Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_08g0007210 | OGI:08022100 | 8/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr08:8154146-8160067 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aaccaaacattaatcatgaacacgatcatccaaaaaaattccaactacaaaattattgcaatattgattgaacaatcaaactactcatgctgtcatgccgcaaaatgccatatctctgcaggcaatgtataacagggaaacagaatattaaaatgacagcatcagtgtgttgctagttatgctgctatattcccacactcagtggtattaagcctgatcaactcatagtagtcgtcatcactgagatcatccatgtccggcaacgaatcggtgtagatgaaatgcaggaggcccctgaaaacatcaggctgcatgtcttcgacggttacccgccgggccctcttctccttcatctgcccatagagctccgccttgaagacggatgaccgtgctgcaaggacgatctgtgcgcggcgattttctctcccccaacaacgaaagtcacatccgccccttcccccttctccaacaattcgacaaaattttccaatatatctgacggcggcaccttgattaattcatgggccttcacggtattagacgccatcgattcctggacgacgacggtaacaaagcattcgattgtgaggcgatcgtccttgatgtagcctgacgcttccatctccagttgacttctgtgcatgaaagtcgcgtaatgcggagcaaatttgctactgtcctcagaattgaacatcctgtgagttgtttcagagtagacactctttggcaacccggtggcaagattaaccaatctcaggtcgtaggccgcccggacggcgcagtccttggtcaggagctcgaggtagaccgagatgtagtacttggcaccatcgcctttgccgtcggggtagaagcggacgcaccagtcgtagccgccgacggcgaaggtggcggattcgacgaactcgtccacgccgatgcccttcttgaggctgtacccgacgatctcgaacgagtgcctgccttcctccgactccgtggtgtgcctcgacaccgtcttcttcttcttggacaccatcccccgctgcgaaatttcccaagaaccgatcgatcagagcaggttggggggatcggatcaaatcggcgggaaaggggcaagctagctcttcttgcagcggcggaggaggaggaagcgcggggtgaagctgatggataccaaccttgcgtgcgtcgagggcagaggcgatcggcggcggcggttgcggcggaagatggtgagcgacgacggcgaggagacgcctcttcgatctcctacatcaaaccctaggcagtgaatttttatattttgccccttccaattggatatccaactttttcttttttaagatgatggaaaataagagtgttttacagttaaagatgcatcggttggtctggtgcgcgtcgtccgtttgcattagtttcggttcttcaattcgtccaagctgcatctatagatggccataaggcccgatggcccggcccaggtacggcctggcccgattggccaggcctgggctgattcccaaacacggtgggcaagcccggcacggccctatccaatgaggagggaagaaaaatagtttagggactaaaattagacttagtggccaagaggagaagggatgcatatagacttattacaattattcatacatgacccaaagaaatgagggacggaaattataccttttttatgaagaagcatgatgggttgtcgtgccttcgggccggtccaacatggcccgagtcgtattgggcagtgcctgggccgatgcttcagcatgtgggctggcacgtcatggtccggtgtgttggtcgggccgtgcctaggccgtgccgagccgtgccgcccagatggccatctatagctgcatcatccgactcagggacctattcggttcacgctaggaaaactaggaaccgtgtcatttaacggggaagttcctgaggctgcaagtgggccaccctgtcaggtgacggtagatttaacgaagagagctaaaacatgtagttttgtaataacggggtccctaaatatgtagttttatgagataattttttaaaattgtagtttttgtgatagattgtgcaaagtacctgtagttttgtgaaatttactcttttatttatgatcagttacaggcttatttgagcttcgcagggttgccatgtaggagagatgaaccatggtggagagaaaatgggaataagcattgggttttgttagatttggtatttttctactctagaaataggatgtgcttcaattaattaccatcctagcccacaattcattgaactcagatggtcttacatggtattgtcagagtgcaaagtaatcaaaagtggcaatatttatagagtagcaaatcaccaatattattttagggaagtgagtgtagtactgatatacttcctccggtaattagtatatgatgttttaacgctaattttagtgacggagggattatataataatgactggagggagtatataatatccaacacacacgttctccaaaaatgtgtgtcacattttgaagataatgcaatcaacactatgatagcataaggcatatgctgcgctacatccataagctccacacaatggcaagctaatgtgcaataatactagatgaaactctttgcataattgcattgctacaggagtattgtatgctaatatggtagaaatacaacatatgatgactttaatctaagctaaacgacataactttatatactttgcgtaatttacatctttaatcaatcatcgataaaagctacaaacaattgattgatcatgcaaaggcaaaaactaattaaggactgtgactttataagagaagaaaaagaatggagtcaatttagaccatagagtaatcatcgaagggcttaacatagttgaggtgatgcgtcttaatgagatggaagataaatagcattaactgtacttagtgtggatgaactatatagttatactaatcacatctcgtacattgttgcgggatgattatgtacatgttaatgactttaaaaagatgtgcacactaaagaaaaagaataactgaacaaagggAaaaaaatgtctagtagttagcaacaaaataagatttactttaagaggacttacattaaaattttgatattatgctatcttgtaaacctgttcatatatgtgttatgccaacatcagtatgaaagaaatagtgcaaactaataaatctggttttaagaagccgctagtgaagaaaatatttaatttcaaaaaaaatactaattaattaaatggatataaagtacactctagaaaaaccaaatcattaattgtccagaatgtttgaatgatgaattgcttatggttgatcagttttagtctttctttgttcttttattgttgaaacggatggttaggacattgtctggtgatgatgtgtcacttagcttgtatttacatttgcttacctttaaggtatgtttggataatgaaaaataaggggtgggattgagattgggaaatgaataaagggttggaattaaatggaagtgggagaatgaatggttacgatttaaagatatcttttggtaggtgggaaatcatttccctaacccattagccattgggcccgttcaccgccgtcgggctcctcccgccaccgcgggtgtgctcctcctgccaccgccactggattcgcgtggatccgagtagggggatggccgccgctgctaccttgttcctcctgccggccgactgccacgcgcccctcgccgccttcgatgtccgtcgccctacgctagatccgctgccgaccgccagccaccgcgcgccaccgccaccgccgctgccttgttcctcccgccggccaactgtcgcgctctcctcaccgccttcgtcttccatcgcccaacactggatctactaccacccgggcgccaccttgcaaccaccaccaccgctgcctccttcgatgcatggggagcctgccaccacgcacccactggcctctgccgccgcgctcccgtccgccatccaccgctgtgcgcccgagaattggaaaggagagagttcccgggagagagtttgagagagatagagagagaggagtatgagaggagaggaggagaggaggaggaagagaggagataaggaagaggtaaggagatagagaggggatgacttgaacaaattcgaagtgctaaagagtgaaagaggaggtaactcagacttctaggtggaactttaagaggcccgcctacgaaaatatatttttccatgcggccgattaattggcacatctgaaaaaatagctatatttttgcatacggttccctaagagggatgtctatgaaaatagattttcgtatgcgggtctcttaagaagctgtatgcaaaaatgagggtcgagttatgcagacacatacacttatccgtctgcaacctattgaggtgtttgtctaggaaaaatcaggtgtgtagttgtgacgagcacgttttaagaatgatccaactatcaaggttttaaggatgatgcgtgtggctcaaagcatgtagaaatctttgtttcaattatataggatataTtttttttTCCCAAGTTGCACATAATTCCAAAACTTATAGCCGATGGATATCAATCACAATGAGTTGCTCTAGGAGGTTATTCATATAATCTGTAAGTAGCCACATACATGTCTTAACATGAGCTGCTCATCTATGCTTTGCGCAATCTGCTTGTCTCCTCAAACACATCTACTAGTAAAGAAGGGCTAGTTCTTTTCAGATTTGCATAACCTCCTGTTGCCGCAACAGCATCCATCGCATTTGAAGAGGCCATAAATTCAATGCAAACCTTCTTAAGCTTGTCACAGCTATGCTGATCAGCCAAAGCCAATGTAGTTGCCACATTGTCCACATGAAGACTCTTGCCAAGGATGTGTTGGCAAATCAACTTGAGCCTGTCCATGGCATATCTATCCGCAGCCACAAGTAAATGCCGGATCATCTCAATCTTATCACCTCCCTGAAGGTTCACACACATGTGATTCTTTGATAAGGATCATCTCAATCTTATCACCTCCCTGAATGTTCACACACATGTGATTCTTttgataaccagaagtagacattttttttttgagaaacacagtacgtacgcaggcgctcacaacgtgcgcacactcacccctatgaacgcacacacgcacaccctacccctctcacccctatgaacgcacacacgcacaccctacccctatgagcacctccgaaagactgagccggcatgtcttgagattgacgaagtcaccacaggcgcctcgctgtcaacgggtacgtcgcctaccactgaaagaataattagccgtaaatgcgagcacccgtgtcaaatctaggatttgaacccgggtgggctggttccaccacaaggaacctaaccagttgagctatgctcacttcgcaaccagaagtagacatttaattgtgaggcgattgtccttgatgaagcctgattctggcagctcaagatcgcttcttagcttgaaataggcatgtgaaatgacagttccaaaccgatttttacccctagagctgaacactactggctgtttgttcagggtcaattcccagttggacaagccaggtacctgattaaccaatctgaGggaatacaatgcccggacctcagcattgtcactcataagctcaagatagactgagatgtactctttgtaagcctcacaaactccatcaggatagaagcgaatcgcccagtagaagccaccaacagcgaagatgttcgaccggacaaacttgccaacaccgatgcccttctggaatctgtacccgttgatctcaaatatgtgcccacccacctctgaccctgtggtgcatcttgatgccgtcgtcttggctttggtgattggcgttaaccctgaaagcat
