Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_10g0015520 OGI:10058290 | 16/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr10:20838398-20841683
Gene Symbol -
DNA seq

ACACATCTCATGTGGAAATATAGGTGAAAGAGTTGGAAGCTTCACCCAACTGAGCACTTCAGTTTCTTTGCAACTCTTCCGAGTCTCACCCTTCTTCTCCAAGGCTATCGGTTGAGCCGTCGTCAATGCAACCGCGACCAAACCGCCGATCGATCCATCGAGATGTTCACGTCGAATCCACCACCTAATCCGTAGCCTCATACCACCAAATCTCACTCCTCCTCCCTCCATGTATTCTTATCATGGTTTCTTCCTCCTCCCGCCTCTCCCCTCGCCGTCGCATTCTTCTTCTTCTCCTCCCGGCAAGCATCGTCCCGCCATTGTTGGGATCCATTTGTTTATTATGGTGTTTCTTGACGTGGTTTAGGGCTTCAAGAACGCCGCCATGATCGGGACAAGGTGTGAGACGACATGGGTTTGGGTGGTGATGGTGGTGGTGGTGATTCTTGCGGCGGCGGTGGTGGAGGGTGTGGGGTCGCCAGAGCCGGAGCTGGAGGCGTTGCGCGACGAGCGGGGCGGGCTGGTGGCGCTGCGGGACGCGCTGCGGTCGGGGAGGGACCTGCACTCGAACTGGACGGGGCCGCCGTGCCACGGCGGGCGGAGCCGGTGGTACGGCGTGGCGTGCGACGGCGACGGGCGGGTGGTCGGCGTGCAGCTCGACGGCGCGCAGCTCACGGGCGCGCTCCCCGCGGGGGCGCTCGCCGGCGTGGCGCGGCTGGAGACGCTGTCCCTGCGCGACAACGCCATCCACGGCGCGCTCCCGCGGCTCGACGCGCTGGCGCGGCTCCGCGTCGTGGACCTGTCGAGCAACCGGTTCTCGGGGCCCATCCCGCGCGGGTACGCGGCGGCGCTGGGTGAGCTCACGCGGCTCGAGCTCCAGGACAACCTGATCAATGGCACGCTGCCGGCGTTCGAGCAGGACGGGCTCGCCGTGTTCAACGTGTCGTACAACTTCCTCCAGGGCGAGGTGCCCGACACCCGCGCGCTCCGCCGGTTCCCCGCCACCGCGTTCGCCCACAACCTCAGGCTCTGCGGCGAGGTTGTGAGGACGGAGTGCCGCCGCGAGGGCTCGCCATTCGACGCCGCGCCGGCCGGCGGCGGCGGCAGCGGCAGCGATGGTGGTGATCGGGTCTTCGGGGAGCGCGACGCCGCCGCGCCGCCGGCCCGGTGGCGCAAGCCCATCCGGTTCAGGATAGCGAGGTGGAGCGTCGTGGTGATCGCGCTCATCGCCGCGCTGGTGCCGTTCGCCGCGGTGCTCATCTTCCTCCACCACAGCAAGAAGAGCCGGGTGGTTCGTCTCGGCGGCGGTCGCGCCGCCGCCGCCGCCACCGCAGGTAAGCACGCCACAAAACCCACTCCACTTCGCTCGCCGCCGCTTTCTTCTCGACGAGTCATTGACGGCGACGTGACAAGTGGCAGGTGACATCAAGGACAAGGCGGCGGAGCAAGCCGGCAAGAAGGTGAGCAGTGGCAGCGGCAACGGAAGCCGGAGCACGACGGAGTCCGGCAAGGGAGCGGCGGATCAGCTACAGTTCTTCCGGCCGGAGAAGGCGACCTTCAGCCTCGACGAGCTGTTCCGTTCGACGGCGGAGATGCTCGGCAAGGGCCGGCTAGGGATCACCTACCGCGTCGCCCTCCACGCCGGCGGCGGCGGCCCGGTCGTCGTCGTCGTGAAGCGGCTGCGCAACATGGGGCACGTGCCACGCAAGGACTTCGCCCACACCATGCAGCTCCTCGGCAAGCTCCGCCATGAGAACGTCGTCGAGGTCGTCGCCTGCTACTTCTCCAAGGACGAGAAGCTCGTCGTCTACGACCACGTCCCCGGCCGCAGCCTCTTCCACCTCCTCCACGGTCAGTCCATGGCCATTCTTGATCGGAGTAGTGGCTGCCATGGCGACTGATCTGATGAAGAGTTTCGATTTTTGGAAGTGTGTGATTTTTTACCTCGAGGCGATATCCTCTCGTTTTGTGTATGCAGCTAAAAAAATTATTAATTTTTTTAAAAAAAATTATGCTATATCTTTTCGTAAATATACGAGTCAAAATTTAACTTGTACAATTTAAAAAATAATAATAAATTTAAACGTGAATTACGCGTTAGATTCATAATTAAATTTGTTATTTTTGTTTCTATTTATATAAGTTAAATTTGAATTTGCATGTGTTGTGGAGTGTTGTGGAGTGATAAATCACATATAGATCTATCTTACTAAATTTTTTAAATTTTTTTGTGACTTTTTAAGAGACATATAAAAATAAAGGAATATCGGATCCTCGATTTTGCTGCAGAGAACAGAGGAGAGGGGAGGACGCCGCTGCCATGGCCGGCGAGGTTGGCGATAGCGAAGGGCGTGGCGCGGGGGCTGGCCTACCTGCACCAGACGCTGCCACTCTTCCACCGGCCGCCGCACGGCGACCTCAAGTCGTCGAACGTGCTCGTCGTCTTCCCGGGGCCCGGCGGCCGCGGAGGCGGCGGCGGCGACGCGGCGCCGGTGGCCAAGCTGACTGACCACGGGTTCCACCCGCTGCTGCCGCACCACGCGCACCGCCTCGCGGCGGCCAAGTGCCCGGAGCTCGCGCGCGGGAGGCGGCGGCTCTCCTCCCGCGCCGACGTGTTCTGCCTCGGCCTCGTGCTGCTCGAGGTGGTCACCGGGAAGGTCCCCGTCGACGAGGACGGCGACCTGGCGGAGTGGGCGCGGCTGGCGCTGAGCCACGAGTGGTCGACGGACATCCTCGACGTGGAGATCGTCGCCGACCGGGGCCGCCACGGCGACATGCTGAGGCTCACCGAGGTCGCCCTGCTCTGCGCCGCCGTCGACCCCGAGCGCCGGCCCAAGGCGCACGACGTCGTCAGGATGATCGACGACATCGCCGCCGGCTCCGCCGCCGCCGCCGGAGACGGGGAGGCGACGGCGGGGCGAGAGCTCGCGCTGCGGTGAGCTCTGCACAGAATTTGCCGGGAGAAGTGTTGTATCCATTTGTAGCTGTGTTTGTGTCGATTTTAGGCCTCGTTTGGCATGGGCCAGAATTCTAGTTCAAATTTGAAGTTCATCTTGGGAAGGAGGATTTGGCCCATTTACAAAGGAGGCTTAATCTTTTCTTAATGTAAAGTTGAGATTGGGATTTGATCGGTTTTTAAATTGGTCCATTAGTCTTGTTAAACTTTTTCTGGGGGAAAAAAACTCAACTACCCAGAGGTGCCTATGTCTGTTCAAACGGAAGGTGTACAACTACTTTAGCTTGAGTACACTCCACTTATAAAAATCCTCTTTAATCTTAACAAACT

