Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_05g0029240 | OGI:05080680 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr05:30703251-30715889 | ||||||||
| Gene Symbol | SMC5 | ||||||||||
| DNA seq | agggcaatgaaaatgtcagtcggtgttatccccctcgacaattcaagtagatatattttgcgattggaaccggccttcatcaaacgataaaacctggttgggaacatgtcacgattttagcgccactttgtcctatgaagtccctgagttaacgacatgccgaagggtcagccagtagctgtttaaaccaccactgcaataaacaaagcacaaaaggcagctggctagcagtccagcacattggagcttctggtttttggacttaatttatctacatggggtacaagcaaagatcacattgaataccctgaagcttccgcgtaaaacgattgacttttgaagaatcgcttgcgaagtgcagtactcaaatccgtatttgaccatcagtgcccactcacgctcattactgttctccagcaatcaccggtgctccaggctgcaaagcatgcatcaaatatggattgagaccgagaatatgctaaaatgtctaaggggatgtttagatccaggagtgtaaagttttgacgtgtcatatcaggtattatataagatatcgcatgaggtgtttgggcacaaacaaaaaactaattacaaaatccgtcagtaaaccgcaagacgaatttattaagcctaattaatccgtcattggtaaatgtttactgtagcaccacattgttaaatcatggatcaattaggcttaaaagatttgtctcgcaaattagtcgcaatctgtgcaattagtcatatttttagcctatatttaatacttcatgcaggtgttcaaacgttcgatgtgacagggtgaaaaattttagtgtgggatctaaacagggcctaagtacagaacacatattacctttagctggcttctcaatccatgggccattcatgatatttaggatgctgcatgcatcactatattccaaatcaggcagcaacttgggcgtcaggaggaagcacctatagccagattaagaaacatgggagttggtagatgctatctgaaaatgcctcctgaaatgctaagagtactgtcacaaactgtggagtgtttggctgactggctgctctcacaagctgctggaacatcttcctctcgtttatgggatccattcctgcaatttcggggaaacagttacctttgtaatgcttcaacaaactagtaatcattttataacagcattgagtgcatagggaacaaaaacttgtgagggttggcttgccttgatttatctcatcaacgacccgaaaggggcagttggtaagatcttgaagtgatacaaggtacaggatggttgaaactgatcgctcctataaaggagcaaaaaataatagtaagtataaggcatatttttctagaatgcatctaatagtttttttcatacccctccagattggtgatgagcgctcaacacctgcaactgacctgtttgcctgaggaaaataatgccacaatttgattaaaaaccacaaaataaggccaacagaaaccttgtggaaacccttaaactacaggctacagtagaagcaggctgaactatggaattaaacactgcgggatgaacatggctagaaacaggcaacaaaagacgggttacaggaccatccaaatagcacctttaatgataaaataatcggtaacgccattctaatcttgagtagatgttaaatgctccctcggttccatattgtaatatgttttaagtttgtcaaagtttgaccaagttcatagaaaaatgtatctacgtttctgacacaaaacaaatatattacaaaagtatattcggtggtggatttaatgaaaccaatttgctgttgtagatgttgctacgttttttttataaacttagtcaaagtttgacataggatgaaacctaaaacatcttacaatatggaacaaagggagtagaacataatagtcacagataaatagcaaataaaagatctcatgattgaagtatggagttacaaataagaacacctggctaatgactaagatctctcccatgttagaagacaacagagctattctcgtgaaagtaatagttcaagtgctactggcatgaggtatcactagaagtctaagaaagatagaatccacagaaaacaaaagatctgagagcacatcggaattcaatacaaatgaacagagtgttttatacttcaccttttatccttcttaacatatacatttgatgatcacttatcatcatataatgtatgagtgcaacctagaaataatcaagttaccctatactataactcagtgatttgtaagactgttctctgcttactggtcatatctgtttaaccacggatagcagtccctagtttggttgccatcaggaaatagtaccactactccatcagtgatggacaagtagtgtacttatcattatttacttaattgcaagaaatcagagcagtgctctcaattaggaaaagaaactcacctaaacttgacctttataaggatgccatattgctcaaaatcaagaccatgttcatctgcaggaaatttggtacagattggtatgccatctgaaaatagtacaaataacagtgtgataacacaaaaaaggaactgccacacataccaagtgaaacttctccagcaacagccatttcttgaaagttacgactaaacgtgctgtttatttttgaaacaagagtgcgcagagttggaagccatttgccctaggatattgccaaagtcaagtcaagtgaggcaggatgccaaaaaagatttggacaaagtatggtaatatagctgacaatatgaaaatgtccagacctttgtagcctctatatcagagtagcatctttcacattctcctttatcatcttccagctttatggatattgattctatctacacagttaaaataggtattgtcactgtcaaagtaatcagtgtagtagtagatttaggacgggactaggcattgggcgcccagtaaaacacaaaaaatcaggtgctatccccatctggcagctgctgcatgttgcctccctctcacactttctgcgtgctgcagctgcatatgcaagcctctaagtcattttttgcaatgtacccgctctacatttctctctttgtacagtaggccaacctcttttgcatgcacgcatgaagctctatttgcaagcttcaaatgtttttctttcttttaaattacttaacaaatctacgatccgattactgttgcaattaaatctaaaacaacatatcacatgattatattatgatgaaatgccattaagttctaatagaaacattttcatagcacatgtgaaacatcgagtatttcccgtagatttatgggtaacaaaaccagcaacatgagaaatatactgtgttgcaaaagcagcattcttaaatagtccaacgctccgatctcctttatctgctatactaccttattaacatatagtataatgacaaatatataagaaaagaaaaactgaatgaagtatcttctctgcactcatatggtggccgaaattttgacaaaatgacccttttagaaaacttatttgaagaataaaccttggtaaaaactaattgcaaaaatgaacctttgcctcagcaccaacgtcatcagcaaagctagcctagcatggtgggggaggacatcagctgtgtgccagcctaccaggtggtgttgagttcgatcctccattcctccaccacaatactcatattcttttaagaaatggcatgttttatttgcaaatttatttattttgatctaatattcttttcataaatgacatgtttaatttgtaaatttatttattttgaatttgaaaaaatatatgaaagaactataagttgttctattatctgagaaagaacacaaaaacataatgtgtatgtgtatatatctggcgatgtgcttactactgaccatcaccattggagttgattttggtcgaatccttggcagggtcaggataaaccggcgaggtcaacagatcaatgcctttcacgggagatagcaggctagcgagtaacaggaacatggtgaatgcgagcaacgagctcttgaggccattttacatgtggaaatactggctattggatgtggatgtacgcctctgtctatttgagcaaacattttgtaaacaaatatttcaaatcaagcaaaaagaagtatactaaaaagaaaattaggaaagtaagagaaaacaaaaaaaaggtgtggagggaggggataatcgaaatcgaaccctgcacactgtttatagctgacgacctccaccaacatgctaggctgcttggagctgagctctgatgagtcagcaaacctggggcaccttggacaagagctcagcgccgtcgaggctggcgcggagtcaaaggttcattttctcaattagtttttgccacgtttattttttaaattagttttctaaaagtcattttgtcaaaatttcagcatatagtgcaatattctgtctgtaaggaaaaatattcccacatgggaatcctgaaggagatcactatggggaattcaaaatttttaatactcttcaggaaatagtccctttaataataccaacatgaaacctcagactctagcttatttctgttttgtctagaagcaactctgcagcagtattaggagaaaataagggtctctcaactaactgctatgaaggcaccacccagtcctattctgaaaatacaaaacctgctgggtggctaggtgctattcctgatgagacaaactgatgctgaacaacttatgcatattgcaacactggaagtaaagaaagtatgaaataaaaaagaggtacacttattaatccattgtacctcacgctgccggctttgatactccaacaaaacattttgattaagaaaaagcatagaatttgcttcggattcagtatcttgaattgcacaatccagttcttctatggtagtaggcatctgcaaacagaaacagtggaagcaggatcgtgggtgctaagtgccagcatatgctgataatacatgtggtttttttggccaaagtaaatggcaatgcatctcaaattattcacataataataaaaaggaaaactggaagtaatagagaaaacaacataagaaatccagttgtaaacagcagataattagagggacatcataaatcctaaacaaccaaacaagcagtgaggatcttttactgtggccttatggagcattccaacaactaaatgagctaaaatcagaagagttaattcttatgagaagaaactaacaccctagagcataggtgcttcagacagaattcagccattcgtggttgtttgaacatcaagttgttgctactgtagttgccagaatcatgatctgttggttcctggtacgtgtccctgcctgcgcaattcatcacttgacaaacctaggatttagcaagagggatgtacctctcctatttatgaatccaatctgaggttcataacccaaacaatgccacaaagtttcattgaatatcgaaccgtggccttatattaaaaagaaaaggtaaaggtaaaggagcttgtagttgactggctcagcccagcaacatcgttaagctcatcctgattgagttcctgcttgactttcacggtacgtgcaggtagatcgctggtaaaccccaaatcatgtgatctgattttgggtttgacaaactatgctgcaaatctggtaactaaggttttgtgataaatttatcattaaaaaaataattttataaaaggatctagtggttgcagattagggagattttacagttggtatgctaactcaactaaaatatgtgaatgctgattcacaaataagacaagaaaagtacaaaattaaattcaaacagtacctcaagaaacttttttgcaaggtcttcggtgatcatagctattgactctgcatgctgttttgcattagacaactgctgcttatgctcttgagtttttcttttacctgattagaggaacatatgtcatgtgatagtgccagcatgagacaaatggaatcaatcacgaaagtaatgtattgccaacttgccatatgctacactactctcaatcattacagaaatgaaatttcctacaaaggcctttataagcttgccaggcacattcaaccgcagttgaccatttatagtaccagtctcaaaacatagttgtctttattcaaaactcaaaagcccaagagagcatctgttcaactttgtcagtcaatacttaacagattcttagaacacctcagaaaataaaaatacacttttttatgtagagtagttgttaacttacgacatgttagaatacccatgacttgcctgggactaaagtctaacgttgtagaatattagatatatccattcaaaaatcagcaagaactcacatggttctgatatagctatacttcaaaaaaaaaatctactcaggagatgcatgatggattttgaatagtcttcacctctacaaaccaaacagacctgaggaatgagcatgacatgaaagtgagcataagatttgtcaacccaaaggcaaaaactcaaagaaaaaattgccttggaccctaagccactttccaaaatatttgccaaactgagtggttagaaacaacaaaagaatggattgaaacatcaactcacagttttcatattctttagcagcttcaatagcattcttttcaagtttcttcacatccttttccatctcccatatctatcagatgattaatgaaggacagatgattacatgtgcgaattgtttcggtacaaggaacgggataagacataagcaaatatggcaattttctggtgtaacatgtgcaaattatgtgtgctttagaccaaactagtattttagtaatttatatatcttattgcaagcagccaaacatttgtaaaacagctgtgattaattgggtgattaattgcaaagtttccaagcggagattaattgggtcactgcaaggtaatcaaaatgcaagaaatatgcacagttcaattcaagaagttttgtgttatgaaagtaactagtttctcacaaagcatacctttgtatcgagctcaatggaagccatgttcttttgtgtgcaactccatttgagagcaacagcttcaataagtaaatcctgagagaatttaaataaaatttatgcaagcacaaatgtgatgatgatcttcaagataaacaaaatattgtatcatcgtcagaagctccaagctctgttaagtgctaaccttgagttttagcactagttcatatcgctgatcatttaactttgccgcctgatcaacaaactttcttttgcttgactccatatcttcctctttatatatagtctccaacattcttcttttaatatctagagacaagcaccaaatattagaaaagctacaagtagaagaacagcaatagatatcgtaccaacacgtctccgtgtttcttcttgcctcttcttctcaaacatcatcgtgtctgtaatctcttcctggaaatatggcaattaaaagatgagcactatgagaaacaactgggcattaactatatccaaatctaaaagtgaatagagcttaaatcgatgaaacctttttcctgcgaatttttgctgcttcatcttctaattgtctctgttccttcagaagcttctttaagtcttcatccatgccgtcaatatctttgatatgcttatccttctgagatcgaagtctttcagagtcaataacatctaaatctgcataaaaaatctgacaagcatcaggcaccaccagatcagaatgcacaacccaagtagctgacaggcattaatgttgagattgtaacacatactgcacataaaaagacgggaaggattgacggcatctacaaatgctgacaaatgaccgccatatcttgacctggaccaccgatagtggttatctggggtccaaaagtcagaaatgcctagctttggtacatcatctgctctattgtgtgtttcatctgtacctatatactatataggcataatagagggggaaacagaagaggaaacacgattgaggattctggtcagttcagcttggtatagattaatgaagtcgacataaacagttataccgaacggtccaaattagcctgactaattaaaacatctttcacagcaggaggagcttcaaaaacttgatcaagtcgtgagtagatcccaacttgttgcatctgcaaaagaaacagcacactcaatctaaattattgctcttaccattctttcatgtttttaagagggaacaaagactgagaaagctttaagattgatgaagtcaccagaagagaatgactctggtgcccctacattgagtgcttagacaaaacaagagaatatgtgcttaggccaaaaaaaagaagacgatttgtgtgggggtgttcatacacaacaagttagaaaataggatgagggaataatgtcaatgtagaacttctgtttttttttgtaactgtttttctccttcttaatgaaatgaaatgatgtgcaattaatgtgaatgtagaacttacaacttgcaattaatgtgaaacttaggccaaaaaaggagtaagaaaaatatctatgttcccaaatgccaaatgcttttttttagattaaatgcttggacaatgcctgctgacctccagagtgatgttgaatggttctctccttatgcctttgtcccccatgaagttcagaacaggaatatcatattgcttcatttgtctaaccaaaaggtcacgatcggaagcatcctgagtaatgaatgactgccacataaaagcaaaatggcagttaattacagatgcagtatcttccataggaggaaagaataagatggcatggtagtgttttatggtttccaagtcaatgatgacaataaataagggaccttgtctagaaatggtttaatgagatgccatcctactggacactaaccatgtccagcaactggaggataaatttgcaacagcacattgactatgtgaaggaaaaacaaaacacaatgtgcagtgcacaacagaaccagcagccactggtaagtgtgttcctcttggctttccattgtttcatggaaatgctaaaataaagtaaaacataagcatcacactaattagcagagaggaacataaggtgctatcgtagtatctataccttccatatatagcttgcgacatggccttccaagtacgaagcgtgaaccttatcctggacatttacctgacagcagtacaaagaagatgtactattacttgtatgatcagcaaagcagacaatagttggtgaacatgcaagtaaacaaacctcaaggagaacaggtccataaacttcagccctgaacatgtgtcggttatcttgcacccagttgtatgcttcattgattttctcagcaccagaatatcgcaatgcttggagcagcttattgtttttattttccatttgcttcaacctgtgataaataataactagctagtaggtacccaagtcttggacaaagtagaaattaatagacaaaacgagtacctatcagagcagttcctcagattttctctctctcgaactaactgggactccatatctgtctttttcctttttagctcatttatatcgcaagtcagtcgtgcaatttcctccgtgagttgaatctgtgaagaaacataaaattattaacgggcttaaataattactagagcagataaaccgtacacaatacttgtatgctacatatgcaaaattgcaaacaaaaaaaaagatgtatgacagcaaaagctcgttatctaaaataaatgacagcaaaaactagggaaaataaggtgaataaaccaaccatttcagctttaggtgcttcatatggttgtagatcatcaagttccctctcagcagcagcaagggcttccttagccttcaagatcctttgctgacgggatctttcttgtcttttcagatcttctatgtcctccagtgtagctctcaattgtcctttctgatagagaagacgtgttaatgacttgcagcagtgaaatagtactagaaatatcatttaggtaaagaagagtttataccagttgtagttccttgtgtgtaatatcttggcgcctcttcatgttttccgccatatggctgtttatcctttttgtatttgaagtatgagacattttctttttcttgagctctctacaaatagggaaagtaacaagaggggggtattctattagaacttaaagcttcaaactttgatatttaagccagtcacataaaggtaaagtgtgaagagaaacttttccttagaactgggaaaagaatgtcaaaaagctggcagtacactatatccaatggtaattcaaaaaaatgtatcctgacctctccctgcctccctccctccctctttttagttatctgttgctctcttgagtaatcagagagcattcctatcccagtataggttgatactaattcttccttcttcttttttcccttttacatttaaggtgacaatgtgataatgtacaatgattaaatagaggggattcgatttgtgttgaatccaaacaatatgattacacaagttacttgaatatgaaaaaagttaaggggagatgaggaacataaagttaaacttatactagcatgtggttgcaagcatgaccaaggaatcctgtcattttatatgaagtgatcggattcacaaaatgcttacatattaaccgtgatagtgataacatattctgtataaatcaagttctagcttgttttaattagtgttactcaagtacaaaaaggaaattgatatgaaaaattaaagggaagtgtgtgtcaatcaaaacatagaagtactactgaatcaaggttggaagttaatagaactgtcctcttggctgtacgtgaatgtatccattcagattgaagggctttgaaaggaaatcttcataacgaagaacatcagaacaaatgcctagcccacgtagttcaaagatacctctagagatgagtttataaatgaatgaaaaattgaagccagttgagcatgaaacatactcgacagggcctttagaatcttcccagatttttgccacttcctccatttttttcttctcagttttctccttctcctgtgcttctttgtattctttcttcttcatgtcatattttagccatgggagcttcttcttcattaattcagcctaagacaaaaccaacaagatgttataattatcactaaaatactttttatgcccttcatgtcataacccaaaagggggaatttaccaaaccaaaaaaatgaaactgcaaacctttttcagaagtctgtctctctgccggacacgttcaacatctttttctagttcagcattgagggcctttagattattcaaagtctgctccttttgctttacagcctaacaaacgagataaatttatcgtgaatcgataccatagggttgacatctaaacaagatatgcaaggaaatgggaatagctttcactggtccaagcaagcataaggaaagagtgaatagtgaatgattcagctttaccacttgaagaatcttcaattccttactcctgtctataagctgacggtgctggataggtagattaggatctccaacagccttttcagtctcttccagtaattggataggtgtcaacttcgcaaattcacatactcggtcttgaggaagaaactgaacagagttgagcacaaaagcaacagaaatcaggaatagattcacgataaaagggtaagtgagtggctcctctggattacaatatcatggcatgcaaaggaaaatgataaggaatggatcatgtaaaagagctgaatctaaaatggactggaggtgcacctgggtcaagttgttgacttgaatattgaatttcttgatgagatcaatgacttcctttttggggacagtggtgcctgcaggaaacaaatgttagtgatgcaggaatcatcgcctcaaatccaatccatttgctgaataaaaaggatagtgaaagaaataagcatcggtttgtgtaatgaggagtaaggagagcatgtaccatcgagctgccactcagacttgttgttggtatcgaccttcctagtgatgcagagcttgtggtcgggtgtattgccgcggagggaaatcttgacatggccggagtcctctcccctcttgacgaaggcagcgacgctggatgccctcccgagaatctgcagtgcattggtatgtagtattagagtagcatggaatcaatcgtacaggagaggagaggagaggagaggagaagagagagtacggcggggtcggcggcgagggcgagggcgatggcgcagacgagggagctcttgccggagccgttggggccgacgacgaggttgaggcggggaccggggcggcaggtgaggtggtcgtaggtcatgaagttgcagagctcgatctccacgatgttgcccggcacgtagtcgtcgtccccacgctgcgggggcgggggcggcggcggcggcgcggaggaggaggaagagggatccaccttggggcgcttggcggcgcgggagctcgccatgctcgctctctactccagtactcctcctccagtaggttggttggggttagggatttcaatcaaggttcttcttcttctactgctactgctaaacc
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| CDS seq | atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtttgtttacttgcatgttcaccaactattgtctgctttgctgatcatacaagtaatagtacatcttctttgtactgctgtcagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtggtccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttcccgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaaggaagagattacagacacgatgatgtttgagaagaagaggcaagaagaaacacggagacgtgttgatattaaaagaagaatgttggagactatatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag
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| Protein seq | MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVCLLACSPTIVCFADHTSNSTSSLYCCQSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL |
||||||||||
| Function | Structural maintenance of chromosomes protein 5 [UniProtKB/Swiss-Prot:Q9LFS8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0029240 | OsNaBo_05g0029240.04 | Chr05 | 30714096 | 30715865 | - | NAM | ||
| CDS seq | atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggtttgcagtttcatttttttggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgagtatgtttcatgctcaactggcttcaatttttcattcatttataaactcatctctagaggtatctttgaactacgtgggctaggcatttgttctgatgttcttcgttatgaagatttcctttcaaagcccttcaatctgaatggatacattcacgtacagccaagaggacagttctattaa
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| Protein seq | MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKVCSFIFLAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEYVSCSTGFNFSFIYKLISRGIFELRGLGICSDVLRYEDFLSKPFNLNGYIHVQPRGQFY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0029240 | OsNaBo_05g0029240.01 | Chr05 | 30704211 | 30715865 | - | NAM | ||
| CDS seq | atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtttgtttacttgcatgttcaccaactattgtctgctttgctgatcatacaagtaatagtacatcttctttgtactgctgtcagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtggtccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttcccgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaaggaagagattacagacacgatgatgtttgagaagaagaggcaagaagaaacacggagacgtgttgatattaaaagaagaatgttggagactatatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag
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| Protein seq | MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVCLLACSPTIVCFADHTSNSTSSLYCCQSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0029240 | OsNaBo_05g0029240.03 | Chr05 | 30704211 | 30715865 | - | NAM | ||
| CDS seq | atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtggtccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttcccgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaaggaagagattacagacacgatgatgtttgagaagaagaggcaagaagaaacacggagacgtgttgatattaaaagaagaatgttggagactatatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag
