Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_06g0025160 | OGI:06076960 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr06:28167960-28171595 | ||||||||
| Gene Symbol | OsSTA177 | ||||||||||
| DNA seq | ctacgaggagtgggagcgcgacgcctcgccgccgccgccgccgctggccacggacgaggcggcgctgctgtcgtcggcgccggcgccggcgtcgcgttcccggagctcctcgatgcgggcgagggcatccctgaggtcccatcgcttgtccacgtcgctctcgcagcagccgaggccgaccttgagcagcttcaccatctcgccctcgccgccgcgcgcgccgcgcatctcctggtcgaacacctcgccggtccactcctcccgcaccaccgagtgcacccaccccgccaggtccgtccccgtccgcccctgccggtggtagttcgccgggaacttgccggtgagcacctccagtatcaggatccccaggctccacacgtcgctcttcttgctcggcctccccgtctccccgcactccggcgacttgtacgccaccatcacctgcaaacacgaaccatccccagtcaatgcgtgccggcctatacgccgcgggcgttcgtcgccgccgccgtcgttcgatcgcctcacctgcgcggcgtggcgcggcgtcatgacggggacgagggcgtagtcgctgaggatgggctcgaacgcagcgtcgaggaggacgttcgacgacttgaggtgtccgtgcggcacggtgagcatcggcagctcgtcgtacaggtgcgccagcccgcgcgtcacgcccttgatgatcttgagccgccgcggccagtccagcgccgccatgctcgaccctgcacgtacgccaccgatcacgcgtcgccggcgacattaacataaatcaaataaatgcaatgcaggtgtgtcaagatgggaaggattgtgtggttaattacctccatggaggaggtgagccaagctgccattgaccatgtactcggtgacgaacagcttctcgtccttcttgtagaggtaggcgacgacggggaggaggttggggtggacgaggcggccgagccgccgcatgtgctcgttgaagtcctgcctcccgacgccgttcatctccttgaaccgcttcaccaccatggactggccttccaccagcgtcgccttgtacgacgcgccgaagttgccgctgccgagcacctctgccgacgcccggagcaggtcctccagctcgaacctctccctcccctcctggatgaacaccagccgcccgtggtcgtcccgccgcccgccgcgcttcgccggcacggccgacaccgtcacgtgcggctgctgctcgccgccaccgccgccgccgccgtgtgcgacggtgacggccggattgggcgtggccttcatcctggcggcgtcggcgttggcggcggcgccgccgacgccgccgccctgggtttcggtggtggcctcgcggcggcgggcgagcatcgccgtcaacgcgccggcgaatgccaggagcgcgccgacgacgaccacgacgagggcgatgatcatgaggatcttcaagctgcgaggcgaccaccacgacgacgacagcggcgatggcgaaggtgacgcgaggattggcacttcggggcacggggcgccgaccggcgggccgcagagatttttgtttcctgaatatttccatggggagaggtttggatcagatggtgcatgagcaaaaaataaactaattttagaggactttattttggagaaattgaactaaattggtgttttccaaagtacccaagcagtacgaattgatgtgctcgacaaatactccatcggtctcaaaataagattgttttcgctccctcttgtttgtcccaaaataagttcatctttaagctatcattgtatttttgtttgtaaaagtaaaagacaaatgaattgtagtagagatagtatgggacagttgcatggatattttataaagtgacagtattttaatcttttgtttttatattggtatatatatcatatatgtatgggaagggtgaaaaataaacttattttagaacaacagtggtatcatggtatgttgtataatccgtttttgttggatttttggaggaattgaactaattcgtgcgaaaatcctatgaaatcatgcgttcacaagtagcccaaacagtgcgaccaatcaagggtttggatttttgattgaatcgatgtgcttgataaatatgctctatagtttttgttcttccaaaaaagaagaattataaaggtagaatattgcaatgcattcaggaatactgcaatttggtgtacactagcaaaaggatagtattatattacagtgcactaatctaatacttttatgtggttagtttaattagcacgtttgatcatgttggatgttgacttctgagtttaacatcttcatgtaagtgtttcttaattggtcatgacgtactgtacaacctcgaaagagccacttacagtagttggtaggaatagtactttgttttattttgtatttacatagttcttgcagcccattttattcttggattctgagacagtgagacatcaatctggatttgcttaaagaaatccttaattgactagacaaatgtgtaaaacagcaacatatgaaagttgggtaaaattttgaattttcgtggtatatttttcaaacaggtaaacggtatgtttggtgcgaaaactttctatatgaaagttgctctaaaatatcatatcaatctatttttcaagtttgtaataattaaaacttaattaatcatacattaataccacctcgttttacataaaaaaaattaatcttcatcttcaggagaaaagaacaccaccatgatctcaacaaaattccattactccctaaatcctattattgatcgcatgttctgtcctaattgcaaatcaaacatgtactagtccagtaattcactaggaattcgtgcatgcacgaatgcatgaacaggcaggtagcaaaaattcaccattttttaattaaaaaatgtataaattcaccataatttgctcaccttggaacgatttggcgtcgaaccgccggaggcccggcgggatggggccggagaggttgttgtcggagacgtcgacgaggcgcagctccttctggttgaagtccggcagggggccgtcgaagcggttcttggagagctgcaggacgagcagcttgggcgaggtgatggaggtcgggatcgggccggtgaacgcgttgtcggagaggaagagcttgcggaggcccctcatgtgcgcgaacgcggcgggcgggatgccgccgtcgagcttgttccgcgacatgtacagcatcttgagcgccgggagcatggacacgtcggggaacggccccgtgaggttgttgttggcgatgctgagggcgcggagcccccggagcgcggcgagcggcgccatgtccggggcggggccctggaggccgaggtactcgaggcggaggccgcgcacctgccccgtccgctggtggcatgtcacgccgtaccacagcgacacgccggtgccggcgccggcgcaggggccgggggtggtggtggcccactggctgagcggctccggcggcgcgccgtgcggcccccgcagcgccccccggaacgccagcagcgtggcggcctccggccccccggcggccgccgccgcggcgagggcgagcgccgccgcggcctgcaggaggaggaggcgcacggcggcgacgccggccat
More
|
||||||||||
| CDS seq | atggccggcgtcgccgccgtgcgcctcctcctcctgcaggccgcggcggcgctcgccctcgccgcggcggcggccgccggggggccggaggccgccacgctgctggcgttccggggggcgctgcgggggccgcacggcgcgccgccggagccgctcagccagtgggccaccaccacccccggcccctgcgccggcgccggcaccggcgtgtcgctgtggtacggcgtgacatgccaccagcggacggggcaggtgcgcggcctccgcctcgagtacctcggcctccagggccccgccccggacatggcgccgctcgccgcgctccgggggctccgcgccctcagcatcgccaacaacaacctcacggggccgttccccgacgtgtccatgctcccggcgctcaagatgctgtacatgtcgcggaacaagctcgacggcggcatcccgcccgccgcgttcgcgcacatgaggggcctccgcaagctcttcctctccgacaacgcgttcaccggcccgatcccgacctccatcacctcgcccaagctgctcgtcctgcagctctccaagaaccgcttcgacggccccctgccggacttcaaccagaaggagctgcgcctcgtcgacgtctccgacaacaacctctccggccccatcccgccgggcctccggcggttcgacgccaaatcgttccaaggaaacaaaaatctctgcggcccgccggtcggcgccccgtgccccgaagtgccaatcctcgcgtcaccttcgccatcgccgctgtcgtcgtcgtggtggtcgcctcgcagcttgaagatcctcatgatcatcgccctcgtcgtggtcgtcgtcggcgcgctcctggcattcgccggcgcgttgacggcgatgctcgcccgccgccgcgaggccaccaccgaaacccagggcggcggcgtcggcggcgccgccgccaacgccgacgccgccaggatgaaggccacgcccaatccggccgtcaccgtcgcacacggcggcggcggcggtggcggcgagcagcagccgcacgtgacggtgtcggccgtgccggcgaagcgcggcgggcggcgggacgaccacgggcggctggtgttcatccaggaggggagggagaggttcgagctggaggacctgctccgggcgtcggcagaggtgctcggcagcggcaacttcggcgcgtcgtacaaggcgacgctggtggaaggccagtccatggtggtgaagcggttcaaggagatgaacggcgtcgggaggcaggacttcaacgagcacatgcggcggctcggccgcctcgtccaccccaacctcctccccgtcgtcgcctacctctacaagaaggacgagaagctgttcgtcaccgagtacatggtcaatggcagcttggctcacctcctccatggagggtcgagcatggcggcgctggactggccgcggcggctcaagatcatcaagggcgtgacgcgcgggctggcgcacctgtacgacgagctgccgatgctcaccgtgccgcacggacacctcaagtcgtcgaacgtcctcctcgacgctgcgttcgagcccatcctcagcgactacgccctcgtccccgtcatgacgccgcgccacgccgcgcaggtgaggcgatcgaacgacggcggcggcgacgaacgcccgcggcgtataggccggcacgcattgactggggatggttcgtgtttgcaggtgatggtggcgtacaagtcgccggagtgcggggagacggggaggccgagcaagaagagcgacgtgtggagcctggggatcctgatactggaggtgctcaccggcaagttcccggcgaactaccaccggcaggggcggacggggacggacctggcggggtgggtgcactcggtggtgcgggaggagtggaccggcgaggtgttcgaccaggagatgcgcggcgcgcgcggcggcgagggcgagatggtgaagctgctcaaggtcggcctcggctgctgcgagagcgacgtggacaagcgatgggacctcagggatgccctcgcccgcatcgaggagctccgggaacgcgacgccggcgccggcgccgacgacagcagcgccgcctcgtccgtggccagcggcggcggcggcggcgaggcgtcgcgctcccactcctcgtag
