Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_07g0001700 OGI:07004070 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr07:1361224-1366779
Gene Symbol PR1-71, OsPR1#071, OsPR1-71, -
DNA seq

atatcgcatcagcattcaacgaacacacacacaatcggaatcgattaagagagcaaattgtgtagtagtgttgcatatggagacaccaaagatatcgggagtagcacttgcggcagccattgccgtcgttctggccatggcgaccacgccggcggtggcgcagaactcgccgcaggacttcgtggacctccacaacgcggcgcgacgcgtggagggcgtcggcgaggtggtctgggacgacgccgtggcggcgtacgcggagaactacgcggcggagcgcgccggcgactgcgcgctcatccactccggcagctgggagaaggccggctacggcgagaacctcttcggaggctccggcagcgagtggacggcagcggacgccgtcaacagctgggtgggggagaaggatctgtacgactacgacagcaacagctgcctggggtcgtgggactcgtgcctccactacacgcaggtgatgtggagccgcacgacggcgatcggctgcgcccgcgtggactgcgacaacggcggcgtcttcatcacctgcaactacaaccccgccggcaacttccagggagagcgccccttcgagcgtggcctcactctctctgcttaataagttattaatattttactttaactatgtacgtgataatattatgtatggagtcgtatgatataaatgtgtgaaataataattacgggaatcttatatatatatgtacgttgtcgttggaataaaagaagaaaataaatgagaaaattaattccattggctgcatgtaatttgaaaggacgaccctacaatcagagactgggtggtgctgtggtggaacagtcctagtggcctgtcaaggggaaattaattaagattctgagaagcatctggttagtagacaacttttgaggatctctaaaagttggttttccagcttctaatttcttgttcattttctgaattctaggcctatttggcatagttcatcaccagctccacctctcctaaaactggagctcagccaaacagtttcagctccacctaatgggagcgaagctgggtggagcgctctcacaaaatgaactagagatgtggagctgtgtttagtcagctccacaactccactccagacctaactcatggagttaaatttagaagtttgagctctatcatacaactacagcttcttagaatatgtaccaaaagctgtactgtttgggaggagtttctgattctgggagaagctgcagcagctggaagctcccccaaacaagccctaggtgtctatttgggaaaaacttttagcagctacaacttatctcagaatatttagctctccctaaacaattcagattgtcatccacattataagaatttgtagtagatatataattcagaaaataaactagaacagaaatttggaaaactaactttttcatactctcatgaaccgagaacaaatctgttaattctcataattttaattttaagctctacctaaaagaatttaacatgtgggctgacctatgttgggaaactaccaattggggccaagtttgaataggcttcatctggtccaacgaattacagcccacacacatgcatgcatgagctaagcgatgaggccaatctaaggccttcatcaggctaggcttgaagcccgtgaggatagggtgagaaactcctatggcgcgatctatctcctggggcgatcggttcccctgccccacacggttttttttttagcaccactttactttcctgttttactaaatttatactttaaagtttatacatatcaagtttacatacttaaagtttatatacttatagacctaaaatttgtaagtcaaaagtttatatatcatattcaaattcatctttaaatgtatttgaatttaaatacattttgaatcagcatataaacttttgacctataaaagatgtgtaaactctagatgtataaatttaggtatataaactttgaatgcatatgtattggaaatttgaataactaggaaggtagcccgcgcatatgcgcaggcacttatttaatgttgcttgaatttgttttacgaatgtttacgtgtagatgatgtttttaaaatagatcttgactctattttaaatatgttttcattaatatctagtttggatatattacttggaaccgtacaaccttgaatttaattAaaaaaacatgtgtcacgataatagaatactggagttgtttcatatcaacttgtactatacatgattttttttaaccaagataaagggtttttgtAaaaaaaaactaccacaataatctctaaagcatcgtattgttggttatattttgagaaatatctataattttttgttttatttttttcaacacctattattcataatcacatgagacacctttactaattaatttagagaataaatctattttcccaaacttatttacaataactaatttattgaagtatactttatagttacgtcaatagtgtgtataatatacatccatcaaattgatacttgatgtgttggaattcctcaactataaaaaaaattatatcatgagtagtttattgcgcatgttacttgattgttcatttattgccaaaactatttagcaaagagaaaaacatagatatatgaccataaatctcatggtggattaaatggttgtattatagcaagatcattggtatgaaatattttttcatattttttttacatctatgcaacatttatgttgcccacttattagatactaatgaaatagttctaaagattccAaaaaaaattgaaaatcttagtctcaaacaaattaaaattaaatcaaatatacttaaaaatacacaactaaattgtgttgttttcatttattttacatatatagatttaaattagcattgtatagtcgtcaagtgatatttgacacatgaaatatgatgtgaaattatttaaaataggaaaaagtactaattaccccctaaacctgaaaaccagacatctttcaccctcaactattaatactggacgaattacccctaactcaacccggagtggttttgttcctacgtgacagtccagttagcacttttttttaaaaaaaggtggggcttacctgtcacactctctaccctctctatctctctctcccccctctctctctcttctccttctccttgctacaggggccaaccgagtaggcgagccgtcgccccgccgctcttttccttcctccttcatctattcccctgcacttgttctcttaattgatccaccttgttgttctttgattgattggtgctttctgtctcgtcaggagagaggcattggtggtggggatcgtttaagaaccatggtgggatggcatgctgtggtagacagagctacaggggcatagccgaagctggccatggaggaccagtgcaggtgctcgcttccggcggccatcacgtgatgatgagatgtgacggaaatgatggagaagggaccagtgcaggtgctcgcttccggcggccatcacgtgatgatgagatgtgacggaaatgatggagaagacagcctccatcagactgcgcatgtggtggccgagatagccgaggagtcgcctccgctactcaccgccctcattcgcctccaccgcgattgtcctcttcacgtgccagtggatgttgaggagaagccacacggccatcaaggaggtgcgcgccagcggagaccgaggaggacccgctcactgcccctagccttgcctattgatagacatggaaggagaagaaagagagagggagaggggtgaggtagagatatgataggtgggttccaccaatttatttttaagaaaatgctaacgggattgccacgtcggatcaaaaccacttcaggctatgtcagcggggtaattcgtccggtattaatagttgagggtgaaagatgtctagctttcagatttatgggggtaattccgtcgaccataatagtttaggagggtaattcgtccttttaccttgaaaatattatcataacattatttattatatgtcagcctcatgtgttatgatgtatttagaaacatagacatcaatagtttatttaattaaaggaatctgactggatcacaaattagatatataattttaaaataatttaatgataggatatttttttatattgtagaagatatagtttaacttaattttatagagtattatatttttttatatagtagaaaatcatatattatggaccatcgatttttttatggcactacatactacctatgttacgtaatttttttactttattgattttatcgtcaattcgtacgtaggttttctttaagcttcattgattcttttccaacacgtaattagtacgtacacgaagtatacttatatttggtttcttttttcggcccacgttatgagaggaaattataaccttcttaaaataatacatctaatctaacgatctaaaatatcgggtccaccaatttaagtgaaaatcaacggtgagattaaatagtgccacgtggcggtctaggagtatttgtaggaacaccacatgacggcttaagagcgtttctaggaagtttaatggacttttagtatataatagatgatgtggtttaatgcatgttgagctattggtataggatatattaaataagccagaaaaataaattaacatcaagttgcattcactacctgcccagatgaagaaagtatgcagctgagctgtgtgccaaagactattaaagtacagtgtgaatacatgcatggaaagtttgcgacaattgaccacttaattatatttagtggaagtaattaacatctactagaagcaacgtgacagtgcaggaccaagtctaaagtctttccaacctcgatctctcgtaatcgagctaagctatagctctcatgcatttagctgctataaatacctcagcaagcaacaagtctcagcacaagacattaattaattagcttgagaaactcatctgctggatcgagcttctctgttaattaatggcgtcgaaagcctttgcactcgtgctgctggcggcggcgacgctcgccatggcggccagcacggcggcggcgcagagctcgccgtaggacttcctcgacgcccacaacgacgcccgccgcggcgagggcgtcggcctccccgacgtggtgtggaacacgacgctgcaggcgttcgcggagagctacgtggcggtgctcgccgccacctgcagcctcgaccactcgaacagcgtgcagctgggctacggcgagaacctgtacggcccggcggccgccggcagcagcgcgtcgacggcggcggccgcggtggggaaatggatggaggagaaggcggactacgtgtacagcagcaacacgtgcacgagaggggcgctgatcaagtgcggccactacacgcagatcgtgtggcggagcacgacgtcgatcggctgcgcgagcgccgcctgcagcaacggcggcggtgtcatcatcagctgcaactatttcccgcccggcaactaccccgatcagcgcccttactag

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CDS seq

atggagacaccaaagatatcgggagtagcacttgcggcagccattgccgtcgttctggccatggcgaccacgccggcggtggcgcagaactcgccgcaggacttcgtggacctccacaacgcggcgcgacgcgtggagggcgtcggcgaggtggtctgggacgacgccgtggcggcgtacgcggagaactacgcggcggagcgcgccggcgactgcgcgctcatccactccggcagctgggagaaggccggctacggcgagaacctcttcggaggctccggcagcgagtggacggcagcggacgccgtcaacagctgggtgggggagaaggatctgtacgactacgacagcaacagctgcctggggtcgtgggactcgtgcctccactacacgcaggtgatgtggagccgcacgacggcgatcggctgcgcccgcgtggactgcgacaacggcggcgtcttcatcacctgcaactacaaccccgccggcaacttccagggagagcgccccttcgagccctttgcactcgacttcctcgacgcccacaacgacgcccgccgcggcgagggcgtcggcctccccgacgtggtgtggaacacgacgctgcaggcgttcgcggagagctacgtggcggtgctcgccgccacctgcagcctcgaccactcgaacagcgtgcagctgggctacggcgagaacctgtacggcccggcggccgccggcagcagcgcgtcgacggcggcggccgcggtggggaaatggatggaggagaaggcggactacgtgtacagcagcaacacgtgcacgagaggggcgctgatcaagtgcggccactacacgcagatcgtgtggcggagcacgacgtcgatcggctgcgcgagcgccgcctgcagcaacggcggcggtgtcatcatcagctgcaactatttcccgcccggcaactaccccgatcagcgcccttactag