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CDS seq

ATGATCGGGACAAGGTGTGAGACGACATGGGTTTGGGTGGTGATGGTGGTGGTGGTGATTCTTGCGGCGGCGGTGGTGGAGGGTGTGGGGTCGCCAGAGCCGGAGCTGGAGGCGTTGCGCGACGAGCGGGGCGGGCTGGTGGCGCTGCGGGACGCGCTGCGGTCGGGGAGGGACCTGCACTCGAACTGGACGGGGCCGCCGTGCCACGGCGGGCGGAGCCGGTGGTACGGCGTGGCGTGCGACGGCGACGGGCGGGTGGTCGGCGTGCAGCTCGACGGCGCGCAGCTCACGGGCGCGCTCCCCGCGGGGGCGCTCGCCGGCGTGGCGCGGCTGGAGACGCTGTCCCTGCGCGACAACGCCATCCACGGCGCGCTCCCGCGGCTCGACGCGCTGGCGCGGCTCCGCGTCGTGGACCTGTCGAGCAACCGGTTCTCGGGGCCCATCCCGCGCGGGTACGCGGCGGCGCTGGGTGAGCTCACGCGGCTCGAGCTCCAGGACAACCTGATCAATGGCACGCTGCCGGCGTTCGAGCAGGACGGGCTCGCCGTGTTCAACGTGTCGTACAACTTCCTCCAGGGCGAGGTGCCCGACACCCGCGCGCTCCGCCGGTTCCCCGCCACCGCGTTCGCCCACAACCTCAGGCTCTGCGGCGAGGTTGTGAGGACGGAGTGCCGCCGCGAGGGCTCGCCATTCGACGCCGCGCCGGCCGGCGGCGGCGGCAGCGGCAGCGATGGTGGTGATCGGGTCTTCGGGGAGCGCGACGCCGCCGCGCCGCCGGCCCGGTGGCGCAAGCCCATCCGGTTCAGGATAGCGAGGTGGAGCGTCGTGGTGATCGCGCTCATCGCCGCGCTGGTGCCGTTCGCCGCGGTGCTCATCTTCCTCCACCACAGCAAGAAGAGCCGGGTGGTTCGTCTCGGCGGCGGTCGCGCCGCCGCCGCCGCCACCGCAGGTGACATCAAGGACAAGGCGGCGGAGCAAGCCGGCAAGAAGGTGAGCAGTGGCAGCGGCAACGGAAGCCGGAGCACGACGGAGTCCGGCAAGGGAGCGGCGGATCAGCTACAGTTCTTCCGGCCGGAGAAGGCGACCTTCAGCCTCGACGAGCTGTTCCGTTCGACGGCGGAGATGCTCGGCAAGGGCCGGCTAGGGATCACCTACCGCGTCGCCCTCCACGCCGGCGGCGGCGGCCCGGTCGTCGTCGTCGTGAAGCGGCTGCGCAACATGGGGCACGTGCCACGCAAGGACTTCGCCCACACCATGCAGCTCCTCGGCAAGCTCCGCCATGAGAACGTCGTCGAGGTCGTCGCCTGCTACTTCTCCAAGGACGAGAAGCTCGTCGTCTACGACCACGTCCCCGGCCGCAGCCTCTTCCACCTCCTCCACGCGAAGGGCGTGGCGCGGGGGCTGGCCTACCTGCACCAGACGCTGCCACTCTTCCACCGGCCGCCGCACGGCGACCTCAAGTCGTCGAACGTGCTCGTCGTCTTCCCGGGGCCCGGCGGCCGCGGAGGCGGCGGCGGCGACGCGGCGCCGGTGGCCAAGCTGACTGACCACGGGTTCCACCCGCTGCTGCCGCACCACGCGCACCGCCTCGCGGCGGCCAAGTGCCCGGAGCTCGCGCGCGGGAGGCGGCGGCTCTCCTCCCGCGCCGACGTGTTCTGCCTCGGCCTCGTGCTGCTCGAGGTGGTCACCGGGAAGGTCCCCGTCGACGAGGACGGCGACCTGGCGGAGTGGGCGCGGCTGGCGCTGAGCCACGAGTGGTCGACGGACATCCTCGACGTGGAGATCGTCGCCGACCGGGGCCGCCACGGCGACATGCTGAGGCTCACCGAGGTCGCCCTGCTCTGCGCCGCCGTCGACCCCGAGCGCCGGCCCAAGGCGCACGACGTCGTCAGGATGATCGACGACATCGCCGCCGGCTCCGCCGCCGCCGCCGGAGACGGGGAGGCGACGGCGGGGCGAGAGCTCGCGCTGCGGTGA

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Protein seq

MIGTRCETTWVWVVMVVVVILAAAVVEGVGSPEPELEALRDERGGLVALRDALRSGRDLHSNWTGPPCHGGRSRWYGVACDGDGRVVGVQLDGAQLTGALPAGALAGVARLETLSLRDNAIHGALPRLDALARLRVVDLSSNRFSGPIPRGYAAALGELTRLELQDNLINGTLPAFEQDGLAVFNVSYNFLQGEVPDTRALRRFPATAFAHNLRLCGEVVRTECRREGSPFDAAPAGGGGSGSDGGDRVFGERDAAAPPARWRKPIRFRIARWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGRAAAAATAGDIKDKAAEQAGKKVSSGSGNGSRSTTESGKGAADQLQFFRPEKATFSLDELFRSTAEMLGKGRLGITYRVALHAGGGGPVVVVVKRLRNMGHVPRKDFAHTMQLLGKLRHENVVEVVACYFSKDEKLVVYDHVPGRSLFHLLHAKGVARGLAYLHQTLPLFHRPPHGDLKSSNVLVVFPGPGGRGGGGGDAAPVAKLTDHGFHPLLPHHAHRLAAAKCPELARGRRRLSSRADVFCLGLVLLEVVTGKVPVDEDGDLAEWARLALSHEWSTDILDVEIVADRGRHGDMLRLTEVALLCAAVDPERRPKAHDVVRMIDDIAAGSAAAAGDGEATAGRELALR

