Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_05g0008520 OGI:05022410 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr05:8316843-8323333
Gene Symbol -
DNA seq

atgccacccaGtccagggttctcctttggccagatttggcgaggagactggcgggtggtggatcggaagggtcctgggccagttctcagggatggaGgtttgttgaagtcagtcgatggcGgggcgtcggtgctgtgtggtggcagtcctgtcgttggcaggactggaAGCtggccggcggaGgggcgtcggtcaagtgtggcggaagccatatgccGccgatgtttagatggtggtttcggattgggcgacggaccacagcggtaGggggttccgagcgAaagcttagcccaatttctttgggccaacagtgacttcgccttcaggcgtggtaaccctcctgagggcactgttgaggtaCccatcctccctcggcaaggagctctgggtgaaaaccttgtccaattccttggatggatgacgacggcgtctttcggcgtcgcaaccctcgtgagggcgtcgttttagagtattcgtgtcgtggtggtgttgttggcccggtGgcgatcggtctcgcctagcgatGgccggttcggtgcttggcttccctctctgtagcgtgtgtttgggcggttggcatatGgttcGgggcgtgtgctctggtgcacatCcttcctcgacagccagctgttgatatAaaacttttcttgtaacatttttcttcctatcttaattacattgaatgacctccttcggtcattccggcaaaagtgatgatgatcgaTtaggattatggattcagatacaaatgtatgcacaatgcagagagacaacctttgtaccattaagaggcactgatacttttattataactaagcatactagaactttgctgattcttgcctttttctctacatttgatggtaaaaattgtgattaacatttgacaataaGtcaggaatatctatgttaggaagctacaataatcttttttgaattcatttttcttttacagatgataactttggctagataaGgaatgttacccagagtatgaagctgttccaGactgatttgcagaggagcgcggatgaaTtgaaaggcgcgggaaggaaagtgttcagctcGgcaccacaggtatccctctgtgcatggacggccactgcagtgaggatcactgtgatgtacacAaacaagacgacatgaactcgccttggcacagccatctatgttgatgtagagaaaggagcaactaccagctagaggtagaggatgttacaataagatcataggagcAatgaaCcctactgttgggatgaagtaatgggctcatgtggagttgttgcatgatgattgattctatatttctggactgatgcttccagtgggaggaagagaaaagctgggtagtttgcaatggtggttatggtggttggagccatcatggctatttttctaaaagAatgctaaaagcctaccttgcatcgtacttcttcagctgagatgGAaaatggctcAtggtaacaccaGCcAccaggtgtggaatggaagtgatcaaaagtggcttttctgcaatattgtagttggatttcgcttgcacaatcaatggcggcagtaaccagcaagaaagcaagctgtagcaatgtgacagtttacccttaggtattctatcatcgcatgattatagggatgaaaacgacatgatcaTtgatgcattaTtcttggaatctctctgcatattggttatattagaaggaagatggagAaaaacaagaaGggctggataatgctgCctctctgaattagccaggttccAGgcatgaaagagagaaggctcacaagtcacaacaaggaaatgaaagaggtcaagaacttgAacaagaaggatcaaccaaaaagatgtcagcactgatgtctgtactctggagacaGttgttcAAccaggaaaggaatttttgaacataactgcAttgcatcgataactcttctgatggcctttgatactcttgaccGgtaagtgaacaacagaacgaccaatAttggtatgtactaCctctgtttcttattataagtcgttttgaCctatttcctaattagtttatagAaaaatttagcAacatttataatacctaattagtttcattaaaactaatatgcaatataTattgataatacatttgttttgtgttgaaaatatttctatatttttctacagactgatcaaacTtaaaaaagttgactataaaaaaaaagtcAaaacgaattataatatgaaacagagggaGtagtaatttctcgtaaaaccaggacaaaactcaagTttaagtaaaacTggattattacaaccaaaatatatcatgcatggaggggaattgtttctactcaagtcgttggaCcaacgcatggaggggaattgtttctagttaaccttcttGGgagatttggatcatataacctccgtttagattttAAaaaagttgacatgtgaggtcatgTgaggtcgctgagactccttcctcaattgAgatataaggagaaggtatatgatcaaatttttactgtagctaacctatgtttccatgggtcacccaaaattcatgcacAattgacaattcctcacgtttcgaatcaacTctgtaacggaagacccaaccagaacaagaatagggagagaccatggatgacccagaataactcccttgttttgcactaaacttagaagtgcattcttggtccattcatgccctccatcctaacGgattattctctcaaccccacgaaccattcaacgcgaagtctgcacgcatttttactcttttccttccaacaaagcaatcattcccctgttttgctgccaattgcagctttcaagcatggcaagacgaataagagaccctttttcttaattttgtttggtcattccctttcagctttgattttcctggtatgacatGaagcattgttcagattatttgttgtctgaagcccttatcaagatttgattccaggtttgtatttccctatctgatcttcaagttgttttcttctgataatgaggttccccatgctgtggtaccggttttatttgatgttgatagccatagcctttcagaatttcctccataatgagtagtcttagcgcaatgcaatttcaacatcccttacaggatTCatcatagtgcaaatgacctaaaagtttcgaaattatgagtttaatacatttaaagttgtaaaaacttgctaaatgttcagtttcaaattcattttagatttcaataaacaaagaataagcacaatcaacctaaactgttcatcaagcggctagcaacttgtcAaAGGAGTCCTGCGAGTAGCAGAACATTTTTTTTCATTTCTTTTTGATAAATGAAGCTTTCTTAATCTCAAACAATTACATCCAGGTGATAAAATTATACTAAGACTACTCCTAATTTAAGTTTTTCCTTTTTAAAAAAAAAATAGATTAGATTAAACCCGGCCTCTGCACCTTTGTGGGGTATATACAGCCAAACAAAGTCACGAGTACGTAAGATTTTGCCATTACATGGGAAAAAAAACTAAGTTTAACAGATCCGGAAAGAAGAACAAAAGACTAAGCTTCGATTCTTCTTCTAAAATTCCAACCAAAAGTAAAGTAAAACTCCAAGACTCGTTTTCTTCTTCAGTTTTACCTGCATTGTAATTTTTTTTTCATTTTCCAGTTTTTACACTTTCACTCAAATTACCTATCAAATTTTGACATTCTGCCCTGTGAAGTTTCAGATTACCTAGAAACTCAAGCTTTCAATAAACTAACAACGATGGAGGACGGCATGGATTTCAGCCCTCATAAaaaatagcacagaacagaatcgaaccagctttgaagaagatgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggtgccggtgacgacgaccgcagcagcagcaacagcaggaacaaaccgtggcgaggccgtcagcaacggcagcctggacagcatcagcagcggcagcacacggagcaacatcctggagagcagcagcaccggcgccgcggcggcgccaacggtgctgacgacatcggcgtcgacggcgtcggtgtcggcgtcggggcagaacgtgaagcggcacaccggcggggacagccggtgggaggcggtccaggcggcgacggcgcgcgacgcgccggcgccgctgagcctggcgcacttccggctgctgaagcggctggggtacggcgacatcgggagcgtgtacctggtggagctccgcggcacgtcggccttcttcgccatgaaggtgatggacaaggcgtcgatcgcgagccggaacaagatggcgcgcgcggagacggagcgcgagatcctgggcctcctcgaccaccccttcctccccacgctctacacccacttcgagaccgacaagttctactgcctcgtcatggagtactgctccggcggcaacctccattccctccggcagaagcagccctccaagcacttctccgagcccgccgccaggtcaggttccacttcggaattttaacaaattgtttccacggagcttGgagcagtttgaggaaattaacctccgtcaagtttgaacaaatttagacagcagtaactttggtaccaggaggcagggttcactccatcggttaaccccttttgatcggaggtcaccgaaatttccaaaatttagttgaatttaaatAaatattactaaaattcatgaaaaaattgaaaagtttaaaaatttcagccgaagtaatattgtatcgtaggggaaatttccagccctggcaggaggtgctaaaatttgcagaataaTtttagaaggatttttagtcattagaaaagtatctcgaggtatttaaatttgacattagaaattttagtaatagtacatgaaggtactaagttttatatttgaaaataaaggagctcccaatatcttttaaggatgataaaattaccctaTTttttaacattgctagagtaaTtaattcgatatgcggtttgacaatactaaccttattagTtgcttgaaaaatcaacgagtgattttcctacgctcgaggatgtaccaagaagcacaatattttctagtatAaattttggtacatttatGtatagtcatgtatcacgattgacaacaaaatatatctatcacctgtacctcatgtatcatcattctattgtagatttgatctgaaaattgaaacttgcgtccgataatttgatctAaaaaaatatgaaacttacgtgggaaaatttgaactttgatgcgtcgtcaggTtttatgtggcagaggtgctactggcgctggagtacctgcacatgctggggatcgtgtacAgggacctcaagccggagaacgtcctggtgagggacgacggccacatcatgctctccgacttcgacctctccctccgctgcaccgtctgccccaccctcatcaagtcctcctccgtccacgccaccggcagcggcggcagcggcagcggcggcggcataggcagcagaggagacgccatcgacggcggcgagagcatgccggcgaaccagggctgcatccagccctcctccttcttcccgcgcatcctgccgcggcgcagccgcaaggcgtccaagagcgacatgggcctgctgctcaacggcgcggcggcggtggagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtGggcacgcacgagtacctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctggggatcttcctctacgagctcatccacggcgccaccccgttcaagggcGccggcaaccgcgccacgctctgcaacgtcatcgagcagccgctccgcttcccctccgacggcggcgccagcgccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgccttcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgctcgtcaggagcctcacgccgccgtcggtgccggagccggtcgacttccggcagtacgccgccgccgcgtccgccaccactcccAaggacaagaagccgccggagaacgccgccgccgccgctgcccccgccgcggcggatggtggcggcgcggccaactcgagcaccggcgagtcctacactgactttgagtatttttaattagtactatatatttattcctgacaatattgttgtgcacaccagattgttttgatcgatggttgtgaagtatgataactcgattcgtgataaTtaagttgtactaactcattcttGgactatggtagattcattgtaaacctAaaattcatatgaaaatgtagcgatttcatttgattgGtttgttatatgtgaacatctgttacttgttattgt