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| CDS seq | atgctttcagggttaacgccaatcaccaaagccaagacgacggcatcaagatgcaccacagggtcagaggtgggtgggcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgtccggtcgaacatcttcgctgttggtggcttctactgggcgattcgcttctatcctgatggagtttgtgaggcttacaaagagtacatctcagtctatcttgagcttatgagtgacaatgctgaggtccgggcattgtattccCtcagattggttaatcaggtacctggcttgtccaactgggaattgaccctgaacaaacagccagtagtgttcagctctaggggtaaaaatcggtttggaactgtcatttcacatgcctatttcaagctaagaagcgatcttgagctgccagaatcaggcttcatcaaggacaatcgcctcacaattaaatGTGATAAGATTGAGATGATCCGGCATTTACTTGTGGCTGCGGATAGATATGCCATGGACAGGCTCAAGTTGATTTGCCAACACATCCTTGGCAAGAGTCTTCATGTGGACAATGTGGCAACTACATTGGCTTTGGCTGATCAGCATAGCTGTGACAAGCTTAAGAAGGTTTGCATTGAATTTATGGCCTCTTCAAATGCGATGGATGCTGTTGCGGCAACAGGAGGTTATGCAAATCTGAAAAGAACTAGCCCTTCTTTACTAGTAGATcgggggatggtgtccaagaagaagaagacggtgtcgaggcacaccacggagtcggaggaaggcaggcactcgttcgagatcgtcgggtacagcctcaagaagggcatcggcgtggacgagttcgtcgaatccgccaccttcgccgtcggcggctacgactggtgcgtccgcttctaccccgacggcaaaggcgatggtgccaagtactacatctcggtctacctcgagctcctgaccaaggactgcgccgtccgggcggcctacgacctgagattggttaatcttgccaccgggttgccaaagagtgtctactctgaaacaactcacaggatgttcaattctgaggacagtagcaaatttgctccgcattacgcgactttcatgcacagaagtcaactggagatggaagcgtcaggctacatcaaggacgatcgcctcacaatcgaatgctttgttaccgtcgtcgtccaggaatcgatggcgtctaataccgtgaaggcccatgaattaatcaaggtgccgccgtcagatatattggaaaattttgtcgaattgttggagaagggggaaggggcggatatcgtccttgcagcacggtcatccgtcttcaaggcggagctctatgggcagatgaaggagaagagggcccggcgggtaaccgtcgaagacatgcagcctgatgttttcaggggcctcctgcatttcatctacaccgattcgttgccggacatggatgatctcagtgatgacgactactatgagttgatcaggcttaataccactgagtgtgggaatatagcagcataa
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| Protein seq | MLSGLTPITKAKTTASRCTTGSEVGGHIFEINGYRFQKGIGVGKFVRSNIFAVGGFYWAIRFYPDGVCEAYKEYISVYLELMSDNAEVRALYSLRLVNQVPGLSNWELTLNKQPVVFSSRGKNRFGTVISHAYFKLRSDLELPESGFIKDNRLTIKCDKIEMIRHLLVAADRYAMDRLKLICQHILGKSLHVDNVATTLALADQHSCDKLKKVCIEFMASSNAMDAVAATGGYANLKRTSPSLLVDRGMVSKKKKTVSRHTTESEEGRHSFEIVGYSLKKGIGVDEFVESATFAVGGYDWCVRFYPDGKGDGAKYYISVYLELLTKDCAVRAAYDLRLVNLATGLPKSVYSETTHRMFNSEDSSKFAPHYATFMHRSQLEMEASGYIKDDRLTIECFVTVVVQESMASNTVKAHELIKVPPSDILENFVELLEKGEGADIVLAARSSVFKAELYGQMKEKRARRVTVEDMQPDVFRGLLHFIYTDSLPDMDDLSDDDYYELIRLNTTECGNIAA |
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| Function | BTB/POZ and MATH domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9M8J9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0007210 | OsNaBo_08g0007210.01 | Chr08 | 8154322 | 8160067 | - | NAM | ||
| CDS seq | atgctttcagggttaacgccaatcaccaaagccaagacgacggcatcaagatgcaccacagggtcagaggtgggtgggcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgtccggtcgaacatcttcgctgttggtggcttctactgggcgattcgcttctatcctgatggagtttgtgaggcttacaaagagtacatctcagtctatcttgagcttatgagtgacaatgctgaggtccgggcattgtattccCtcagattggttaatcaggtacctggcttgtccaactgggaattgaccctgaacaaacagccagtagtgttcagctctaggggtaaaaatcggtttggaactgtcatttcacatgcctatttcaagctaagaagcgatcttgagctgccagaatcaggcttcatcaaggacaatcgcctcacaattaaatGTGATAAGATTGAGATGATCCGGCATTTACTTGTGGCTGCGGATAGATATGCCATGGACAGGCTCAAGTTGATTTGCCAACACATCCTTGGCAAGAGTCTTCATGTGGACAATGTGGCAACTACATTGGCTTTGGCTGATCAGCATAGCTGTGACAAGCTTAAGAAGGTTTGCATTGAATTTATGGCCTCTTCAAATGCGATGGATGCTGTTGCGGCAACAGGAGGTTATGCAAATCTGAAAAGAACTAGCCCTTCTTTACTAGTAGATcgggggatggtgtccaagaagaagaagacggtgtcgaggcacaccacggagtcggaggaaggcaggcactcgttcgagatcgtcgggtacagcctcaagaagggcatcggcgtggacgagttcgtcgaatccgccaccttcgccgtcggcggctacgactggtgcgtccgcttctaccccgacggcaaaggcgatggtgccaagtactacatctcggtctacctcgagctcctgaccaaggactgcgccgtccgggcggcctacgacctgagattggttaatcttgccaccgggttgccaaagagtgtctactctgaaacaactcacaggatgttcaattctgaggacagtagcaaatttgctccgcattacgcgactttcatgcacagaagtcaactggagatggaagcgtcaggctacatcaaggacgatcgcctcacaatcgaatgctttgttaccgtcgtcgtccaggaatcgatggcgtctaataccgtgaaggcccatgaattaatcaaggtgccgccgtcagatatattggaaaattttgtcgaattgttggagaagggggaaggggcggatatcgtccttgcagcacggtcatccgtcttcaaggcggagctctatgggcagatgaaggagaagagggcccggcgggtaaccgtcgaagacatgcagcctgatgttttcaggggcctcctgcatttcatctacaccgattcgttgccggacatggatgatctcagtgatgacgactactatgagttgatcaggcttaataccactgagtgtgggaatatagcagcataa
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| Protein seq | MLSGLTPITKAKTTASRCTTGSEVGGHIFEINGYRFQKGIGVGKFVRSNIFAVGGFYWAIRFYPDGVCEAYKEYISVYLELMSDNAEVRALYSLRLVNQVPGLSNWELTLNKQPVVFSSRGKNRFGTVISHAYFKLRSDLELPESGFIKDNRLTIKCDKIEMIRHLLVAADRYAMDRLKLICQHILGKSLHVDNVATTLALADQHSCDKLKKVCIEFMASSNAMDAVAATGGYANLKRTSPSLLVDRGMVSKKKKTVSRHTTESEEGRHSFEIVGYSLKKGIGVDEFVESATFAVGGYDWCVRFYPDGKGDGAKYYISVYLELLTKDCAVRAAYDLRLVNLATGLPKSVYSETTHRMFNSEDSSKFAPHYATFMHRSQLEMEASGYIKDDRLTIECFVTVVVQESMASNTVKAHELIKVPPSDILENFVELLEKGEGADIVLAARSSVFKAELYGQMKEKRARRVTVEDMQPDVFRGLLHFIYTDSLPDMDDLSDDDYYELIRLNTTECGNIAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0007210 | OsNaBo_08g0007210.02 | Chr08 | 8154146 | 8155436 | - | IsoSeq | ||
| CDS seq | gggcaaaatataaaaattcactgcctagggtttgatgtaggagatcgaagaggcgtctcctcgccgtcgtcgctcaccatcttccgccgcaaccgccgccgccgatcgcctctgccctcgacgcacgcaagcgggggatggtgtccaagaagaagaagacggtgtcgaggcacaccacggagtcggaggaaggcaggcactcgttcgagatcgtcgggtacagcctcaagaagggcatcggcgtggacgagttcgtcgaatccgccaccttcgccgtcggcggctacgactggtgcgtccgcttctaccccgacggcaaaggcgatggtgccaagtactacatctcggtctacctcgagc
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| Protein seq | GQNIKIHCLGFDVGDRRGVSSPSSLTIFRRNRRRRSPLPSTHASGGWCPRRRRRCRGTPRSRRKAGTRSRSSGTASRRASAWTSSSNPPPSPSAATTGASASTPTAKAMVPSTTSRSTSS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.359160 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0226000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g12970 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0226000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0007430 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0007500 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0007610 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0007620 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0007440 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0125800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0007400 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0117000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0007040 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0007120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0007010 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0007620 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0007090 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G007390 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0007250 | RBH | 0.0 | 0.0 | 0.000000 |