Function Probable leucine-rich repeat receptor-like protein kinase At5g05160 [UniProtKB/Swiss-Prot:Q9FHK7]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_10g0015520 OsIR64_10g0015520.01 Chr10 20838398 20841683 + NAM
CDS seq

ATGATCGGGACAAGGTGTGAGACGACATGGGTTTGGGTGGTGATGGTGGTGGTGGTGATTCTTGCGGCGGCGGTGGTGGAGGGTGTGGGGTCGCCAGAGCCGGAGCTGGAGGCGTTGCGCGACGAGCGGGGCGGGCTGGTGGCGCTGCGGGACGCGCTGCGGTCGGGGAGGGACCTGCACTCGAACTGGACGGGGCCGCCGTGCCACGGCGGGCGGAGCCGGTGGTACGGCGTGGCGTGCGACGGCGACGGGCGGGTGGTCGGCGTGCAGCTCGACGGCGCGCAGCTCACGGGCGCGCTCCCCGCGGGGGCGCTCGCCGGCGTGGCGCGGCTGGAGACGCTGTCCCTGCGCGACAACGCCATCCACGGCGCGCTCCCGCGGCTCGACGCGCTGGCGCGGCTCCGCGTCGTGGACCTGTCGAGCAACCGGTTCTCGGGGCCCATCCCGCGCGGGTACGCGGCGGCGCTGGGTGAGCTCACGCGGCTCGAGCTCCAGGACAACCTGATCAATGGCACGCTGCCGGCGTTCGAGCAGGACGGGCTCGCCGTGTTCAACGTGTCGTACAACTTCCTCCAGGGCGAGGTGCCCGACACCCGCGCGCTCCGCCGGTTCCCCGCCACCGCGTTCGCCCACAACCTCAGGCTCTGCGGCGAGGTTGTGAGGACGGAGTGCCGCCGCGAGGGCTCGCCATTCGACGCCGCGCCGGCCGGCGGCGGCGGCAGCGGCAGCGATGGTGGTGATCGGGTCTTCGGGGAGCGCGACGCCGCCGCGCCGCCGGCCCGGTGGCGCAAGCCCATCCGGTTCAGGATAGCGAGGTGGAGCGTCGTGGTGATCGCGCTCATCGCCGCGCTGGTGCCGTTCGCCGCGGTGCTCATCTTCCTCCACCACAGCAAGAAGAGCCGGGTGGTTCGTCTCGGCGGCGGTCGCGCCGCCGCCGCCGCCACCGCAGGTGACATCAAGGACAAGGCGGCGGAGCAAGCCGGCAAGAAGGTGAGCAGTGGCAGCGGCAACGGAAGCCGGAGCACGACGGAGTCCGGCAAGGGAGCGGCGGATCAGCTACAGTTCTTCCGGCCGGAGAAGGCGACCTTCAGCCTCGACGAGCTGTTCCGTTCGACGGCGGAGATGCTCGGCAAGGGCCGGCTAGGGATCACCTACCGCGTCGCCCTCCACGCCGGCGGCGGCGGCCCGGTCGTCGTCGTCGTGAAGCGGCTGCGCAACATGGGGCACGTGCCACGCAAGGACTTCGCCCACACCATGCAGCTCCTCGGCAAGCTCCGCCATGAGAACGTCGTCGAGGTCGTCGCCTGCTACTTCTCCAAGGACGAGAAGCTCGTCGTCTACGACCACGTCCCCGGCCGCAGCCTCTTCCACCTCCTCCACGCGAAGGGCGTGGCGCGGGGGCTGGCCTACCTGCACCAGACGCTGCCACTCTTCCACCGGCCGCCGCACGGCGACCTCAAGTCGTCGAACGTGCTCGTCGTCTTCCCGGGGCCCGGCGGCCGCGGAGGCGGCGGCGGCGACGCGGCGCCGGTGGCCAAGCTGACTGACCACGGGTTCCACCCGCTGCTGCCGCACCACGCGCACCGCCTCGCGGCGGCCAAGTGCCCGGAGCTCGCGCGCGGGAGGCGGCGGCTCTCCTCCCGCGCCGACGTGTTCTGCCTCGGCCTCGTGCTGCTCGAGGTGGTCACCGGGAAGGTCCCCGTCGACGAGGACGGCGACCTGGCGGAGTGGGCGCGGCTGGCGCTGAGCCACGAGTGGTCGACGGACATCCTCGACGTGGAGATCGTCGCCGACCGGGGCCGCCACGGCGACATGCTGAGGCTCACCGAGGTCGCCCTGCTCTGCGCCGCCGTCGACCCCGAGCGCCGGCCCAAGGCGCACGACGTCGTCAGGATGATCGACGACATCGCCGCCGGCTCCGCCGCCGCCGCCGGAGACGGGGAGGCGACGGCGGGGCGAGAGCTCGCGCTGCGGTGA

