Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_05g0029180 OGI:05080680 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr05:30562391-30574067
Gene Symbol SMC5
DNA seq

ctatagccagattaagaaacatgggagttggtagatgctatctgaaaatgcctcctgaaatgctaagagtactgtcacaaactgtggagtgtttggctgactggctgctctcacaagctgctggaacatcttcctctcgtttatgggatccattcctgcaatttcggggaaacagttacctttgtaatgcttcaacaaactagtaatcattttataacagcattgagtgcataGggaacaaaaacttgtgagggttggcttgccttgatttatctcatcaacgacccgaaaggggcagttggtaagatcttgaagtgatacaaggtacaggatggttgaaactgatcgctcctatAaaggagcaaaaaataaTAGtaagtataaggcatatttttctagaatgcatctaatagtttttttcatacccctccagattggtgatgagcgctcaacacctgcaactgacctgtttgcctgaggaaaataatgccacaatttgattaaaaaccacaaaataaggccaacagaaaccttgtggaaacccttaaactacaggctacagtagaagcaggctgaactatggaattaaacactgcgggatgaacatggctagaaacaggcaacaaaagacgggttacaggaccatccaaatagcacctttaatgataaaataatcggtaacgccattctaatcttgagtagatgttaaatgctccctcggttccatattgtaatatgttttaagtttgtcaaagtttgaccaagttcatagaaaaatgtatctacgtttctgacacaaaacaaatatattacaaaagtatattcggtggtggatttaatgaaaccaatttgctgttgtagatgttgctacgttttttttataaacttagtcaaagtttgacataggatgaaacctaaaacatcttacaatatggaacaaagggagtagaacataatagtcacagataaatagcaaataaaagatctcatgattgaagtatggagttacaaataagaacacctggctaatgactaagatctctcccatgttAGAagacaacagagctattctcgtgaaagtaatagttcaagtgctactggcatgaggtatcactagaagtctaagaaagatagaatccacagaaaacAAaagatctgagagcacatcggaattcaatacaaatgaacagagtgttttatacttcaccttttatccttcttaacatatacatttgatgatcacttatcatcatataatgtatgagtgcaacctagaaataatcaagttaccctatactataactcagtgatttgtaagactgttctctgcttactggtcatatctgtttaaccacggatagcagtccctagtttggttgccatcaggaaatagtaccactactccatcagtgatggacaagtagtgtacttatcattatttacttaattgcaagaaatcagagcagtgctctcaattaggaaaagaaactcacctaaacttgacctttataaggatgccatattgctcaaaatcaagaccatgttcatctgcaggaaatttggtacagattggtatgccatctgaaaatagtacaaataacagtgtgataacacaaaaaaggaactgccacacataccaagtgaaacttctccagcaacagccatttcttgaaagttacgactaaacgtgctgtttatttttgaaacaagagtgcgcagagttggaagccatttgccctaggatattgccaaagtcaagtcaagtgaggcaggatgccaaaaaagatttggacaaagtatggtaatatagctgacaatatgaaaatgtccagacctttgtagcctctatatcagagtagcatctttcacattctcctttatcatcttccagctttatggatattgattctatctacacagttaaaataggtattgtcactgtcaaagtaatcagtgtagtagtagatttaggacgggactaggcattgggcgcccagtaaaacacAaaaaatcaggtgctatccccatctggcagctgctgcatgttgcctccctctcacactttctgcgtgctgcagctgcatatgcaagcctctaagtcattttttgcaatgtacccgctctacatttctctctttgtacagtaggccaacctcttttgcatgcacgcatgaagctctatttgcaagcttcaaatgtttttctttcttttaaattacttaacaaatctacgatccgattactgttgcaattaaatctaaaacaacatatcacatgattatattatgatgaaatgccattaagttctaatagaaacattttcatagcacatgtgaaacatcgagtatttcccgtagatttatgggtaacaaaaccagcaacatgagaaatatactgtgttgcaaaagcagcattcttaaatagtccaacgctccgatctcctttatctgctatactaccttattaacatatagtataatgacaaatatataagaaaagaaaaactgaatgaagtatcttctctgcactcatatggtggccgaaattttgacaaaatgacccttttagAaaacttatttgaagaataaaccttggtaaaaactaattgcaaaaatgaacctttgcctcagcaccaacgtcatcagcaaagctagcctagcatggtgggggaggacatcagctgtgtgccagcctaccaggtggtgttgagttcgatcctccattcctccaccacaatactcatattcttttaagaaatggcatgttttatttgcaaatttatttattttgatctaatattcttttcataaatgacatgtttaatttgtaaatttatttattttgaatttgaaaaaatatatgaaagaactataagttgttctattatctgagaaagaacacaaaaacataatgtgtatgtgtatatatctggcgatgtgcttactactgaccatcaccattggagttgattttggtcgaatccttggcagggtcaggataaaccggcgaggtcaacagatcaatgcctttcacgggagatagcaggctagcgagtaacaggaacatggtgaatgcgagcaacgagctcttgaggccattttacatgtggaaatactggctattggatgtggatgtacgcctctgtctatttgagcaaacattttgtaaacaaatatttcaaatcaagcaaaaagaagtatactaaaaagaaaattaggaaagtaagagAaaacaaaaaaaaggtgtggagggaggggataatcgaaatcgaaccctgcacactgtttatagctgacgacctccaccaacatgctaggctgcttggagctgagctctgatgagtcagcaaacctggggcaccttggacaagagctcagcgccgtcgaggctggcgcggagtcaaaggttcaTtttctcaattagtttttgccacgtttattttttaaattagttttctaaaagtcattttgtcaaaatttcagcatatagtgcaatattctgtctgtaaggaaaaatattcccacatgggaatcctgaaggagatcactatGgggaattcaaaatttttaatactcttcaggaaatagtccctttaataataccaacatgaaacctcagactctagcttatttctgttttgtctagaagcaactctgcagcagtattagGAgaaaataagggtctctcaactaactgctatgaaggcaccacccagtcctattctgAaaatacaaaacctgctgggtggctaggtgctattcctgatgagacaaactgatgctgaacaacttatgcatattgcaacactggaagtaaagaaagtatgaaataaaaaagaggtacacttattaatccattgtacctcacgctgccggctttgatactccaacaaaacattttgattaagaaaaagcatagaatttgcttcggattcagtatcttgaattgcacaatccagttcttctatggtagtaggcatctgcaaacagaaacagtggaagcaggatcgtgggtgctaagtgccagcatatgctgataatacatgtggtttttttggccaaagtaaatggcaatgcatctcaaATTattcacataataatAaaaaggaaaactggaagtaatagagaaaacaacataAGaaatccagttgtaaacagcagataattagagggacatcataaatcctaaacaaccaaacaagcagtgaggatcttttactgtggccttatggagcattccaacaactAaatgagctaaaatcagaagagttaattcttatgagaagaaactaacaccctagagcataggtgcttcagacagaattcagccattcgtggttgtttgaacatcaagttgttgctactgtagttgccagaatcatgatctgttggttcctggtacgtgtccctgcctgcgcaattcatcacttgacaaacctaggatttagcaagagggatgtacctctcctatttatgaatccaatctgaggttcataacccaaacaatgccacaaagtttcattgaatatcgaaccgtggccttatattaaaaagaaaaggtaaaggtaaaggagcttgtagttgactggctcagcccagcaacatcgttaagctcatcctgattgagttcctgcttgactttcacggtacgtgcaggtagatcgctggtaaaccccaaatcatgtgatctgattttgggtttgacaaactatgctgcaaatctggtaactaaggttttgtgataaatttatcattAaaaaaataattttataaaaggatctagtggttgcagattagggagattttacagttggtatgctaactcaactaaaatatgtgaatgctgattcacaaataagacaagaaaagtacaaaattaaattcaaacagtacctcaagaaacttttttgcaaggtcttcggtgatcatagctattgactctgcatgctgttttgcattagacaactgctgcttatgctcttgagtttttcttttacctgattagaggaacatatgtcatgtgatagtgccagcatgagacaaatggaatcaatcacgaaagtaatgtattgccaacttgccatatgctacactactctcAatcattacAgaaatgaaatttcctacaaaggcctttataagcttgccaggcacattcaaccgcagttgaccatttatagtaccagtctcaaaacatagttgtcTttattcaaaactcaaaagcccaagagagcatctgttcaactttgtcagtcaatacTtaacagattcttagaacacctcagaaaataaaaatacacTtttttatgtagagtagttgttAacttacgacatgttagaatacccatgacttgcctgggactaaagtctaacgttgtagaatattagatatatccattcaaaaatcagcaagaactcacatggttctgatatagctatacttcaaaaaaaaaatctactcaggagatgcatgatggaTtttgaatagtcttcacctctacaaaccaaacagacctgaggaatgagcatgacatgaaagtgagcataagatttgtcaacccaaaggcaaaaactcaaagaaaaaattgccttggaccctaagccactttccaaaatatttgccaaactgagtggttagaaacaacaaaaGaatggattgaaacatcaactcacagttttcatattctttagcagcttcaatagcattcttttcaagtttcttcacatccttttccatctcccatatctatcagatgattaatgaaggacagatgattacatgtgcgaattgtttcggtacaaggaacgggataagacataagcaaatatggcaattttctggtgtaacatgtgcaaattatgtgtgctttagaccaaactagtattttagtaatttatatatcttattgcaagcagccaaacatttgtaaaacagctgtgattaattgggtgattaattgcaaagtttccaagcggagattaattgggtcactgcaaggtaatcaaaatgcaagaaatatgcacagttcaattcaagaagttttgtgttatgaaagtaactagtttctcacaaagcatacctttgtatcgagctcaatggaagccatgttcttttgtgtgcaactccatttgagagcaacagcttcaataagtaaatcctgagagaatttaaataaaatttatgcaagcacaaatgtgatgatgatcttcaagataaacaaaatattgtatcatcgtcagaagctccaagctctgttaagtgctaaccttgagttttagcactagttcatatcgctgatcatttaactttgccgcctgatcaacaaactttcttttgcttgactccatatcttcctctttatataGTCTCCAACATTCTTCTTTTAATATCTAGAGACAAGCACCAAATATTAGAAAAGCTACAAGTAGAAGAACAGCAATAGATATCGTACCAACACGTCTCCGTGTTTCTTCTTGCCTCTTCTTCTCAAACATCATCGTGTCTGTAATCTCTTCCTGGAAATATGGCAATTAAaaagatgagcactatgagaaacaactgggcattaactatatccaaatctaaaagtgaatagagcttaaatcgatgaaacctttttcctgcgaatttttgctgcttcatcttctaattgtctctgttccttcagaagcttctttaagtcttcatccatgccgtcaatatctttgatatgcttatccttctgagatcgaagtctttcagagtcaataacatctaaatctgcataaaaaatctgacaagcatcaggcaccaccagatcagaatgcacaacccaagtagctgacaggcattaatgttgagattgtaacacatactgcacataaaaagacGggaaggattgacggcatctacaaatgctgacaaatgaccgccatatcttgacctggACCaccgatagtggttatctggggtccaaaagtcagaaatgcctagctttggtacatcatctgctctattgtgtgtttcatctgtacctatatactatataggcataatagagggggaaacagaagaggaaacacgattgaggattctggtcagttcagcttggtatagattaatgaagtcgacataaacagttataccgaacggtccaaattagcctgactaattaaaacatctttcacagcaggaggagcttcaaaaacttgatcaagtcgtgagtagatcccaacttgttgcatctgcaaaagaaacagcacactcaatctAaattattgctcttaccattCtttcatgtttttaagagggaacaaagactgagaaagctttaagattgatgaagtcaccagaagagaatgactctggtgcccctacattgagtgcttagacaaaacaagagaatatgtgcttaggccaaaaaaaagaagacgatttgtgtGggggtgttcatacacaacaagttagaaaataggatgagggaataatgtcaatgtagaacttctgTttttttttgtaactgtttttctccttcttaatgaaatgaaatgatgtgcaattaatgtgaatgtagaacttacaacttgcaattaatgtgaaacttaggccaaaaaaggagtaagaaaaatatctatgttcccaaatgccaaatgcttttttttagattaaatgcttggacaatgcctgctgacctccagagtgatgttgaatggttctctccttatgcctttgtcccccatgaagttcagaacaggaatatcatattgcttcatttgtctaaccaaaaggtcacgatcggaagcatcctgagtaatgaatgactgccacataaaagcaaaatggcagttaattacagatgcagtatcttccataggaggaaagaataagatggcatggtagtgttttatggtttccaagtcaatgatgacaataaataagggaccttgtctagaaatggtttaatgagatgccatcctactggacactaaccatgtccagcaactggaggataaatttgcaacagcacattgactatgtgaaggaaaaacaaaacacaatgtgcagtgcacaacagaaccagcagccactggtaagtgtgttcctcttggctttccattgtttcatggaaatgctaaaataaagtaaaacataagcatcacactaattagcagagaggaacataaggtgctatcgtagtatctataccttccatatatagcttgcgacatggccttccaagtacgaagcgtgaaccttatcctggacatttacctgacagcagtacaaagaagatgtactattacttgtatgatcagcaaagcagacaatagttggtgaacatgcaagtaaacaaacctcaaggagaacaggtccataaacttcagccctgaacatgtgtcggttatcttgcacccagttgtatgcttcattgattttctcagcaccagaatatcgcaatgcttggagcagcttattgtttttattttccatttgcttcaacctgtgataaatAataactagctagtaggtacccaagtcttggacaaagtagaaattaatagacaaaacgagtacctatcagagcagttcctcagattttctctctctcgaactaactgggactccatatctgtctttttcctttttagctcatttatatcgcaagtcagtcgtgcaatttcctccgtgagttgaatctgtgaagaaacataaaattattaacgggcttaaataattactagagcagataaaccgtacacaatacttgtatgctacatatgcaaaattgcaaacaaaaaaaaagatgtatgacagcaaaagctcgttatctaaaataaatgacagcaaaaactagggaaaataaggtgaataaaccaaccatttcagctttaggtgcttcatatggttgtagatcatcaagttccctctcagcagcagcaagggcttccttagccttcaagatcctttgctgacgggatctttcttgtcttttcagatcttctatgtcctccagtgtagctctcaattgtcctttctgatagagaagacgtgttaatgacttgcagcagtgaaatagtactagaaatatcatttaggtaaagaagagtttataccagttgtagttccttgtgtgtaatatcttggcgcctcttcatgttttccgccatatggctgtttatcctttttgtatttgaagtatgagacattttctttttcttgagctctctacaaatagggaaagtaacaagaggggggtattctattagaacttaaagcttcaaactttgatatttaagccagtcacataaaggtaaagtgtgaagagaaacttttccttagaactgggaaaagaatgtcaaaaagctggcagtacactatatccaatggtaattcaaaaaaatgtatcctgacctctccctgcctccctccctccctctttttagttatctgttgctctcttgagtaatcagagagcattcctatcccagtataggttgatactaattcttccttcttcttttttcccttttacatttaaggtgacaatgtgataatgtacaatgattaaatagaggggattcgatttgtgttgaatccaaacaatatgattacacaagttacttgaatatgaaaaaagttaaggggagatgaggaacataaagttaaacttatactagcatgtggttgcaagcatgaccaaggaatcctgtcattttatatgaagtgatcggattcacaaaatgcttacatattaaccgtgatagtgataacatattctgtataaatcaagttctagcttgttttaattagtgttactcaagtacaaaaaggaaattgatatgaaaaattaaagggaagtgtgtgtcaatcaaaacatagaagtactactgaatcaaggttggaagttaatagaactgtcctcttggctgtacgtgaatgtatccattcagattgaagggctttgaaaggaaatcttcataacgaagaacatcagaacaaatgCctagcccacgtagttcaaagatacctctagagatgagtttataaatgaatgaaaaattgaagccagttgagcatgaaacatactcgacagggcctttagaatcttcccagatttttgccacttcctccatttttttcttctcagttttctccttctcctgtgcttctttgtattctttcttcttcatgtcatattttagccatgggagcttcttcttcattaattcagcctaagacaaaaccaacaagatgttataattatcactaaaatacTttttatgcccttcatgtcataacccaaaagggggaatttaccaaaccaaaaaaatgaaactgcaaacctttttcagaagtctgtctctctgccggacacgttcaacatctttttctagttcagcattgagggcctttagattattcaaagtctgctccttttgctttacagcctaacaaacgagataaatttatcgtgaatcgataccatagggttgacatctaaacaagatatgcaaggaaatgggaatagctttcactggtccaagcaagcataaggaaagagtgaatagtgaatgattcagctttaccacttgaagaatcttcaattccttactcctgtctataagctgacggtgctggataggtagattaggatctccaacagccttttcagtctcttccagtaattggataggtgtcaacttcgcaaattcacatactcggtcttgaggaagaaactgaacagagttgagcacaaaagcaacagaaatcaggaatagattcacgataaaagggtaagtgagtggctcctctggattacaatatcatggcatgcaaaggaaaatgataaggaatggatcatgtaaaagagctgaatctaaaatggactggaggtgcacctgggtcaagttgttgacttgaatattgaatttcttgatgagatcaatgacttcctttttggggacagtggtgcctgcaggaaacaaatgttagtgatgcaggaatcatcgcctcaaatccaatccatttgctgaataaaaaggatagtgaaagaaataagcatcggtttgtgtaatgaggagtaaggagagcatgtaccatcgagctgccactcagacttgttgttggtatcgaccttcctagtgatgcagagcttgtggtcgggtgtattgccgcggagggaaatcttgacatggccggagtcctctcccctcttgacgaaggcagcgacgctggatgccctcccgagaatctgcagtgcattggtatgtagtattagagtagcatggaatcaatcgtacaggagaggagaggagaggagaggagaagagagagtacggcggggtcggcggcgagggcgagggcgatggcgcagacgagggagctcttgccggagccgttggggccgacgacgaggttgaggcggggaccggggcggcaggtgaggtggtcgtaggtcatgaagttgcagagctcgatctccacgatgttgcccggcacgtagtcgtcgtccccacgctgcgggggcgggggcggcggcggcggcgcggaggaggaggaagagggatccaccttggggcgcttggcggcgcgggagctcgccatgctcgctctctactccagtactcctcctccagtaggttggttggggttagggatttcaatcaaggttcttcttcttctactgctactgctaaac

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CDS seq

atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtttgtttacttgcatgttcaccaactattgtctgctttgctgatcatacaagtaatagtacatcttctttgtactgctgtcagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtGGTccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttccCgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaagGAAGAGATTACAGACACGATGATGTTTGAGAAGAAGAGGCAAGAAGAAACACGGAGACGTATATTAAAAGAAGAATGTTGGAGACtatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag

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Protein seq

MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVCLLACSPTIVCFADHTSNSTSSLYCCQSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRILKEECWRLYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL

Function Structural maintenance of chromosomes protein 5 [UniProtKB/Swiss-Prot:Q9LFS8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_05g0029180 OsGoSa_05g0029180.01 Chr05 30568743 30574067 - NAM
CDS seq

atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtGGTccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttccCgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaagGAAGAGATTACAGACACGATGATGTTTGAGAAGAAGAGGCAAGAAGAAACACGGAGACGTGTTGATATTAAAAGAAGAATGTTGGAGACtatataa

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Protein seq

MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVNVQDKVHASYLEGHVASYIWKSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETI

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Gene Transcript Chromosome Start End Strand Source
OsGoSa_05g0029180 OsGoSa_05g0029180.03 Chr05 30562391 30574015 - NAM
CDS seq

atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtttgtttacttgcatgttcaccaactattgtctgctttgctgatcatacaagtaatagtacatcttctttgtactgctgtcagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtGGTccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttccCgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaagGAAGAGATTACAGACACGATGATGTTTGAGAAGAAGAGGCAAGAAGAAACACGGAGACGTATATTAAAAGAAGAATGTTGGAGACtatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag

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Protein seq

MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVCLLACSPTIVCFADHTSNSTSSLYCCQSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRILKEECWRLYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL

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Gene Transcript Chromosome Start End Strand Source
OsGoSa_05g0029180 OsGoSa_05g0029180.02 Chr05 30562391 30574015 - NAM
CDS seq

atggcgagctcccgcgccgccaagcgccccaaggtggatccctcttcctcctcctccgcgccgccgccgccgcccccgcccccgcagcgtggggacgacgactacgtgccgggcaacatcgtggagatcgagctctgcaacttcatgacctacgaccacctcacctgccgccccggtccccgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatcgccctcgccctcgccgccgaccccgccattctcgggagggcatccagcgtcgctgccttcgtcaagaggggagaggactccggccatgtcaagatttccctccgcggcaatacacccgaccacaagctctgcatcactaggaaggtcgataccaacaacaagtctgagtggcagctcgatggcaccactgtccccaaaaaggaagtcattgatctcatcaagaaattcaatattcaagtcaacaacttgacccagtttcttcctcaagaccgagtatgtgaatttgcgaagttgacacctatccaattactggaagagactgaaaaggctgttggagatcctaatctacctatccagcaccgtcagcttatagacaggagtaaggaattgaagattcttcaagtggctgtaaagcaaaaggagcagactttgaataatctaaaggccctcaatgctgaactagaaaaagatgttgaacgtgtccggcagagagacagacttctgaaaaaggctgaattaatgaagaagaagctcccatggctaaaatatgacatgaagaagaaagaatacaaagaagcacaggagaaggagaaaactgagaagaaaaaaatggaggaagtggcaaaaatctgggaagattctaaaggccctgtcgaagagctcaagaaaaagaaaatgtctcatacttcaaatacaaaaaggataaacagccatatggcggaaaacatgaagaggcgccaagatattacacacaaggaactacaactgaaaggacaattgagagctacactggaggacatagaagatctgaaaagacaagaaagatcccgtcagcaaaggatcttgaaggctaaggaagcccttgctgctgctgagagggaacttgatgatctacaaccatatgaagcacctaaagctgaaatgattcaactcacggaggaaattgcacgactgacttgcgatataaatgagctaaaaaggaaaaagacagatatggagtcccagttagttcgagagagagaaaatctgaggaactgctctgataggttgaagcaaatggaaaataaaaacaataagctgctccaagcattgcgatattctggtgctgagaaaatcaatgaagcatacaactgggtgcaagataaccgacacatgttcagggctgaagtttatggacctgttctccttgaggtaaatgtccaggataaggttcacgcttcgtacttggaaggccatgtcgcaagctatatatggaagtcattcattactcaggatgcttccgatcgtgaccttttggttagacaaatgaagcaatatgatattcctgttctgaacttcatgggggacaaaggcataaggagagaaccattcaacatcactctggagatgcaacaagttgggatctactcacgacttgatcaagtttttgaagctcctcctgctgtgaaagatgttttaattagtcaggctaatttggaccgttcgtatataggtacagatgaaacacacaatagagcagatgatgtaccaaagctaggcatttctgacttttggaccccagataaccactatcggtGGTccaggtcaagatatggcggtcatttgtcagcatttgtagatgccgtcaatccttccCgtctttttatgtgcaatttagatgttattgactctgaaagacttcgatctcagaaggataagcatatcaaagatattgacggcatggatgaagacttaaagaagcttctgaaggaacagagacaattagaagatgaagcagcaaaaattcgcaggaaaaagGAAGAGATTACAGACACGATGATGTTTGAGAAGAAGAGGCAAGAAGAAACACGGAGACGTATATTAAAAGAAGAATGTTGGAGACtatataaagaggaagatatggagtcaagcaaaagaaagtttgttgatcaggcggcaaagttaaatgatcagcgatatgaactagtgctaaaactcaaggatttacttattgaagctgttgctctcaaatggagttgcacacaaaagaacatggcttccattgagctcgatacaaagatatgggagatggaaaaggatgtgaagaaacttgaaaagaatgctattgaagctgctaaagaatatgaaaactgtaaaagaaaaactcaagagcataagcagcagttgtctaatgcaaaacagcatgcagagtcaatagctatgatcaccgaagaccttgcaaaaaagtttcttgagatgcctactaccatagaagaactggattgtgcaattcaagatactgaatccgaagcaaattctatgctttttcttaatcaaaatgttttgttggagtatcaaagccggcagcgtgagatagaatcaatatccataaagctggaagatgataaaggagaatgtgaaagatgctactctgatatagaggctacaaagggcaaatggcttccaactctgcgcactcttgtttcaaaaataaacagcacgtttagtcgtaactttcaagaaatggctgttgctggagaagtttcacttgatgaacatggtcttgattttgagcaatatggcatccttataaaggtcaagtttaggcaaacaggtcagttgcaggtgttgagcgctcatcaccaatctggaggggagcgatcagtttcaaccatcctgtaccttgtatcacttcaagatcttaccaactgcccctttcgggtcgttgatgagataaatcaaggcaagccaaccctcacaagaatggatcccataaacgagaggaagatgttccagcagcttgtgagagcagccagtcagccaaacactccacagtttgtgacagtactcttagcatttcaggaggcattttcagatagcatctaccaactcccatgtttcttaatctggctatag