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Protein seq

METPKISGVALAAAIAVVLAMATTPAVAQNSPQDFVDLHNAARRVEGVGEVVWDDAVAAYAENYAAERAGDCALIHSGSWEKAGYGENLFGGSGSEWTAADAVNSWVGEKDLYDYDSNSCLGSWDSCLHYTQVMWSRTTAIGCARVDCDNGGVFITCNYNPAGNFQGERPFEPFALDFLDAHNDARRGEGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNSVQLGYGENLYGPAAAGSSASTAAAAVGKWMEEKADYVYSSNTCTRGALIKCGHYTQIVWRSTTSIGCASAACSNGGGVIISCNYFPPGNYPDQRPY

Function Pathogenesis-related protein 1 [UniProtKB/Swiss-Prot:Q05968]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_07g0001700 OsNaBo_07g0001700.01 Chr07 1361300 1366779 + NAM
CDS seq

atggagacaccaaagatatcgggagtagcacttgcggcagccattgccgtcgttctggccatggcgaccacgccggcggtggcgcagaactcgccgcaggacttcgtggacctccacaacgcggcgcgacgcgtggagggcgtcggcgaggtggtctgggacgacgccgtggcggcgtacgcggagaactacgcggcggagcgcgccggcgactgcgcgctcatccactccggcagctgggagaaggccggctacggcgagaacctcttcggaggctccggcagcgagtggacggcagcggacgccgtcaacagctgggtgggggagaaggatctgtacgactacgacagcaacagctgcctggggtcgtgggactcgtgcctccactacacgcaggtgatgtggagccgcacgacggcgatcggctgcgcccgcgtggactgcgacaacggcggcgtcttcatcacctgcaactacaaccccgccggcaacttccagggagagcgccccttcgagccctttgcactcgacttcctcgacgcccacaacgacgcccgccgcggcgagggcgtcggcctccccgacgtggtgtggaacacgacgctgcaggcgttcgcggagagctacgtggcggtgctcgccgccacctgcagcctcgaccactcgaacagcgtgcagctgggctacggcgagaacctgtacggcccggcggccgccggcagcagcgcgtcgacggcggcggccgcggtggggaaatggatggaggagaaggcggactacgtgtacagcagcaacacgtgcacgagaggggcgctgatcaagtgcggccactacacgcagatcgtgtggcggagcacgacgtcgatcggctgcgcgagcgccgcctgcagcaacggcggcggtgtcatcatcagctgcaactatttcccgcccggcaactaccccgatcagcgcccttactag

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Protein seq

METPKISGVALAAAIAVVLAMATTPAVAQNSPQDFVDLHNAARRVEGVGEVVWDDAVAAYAENYAAERAGDCALIHSGSWEKAGYGENLFGGSGSEWTAADAVNSWVGEKDLYDYDSNSCLGSWDSCLHYTQVMWSRTTAIGCARVDCDNGGVFITCNYNPAGNFQGERPFEPFALDFLDAHNDARRGEGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNSVQLGYGENLYGPAAAGSSASTAAAAVGKWMEEKADYVYSSNTCTRGALIKCGHYTQIVWRSTTSIGCASAACSNGGGVIISCNYFPPGNYPDQRPY

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_07g0001700 OsNaBo_07g0001700.02 Chr07 1361224 1361959 + IsoSeq
CDS seq

atcgcatcagcattcaacgaacacacacacaatcggaatcgattaagagagcaaatt

Protein seq

IASAFNEHTHNRNRLREQI

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 1304.566284 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0124900 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g03279 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0127700 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0001650 RBH 0.201245 2083.232178 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0001670 RBH 0.0 149.281891 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0001550 RBH 0.0 2537.416016 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0001600 RBH 0.086808 27.265078 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0001590 RBH 3.452589 583.380737 1.495711
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0022500 RBH 1.1974 708.0752565 3.6619435
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0001640 RBH 0.0 162.529724 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0021600 SBH 0 0.2369055 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0001690 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0001760 SBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0001740 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0001790 RBH 0.0 1.404782 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0001730 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G001770 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0001720 SBH 0.0 9.471693 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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