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Protein seq

MIGTRCETTWVWVVMVVVVILAAAVVEGVGSPEPELEALRDERGGLVALRDALRSGRDLHSNWTGPPCHGGRSRWYGVACDGDGRVVGVQLDGAQLTGALPAGALAGVARLETLSLRDNAIHGALPRLDALARLRVVDLSSNRFSGPIPRGYAAALGELTRLELQDNLINGTLPAFEQDGLAVFNVSYNFLQGEVPDTRALRRFPATAFAHNLRLCGEVVRTECRREGSPFDAAPAGGGGSGSDGGDRVFGERDAAAPPARWRKPIRFRIARWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGRAAAAATAGDIKDKAAEQAGKKVSSGSGNGSRSTTESGKGAADQLQFFRPEKATFSLDELFRSTAEMLGKGRLGITYRVALHAGGGGPVVVVVKRLRNMGHVPRKDFAHTMQLLGKLRHENVVEVVACYFSKDEKLVVYDHVPGRSLFHLLHAKGVARGLAYLHQTLPLFHRPPHGDLKSSNVLVVFPGPGGRGGGGGDAAPVAKLTDHGFHPLLPHHAHRLAAAKCPELARGRRRLSSRADVFCLGLVLLEVVTGKVPVDEDGDLAEWARLALSHEWSTDILDVEIVADRGRHGDMLRLTEVALLCAAVDPERRPKAHDVVRMIDDIAAGSAAAAGDGEATAGRELALR

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Gene Transcript Chromosome Start End Strand Source
OsIR64_10g0015520 OsIR64_10g0015520.02 Chr10 20838675 20841555 + IsoSeq
CDS seq

ATGGGTTTGGGTGGTGATGGTGGTGGTGGTGATTCTTGCGGCGGCGGTGGTGGAGGGTGTGGGGTCGCCAGAGCCGGAGCTGGAGGCGTTGCGCGACGAGCGGGGCGGGCTGGTGGCGCTGCGGGACGCGCTGCGGTCGGGGAGGGACCTGCACTCGAACTGGACGGGGCCGCCGTGCCACGGCGGGCGGAGCCGGTGGTACGGCGTGGCGTGCGACGGCGACGGGCGGGTGGTCGGCGTGCAGCTCGACGGCGCGCAGCTCACGGGCGCGCTCCCCGCGGGGGCGCTCGCCGGCGTGGCGCGGCTGGAGACGCTGTCCCTGCGCGACAACGCCATCCACGGCGCGCTCCCGCGGCTCGACGCGCTGGCGCGGCTCCGCGTCGTGGACCTGTCGAGCAACCGGTTCTCGGGGCCCATCCCGCGCGGGTACGCGGCGGCGCT

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Protein seq

MGLGGDGGGGDSCGGGGGGCGVARAGAGGVARRAGRAGGAAGRAAVGEGPALELDGAAVPRRAEPVVRRGVRRRRAGGRRAARRRAAHGRAPRGGARRRGAAGDAVPARQRHPRRAPAARRAGAAPRRGPVEQPVLGAHPARVRGGA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr10 20840248 20840741 + OsIR64_10g0015520.02 OsIR64_10g0015520.02,OsIR64_10g0015520.01 All

Expression

Leaf Root Panicle
FPKM 0.071433 0.000000 0.089182

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0492400 RBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g35040 RBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os10g0492400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0015650 RBH 0.0 0.795469 0.732665
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0015880 RBH 0.046749 0.391341 0.116099
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0015290 RBH 0.0 0.000000 0.505871
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0015620 RBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0015570 RBH 0.000000 1.046757 4.012364
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0309300 RBH 3.759097 1.9198745 0.1122975
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0332100 RBH 3.4280655 1.573984 0.152954
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0015280 RBH 0.091743 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0015180 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0015590 RBH 0.0 5.139755 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0015290 RBH 0.000000 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0015800 RBH 0.049986 1.599389 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G015450 RBH 0.0 0.0 1.230991
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0015520 RBH 0.209869 4.587437 0.664277
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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