaggacgggctcgccgtgttcaacgtgtcgtacaacttcctccagggcgaggtgcccgacacccgcgcgctccgccggttccccgccaccgcgttcgcccacaacctcaggctctgcggcgaggttgtgAggacggagtgccgccgcgaGggctcgccattcgacgccgcgccggccggcggcggcggcagcggcagcgatggtggtgatcgggtcttcggggagcgcgacgccgccgcgccgccggcccggtggcgcaagcccatccggttcaggatagcgaggtggagcgtcgtggtgatcgcgctcatcgccgcgctggtgccgttcgccgcggtgctcatcttcctccaccacagcaagaagagccgggtggttcgtctcggcggcggtcgcgccgccGccgccgccaccgcaggtgacatcaaggacaaggcggcggagcaagccggcaagaaggtgagcagtggcagcggcaacggaagccggagcacgacggagtccggcaagggagcggcggatcagctacagttcttccggccggagaaggcgaccttcagcctcgacgagctgttccgttcgacggcggagatgctcggcaagggccggctagggatcacctacagcgtcgCcctccacgccggcggcggcggcccggtcgtcgtcgtcgtgaagcggctgcgcaacatggggcacgtgccacgcaaggacttcgcccAcaccatgcagctcctcggcaagctccgccatgagaacgtcgtcgaggtcgtcgcctgctacttctccaaggacgagaagctcgtcgtctacgaccactcgtcgaacgtgctcgtcgtcttCccggggcccggcggccgcggaggcggcggcggcgacgcggcgccggtggccaagctgactgaccacgggttccacccgctgctgccgcaccacgcgcaccgcctcgcggcggccaagtgcccggagttcgcgcgcgggaggcggcggctctcctcccgcgccgacgtgttctgcctcggcctcgtgctgctcgaggtggtcaccgggaaggtccccgtcgacgaggacggcgacctggcggagtgggcgcggctggcgctgagccacgagtggtcgacggacatcctcgacgtggagatcgtcgccgaccggggccgccacggcgacatgctgaggctcaccgaggtcgccctgctctgcgccgccgtcgaCcccgagcgccggcccaaggcgcacgacgtcgtcaggatgatcgacgacatcgccgccggctccgccgccgccgccggagacggggaggcgacggcggggcgagagctcgcgctgcggtga
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| Protein seq | MIGTRCETTWVWVVMVVVVILAAAMAAVVEGVGSPEPELEALRDERGGLVALRDALRSGRDLHSNWTGPPCHGGRSRWYGVACDGDGRVVGVQLDGAQLTGALPAGALAGVARLETLSLRDNAIHGALPRLDALARLRVVDLSSNRFSGPIPRGYAAALGELTRLELQDNLINGTLPAFEQDGLAVFNVSYNFLQGEVPDTRALRRFPATAFAHNLRLCGEVVRTECRREGSPFDAAPAGGGGSGSDGGDRVFGERDAAAPPARWRKPIRFRIARWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGRAAAAATAGDIKDKAAEQAGKKVSSGSGNGSRSTTESGKGAADQLQFFRPEKATFSLDELFRSTAEMLGKGRLGITYSVALHAGGGGPVVVVVKRLRNMGHVPRKDFAHTMQLLGKLRHENVVEVVACYFSKDEKLVVYDHSSNVLVVFPGPGGRGGGGGDAAPVAKLTDHGFHPLLPHHAHRLAAAKCPEFARGRRRLSSRADVFCLGLVLLEVVTGKVPVDEDGDLAEWARLALSHEWSTDILDVEIVADRGRHGDMLRLTEVALLCAAVDPERRPKAHDVVRMIDDIAAGSAAAAGDGEATAGRELALR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0015520 | OsNaBo_10g0015520.02 | Chr10 | 20496483 | 20499423 | + | IsoSeq | ||
| CDS seq | atgggtttgggtggtgatggtggtggtggtgattcttgcggcggcgatggcggcggtggtggagggtgtggggtcgccagagccggagctggaggcgttgcgcgacgagcggggcgggctggtggcgctgcgggacgcgctgcggtcggggagggacctgcactcgaactggacggggccgccgtgccacggcgggcggagccggtggtacggcgtggcgtgcgacggcgacgggcgggtggtcggcgtgcagctcgacggcgcgcagctcacgggcgcgctccccgcgggggcgctcgccggcgtggcgcggctggagacgctgtccctgcgcgacaacgccatccacggcgcgctcccgcggctcgacgcgctggcgcggctccgcgtcgtggacctgtcgagcaaccggttctcggggcccatcccgcgcgggtacgcggcggcgct
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| Protein seq | MGLGGDGGGGDSCGGDGGGGGGCGVARAGAGGVARRAGRAGGAAGRAAVGEGPALELDGAAVPRRAEPVVRRGVRRRRAGGRRAARRRAAHGRAPRGGARRRGAAGDAVPARQRHPRRAPAARRAGAAPRRGPVEQPVLGAHPARVRGGA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.209869 | 4.587437 | 0.664277 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0492400 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g35040 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0492400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0015650 | RBH | 0.0 | 0.795469 | 0.732665 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0015880 | RBH | 0.046749 | 0.391341 | 0.116099 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0015290 | RBH | 0.0 | 0.000000 | 0.505871 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0015620 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0015570 | RBH | 0.000000 | 1.046757 | 4.012364 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0309300 | RBH | 3.759097 | 1.9198745 | 0.1122975 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0015520 | RBH | 0.071433 | 0.000000 | 0.089182 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0332100 | RBH | 3.4280655 | 1.573984 | 0.152954 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0015280 | RBH | 0.091743 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0015180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0015590 | RBH | 0.0 | 5.139755 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0015290 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0015800 | RBH | 0.049986 | 1.599389 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G015450 | RBH | 0.0 | 0.0 | 1.230991 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