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Protein seq

MASSRAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYVPGNIVEIELCNFMTYDHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSVAAFVKRGEDSGHVKISLRGNTPDHKLCITRKVDTNNKSEWQLDGTTVPKKEVIDLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPIQHRQLIDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKRINSHMAENMKRRQDITHKELQLKGQLRATLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPKAEMIQLTEEIARLTCDINELKRKKTDMESQLVRERENLRNCSDRLKQMENKNNKLLQALRYSGAEKINEAYNWVQDNRHMFRAEVYGPVLLEVNVQDKVHASYLEGHVASYIWKSFITQDASDRDLLVRQMKQYDIPVLNFMGDKGIRREPFNITLEMQQVGIYSRLDQVFEAPPAVKDVLISQANLDRSYIGTDETHNRADDVPKLGISDFWTPDNHYRWSRSRYGGHLSAFVDAVNPSRLFMCNLDVIDSERLRSQKDKHIKDIDGMDEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRILKEECWRLYKEEDMESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGKPTLTRMDPINERKMFQQLVRAASQPNTPQFVTVLLAFQEAFSDSIYQLPCFLIWL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr05 30568779 30568846 - OsGoSa_05g0029180.01 OsGoSa_05g0029180.01,OsGoSa_05g0029180.03,OsGoSa_05g0029180.02 All

Expression

Leaf Root Panicle
FPKM 12.617902 12.295302 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0596600 RBH 4.999232 3.368879 6.291904
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g51790 RBH 2.343591 2.194821 1.574827
Nipponbare | IRGSP 1.0 | RAP-db Os05g0596600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0029430 RBH 1.560409 9.160035 10.166829
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0029230 RBH 0.475978 3.428024 6.229847
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0029230 RBH 1.671796 4.176631 19.684744
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0029280 RBH 0.755187 0.459540 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0029170 RBH 13.628412 11.260146 27.709990
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0466600 RBH 7.6261775 21.7284165 19.2270355
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0028860 RBH 0.877566 0.297775 2.239092
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0480000 RBH 6.646905 27.125063 32.358133
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0029040 RBH 0.302684 0.096848 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0028910 RBH 0.092020 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0029160 RBH 1.297257 0.984525 2.452708
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0029210 RBH 0.480426 4.338903 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G028730 RBH 1.195856 2.830851 5.839768
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0029240 RBH 5.269507 20.918184 8.951128
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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