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| Protein seq | MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVNVQDKVHASYLEGHVASYIWKSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0029240 | OsNaBo_05g0029240.02 | Chr05 | 30704211 | 30715865 | - | NAM | ||
| CDS seq | atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagattttttatgcagatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaaggaagagattacagacacgatgatgtttgagaagaagaggcaagaagaaacacggagacgtgttgatattaaaagaagaatgttggagactatatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag
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| Protein seq | MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVNVQDKVHASYLEGHVASYIWKSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEIFYADLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0029240 | OsNaBo_05g0029240.05 | Chr05 | 30703251 | 30715889 | - | IsoSeq | ||
| CDS seq | atgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaaca |
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| Protein seq | MSRFPSAAIHPTTSSASLGRSIPTTSLSGSSMAPLSPKRKSLISSRNSIFKST |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr05 | 30704365 | 30704474 | - | OsNaBo_05g0029240.01,OsNaBo_05g0029240.02,OsNaBo_05g0029240.03 | OsNaBo_05g0029240.02,OsNaBo_05g0029240.01,OsNaBo_05g0029240.03,OsNaBo_05g0029240.05 | All |
| A5 | Chr05 | 30714422 | 30714534 | - | OsNaBo_05g0029240.04 | OsNaBo_05g0029240.01,OsNaBo_05g0029240.04,OsNaBo_05g0029240.02,OsNaBo_05g0029240.03,OsNaBo_05g0029240.05 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.269507 | 20.918184 | 8.951128 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0596600 | RBH | 4.999232 | 3.368879 | 6.291904 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g51790 | RBH | 2.343591 | 2.194821 | 1.574827 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0596600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0029430 | RBH | 1.560409 | 9.160035 | 10.166829 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0029230 | RBH | 0.475978 | 3.428024 | 6.229847 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0029230 | RBH | 1.671796 | 4.176631 | 19.684744 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0029280 | RBH | 0.755187 | 0.459540 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0029170 | RBH | 13.628412 | 11.260146 | 27.709990 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0466600 | RBH | 7.6261775 | 21.7284165 | 19.2270355 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0028860 | RBH | 0.877566 | 0.297775 | 2.239092 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0480000 | RBH | 6.646905 | 27.125063 | 32.358133 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0029040 | RBH | 0.302684 | 0.096848 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0028910 | RBH | 0.092020 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0029180 | RBH | 12.617902 | 12.295302 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0029160 | RBH | 1.297257 | 0.984525 | 2.452708 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0029210 | RBH | 0.480426 | 4.338903 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G028730 | RBH | 1.195856 | 2.830851 | 5.839768 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