More
|
||||||||||
| Protein seq | MAGVAAVRLLLLQAAAALALAAAAAAGGPEAATLLAFRGALRGPHGAPPEPLSQWATTTPGPCAGAGTGVSLWYGVTCHQRTGQVRGLRLEYLGLQGPAPDMAPLAALRGLRALSIANNNLTGPFPDVSMLPALKMLYMSRNKLDGGIPPAAFAHMRGLRKLFLSDNAFTGPIPTSITSPKLLVLQLSKNRFDGPLPDFNQKELRLVDVSDNNLSGPIPPGLRRFDAKSFQGNKNLCGPPVGAPCPEVPILASPSPSPLSSSWWSPRSLKILMIIALVVVVVGALLAFAGALTAMLARRREATTETQGGGVGGAAANADAARMKATPNPAVTVAHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELEDLLRASAEVLGSGNFGASYKATLVEGQSMVVKRFKEMNGVGRQDFNEHMRRLGRLVHPNLLPVVAYLYKKDEKLFVTEYMVNGSLAHLLHGGSSMAALDWPRRLKIIKGVTRGLAHLYDELPMLTVPHGHLKSSNVLLDAAFEPILSDYALVPVMTPRHAAQVRRSNDGGGDERPRRIGRHALTGDGSCLQVMVAYKSPECGETGRPSKKSDVWSLGILILEVLTGKFPANYHRQGRTGTDLAGWVHSVVREEWTGEVFDQEMRGARGGEGEMVKLLKVGLGCCESDVDKRWDLRDALARIEELRERDAGAGADDSSAASSVASGGGGGEASRSHSS |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 [UniProtKB/Swiss-Prot:C0LGR9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_06g0025160 | OsNaBo_06g0025160.01 | Chr06 | 28167960 | 28171595 | - | NAM | ||
| CDS seq | atggccggcgtcgccgccgtgcgcctcctcctcctgcaggccgcggcggcgctcgccctcgccgcggcggcggccgccggggggccggaggccgccacgctgctggcgttccggggggcgctgcgggggccgcacggcgcgccgccggagccgctcagccagtgggccaccaccacccccggcccctgcgccggcgccggcaccggcgtgtcgctgtggtacggcgtgacatgccaccagcggacggggcaggtgcgcggcctccgcctcgagtacctcggcctccagggccccgccccggacatggcgccgctcgccgcgctccgggggctccgcgccctcagcatcgccaacaacaacctcacggggccgttccccgacgtgtccatgctcccggcgctcaagatgctgtacatgtcgcggaacaagctcgacggcggcatcccgcccgccgcgttcgcgcacatgaggggcctccgcaagctcttcctctccgacaacgcgttcaccggcccgatcccgacctccatcacctcgcccaagctgctcgtcctgcagctctccaagaaccgcttcgacggccccctgccggacttcaaccagaaggagctgcgcctcgtcgacgtctccgacaacaacctctccggccccatcccgccgggcctccggcggttcgacgccaaatcgttccaaggaaacaaaaatctctgcggcccgccggtcggcgccccgtgccccgaagtgccaatcctcgcgtcaccttcgccatcgccgctgtcgtcgtcgtggtggtcgcctcgcagcttgaagatcctcatgatcatcgccctcgtcgtggtcgtcgtcggcgcgctcctggcattcgccggcgcgttgacggcgatgctcgcccgccgccgcgaggccaccaccgaaacccagggcggcggcgtcggcggcgccgccgccaacgccgacgccgccaggatgaaggccacgcccaatccggccgtcaccgtcgcacacggcggcggcggcggtggcggcgagcagcagccgcacgtgacggtgtcggccgtgccggcgaagcgcggcgggcggcgggacgaccacgggcggctggtgttcatccaggaggggagggagaggttcgagctggaggacctgctccgggcgtcggcagaggtgctcggcagcggcaacttcggcgcgtcgtacaaggcgacgctggtggaaggccagtccatggtggtgaagcggttcaaggagatgaacggcgtcgggaggcaggacttcaacgagcacatgcggcggctcggccgcctcgtccaccccaacctcctccccgtcgtcgcctacctctacaagaaggacgagaagctgttcgtcaccgagtacatggtcaatggcagcttggctcacctcctccatggagggtcgagcatggcggcgctggactggccgcggcggctcaagatcatcaagggcgtgacgcgcgggctggcgcacctgtacgacgagctgccgatgctcaccgtgccgcacggacacctcaagtcgtcgaacgtcctcctcgacgctgcgttcgagcccatcctcagcgactacgccctcgtccccgtcatgacgccgcgccacgccgcgcaggtgaggcgatcgaacgacggcggcggcgacgaacgcccgcggcgtataggccggcacgcattgactggggatggttcgtgtttgcaggtgatggtggcgtacaagtcgccggagtgcggggagacggggaggccgagcaagaagagcgacgtgtggagcctggggatcctgatactggaggtgctcaccggcaagttcccggcgaactaccaccggcaggggcggacggggacggacctggcggggtgggtgcactcggtggtgcgggaggagtggaccggcgaggtgttcgaccaggagatgcgcggcgcgcgcggcggcgagggcgagatggtgaagctgctcaaggtcggcctcggctgctgcgagagcgacgtggacaagcgatgggacctcagggatgccctcgcccgcatcgaggagctccgggaacgcgacgccggcgccggcgccgacgacagcagcgccgcctcgtccgtggccagcggcggcggcggcggcgaggcgtcgcgctcccactcctcgtag
More
|
|||||||
| Protein seq | MAGVAAVRLLLLQAAAALALAAAAAAGGPEAATLLAFRGALRGPHGAPPEPLSQWATTTPGPCAGAGTGVSLWYGVTCHQRTGQVRGLRLEYLGLQGPAPDMAPLAALRGLRALSIANNNLTGPFPDVSMLPALKMLYMSRNKLDGGIPPAAFAHMRGLRKLFLSDNAFTGPIPTSITSPKLLVLQLSKNRFDGPLPDFNQKELRLVDVSDNNLSGPIPPGLRRFDAKSFQGNKNLCGPPVGAPCPEVPILASPSPSPLSSSWWSPRSLKILMIIALVVVVVGALLAFAGALTAMLARRREATTETQGGGVGGAAANADAARMKATPNPAVTVAHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELEDLLRASAEVLGSGNFGASYKATLVEGQSMVVKRFKEMNGVGRQDFNEHMRRLGRLVHPNLLPVVAYLYKKDEKLFVTEYMVNGSLAHLLHGGSSMAALDWPRRLKIIKGVTRGLAHLYDELPMLTVPHGHLKSSNVLLDAAFEPILSDYALVPVMTPRHAAQVRRSNDGGGDERPRRIGRHALTGDGSCLQVMVAYKSPECGETGRPSKKSDVWSLGILILEVLTGKFPANYHRQGRTGTDLAGWVHSVVREEWTGEVFDQEMRGARGGEGEMVKLLKVGLGCCESDVDKRWDLRDALARIEELRERDAGAGADDSSAASSVASGGGGGEASRSHSS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.546597 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0663000 | RBH | 0.0 | 0.0 | 1.404476 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45240 | RBH | 0.0 | 0.0 | 0.429396 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0663000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025340 | RBH | 0.0 | 0.0 | 0.437939 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025150 | RBH | 0.0 | 0.461801 | 0.882557 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025320 | RBH | 0.0 | 0.0 | 2.061794 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0024900 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025390 | RBH | 0.0 | 0.000000 | 0.522050 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0429100 | RBH | 0.004913 | 0.085921 | 0.011308 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024890 | RBH | 0.0 | 0.222157 | 0.457271 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0460000 | SBH | 4.4097055 | 8.267395 | 3.033364 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025290 | RBH | 0.0 | 0.056254 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025300 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024940 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025530 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025190 | RBH | 0.0 | 1.280395 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025050 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0005720 | RBH | 0.0 | 0.000000 | 0.000000 |