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CDS seq

atgccacccaGtccagggttctcctttggccagatttggcgaggagactggcgggtggtggatcggaagggtcctgggccagttctcagggatggaGgtttgttgaagtcagtcgatggcGgggcgtcggtgctgtgtggtggcagtcctgtcgttggcaggactggaAGCtggccggcggaGgggcgtcggtcaagtgtggcggaagccatatgccGccgatgtttagatggtggtttcggattgggcgacggaccacagcggaatgttacccagagtatgaagctgttccaGactgatttgcagaggagcgcggatgaaTtgaaaggcgcgggaaggaaagtgttcagctcGgcaccacagattatttgttgtctgaagcccttatcaagatttgattccagGACGGCATGGATTTCAGCCCTCATAAaaaatagcacagaacagaatcgaaccagctttgaagaagatgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggtgccggtgacgacgaccgcagcagcagcaacagcaggaacaaaccgtggcgaggccgtcagcaacggcagcctggacagcatcagcagcggcagcacacggagcaacatcctggagagcagcagcaccggcgccgcggcggcgccaacggtgctgacgacatcggcgtcgacggcgtcggtgtcggcgtcggggcagaacgtgaagcggcacaccggcggggacagccggtgggaggcggtccaggcggcgacggcgcgcgacgcgccggcgccgctgagcctggcgcacttccggctgctgaagcggctggggtacggcgacatcgggagcgtgtacctggtggagctccgcggcacgtcggccttcttcgccatgaaggtgatggacaaggcgtcgatcgcgagccggaacaagatggcgcgcgcggagacggagcgcgagatcctgggcctcctcgaccaccccttcctccccacgctctacacccacttcgagaccgacaagttctactgcctcgtcatggagtactgctccggcggcaacctccattccctccggcagaagcagccctccaagcacttctccgagcccgccgccaggTtttatgtggcagaggtgctactggcgctggagtacctgcacatgctggggatcgtgtacAgggacctcaagccggagaacgtcctggtgagggacgacggccacatcatgctctccgacttcgacctctccctccgctgcaccgtctgccccaccctcatcaagtcctcctccgtccacgccaccggcagcggcggcagcggcagcggcggcggcataggcagcagaggagacgccatcgacggcggcgagagcatgccggcgaaccagggctgcatccagccctcctccttcttcccgcgcatcctgccgcggcgcagccgcaaggcgtccaagagcgacatgggcctgctgctcaacggcgcggcggcggtggagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtGggcacgcacgagtacctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctggggatcttcctctacgagctcatccacggcgccaccccgttcaagggcGccggcaaccgcgccacgctctgcaacgtcatcgagcagccgctccgcttcccctccgacggcggcgccagcgccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgccttcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgctcgtcaggagcctcacgccgccgtcggtgccggagccggtcgacttccggcagtacgccgccgccgcgtccgccaccactcccAaggacaagaagccgccggagaacgccgccgccgccgctgcccccgccgcggcggatggtggcggcgcggccaactcgagcaccggcgagtcctacactgactttgagtatttttaa

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Protein seq

MPPSPGFSFGQIWRGDWRVVDRKGPGPVLRDGGLLKSVDGGASVLCGGSPVVGRTGSWPAEGRRSSVAEAICRRCLDGGFGLGDGPQRNVTQSMKLFQTDLQRSADELKGAGRKVFSSAPQIICCLKPLSRFDSRTAWISALIKNSTEQNRTSFEEDDQFSIRSAPSKPSPDKKSKPKNKPNHHSDKTANPPPQRPETTAVPVTTTAAAATAGTNRGEAVSNGSLDSISSGSTRSNILESSSTGAAAAPTVLTTSASTASVSASGQNVKRHTGGDSRWEAVQAATARDAPAPLSLAHFRLLKRLGYGDIGSVYLVELRGTSAFFAMKVMDKASIASRNKMARAETEREILGLLDHPFLPTLYTHFETDKFYCLVMEYCSGGNLHSLRQKQPSKHFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVCPTLIKSSSVHATGSGGSGSGGGIGSRGDAIDGGESMPANQGCIQPSSFFPRILPRRSRKASKSDMGLLLNGAAAVEFNAEPTEARSMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELIHGATPFKGAGNRATLCNVIEQPLRFPSDGGASAVARDLIRGLLVKEPHKRIAFTRGATEIKQHPFFDGVNWALVRSLTPPSVPEPVDFRQYAAAASATTPKDKKPPENAAAAAAPAAADGGGAANSSTGESYTDFEYF

Function Serine/threonine-protein kinase AGC1-7 [UniProtKB/Swiss-Prot:Q1PFB9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_05g0008520 OsNaBo_05g0008520.01 Chr05 8316843 8323333 + NAM
CDS seq

atgccacccaGtccagggttctcctttggccagatttggcgaggagactggcgggtggtggatcggaagggtcctgggccagttctcagggatggaGgtttgttgaagtcagtcgatggcGgggcgtcggtgctgtgtggtggcagtcctgtcgttggcaggactggaAGCtggccggcggaGgggcgtcggtcaagtgtggcggaagccatatgccGccgatgtttagatggtggtttcggattgggcgacggaccacagcggaatgttacccagagtatgaagctgttccaGactgatttgcagaggagcgcggatgaaTtgaaaggcgcgggaaggaaagtgttcagctcGgcaccacagattatttgttgtctgaagcccttatcaagatttgattccagGACGGCATGGATTTCAGCCCTCATAAaaaatagcacagaacagaatcgaaccagctttgaagaagatgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggtgccggtgacgacgaccgcagcagcagcaacagcaggaacaaaccgtggcgaggccgtcagcaacggcagcctggacagcatcagcagcggcagcacacggagcaacatcctggagagcagcagcaccggcgccgcggcggcgccaacggtgctgacgacatcggcgtcgacggcgtcggtgtcggcgtcggggcagaacgtgaagcggcacaccggcggggacagccggtgggaggcggtccaggcggcgacggcgcgcgacgcgccggcgccgctgagcctggcgcacttccggctgctgaagcggctggggtacggcgacatcgggagcgtgtacctggtggagctccgcggcacgtcggccttcttcgccatgaaggtgatggacaaggcgtcgatcgcgagccggaacaagatggcgcgcgcggagacggagcgcgagatcctgggcctcctcgaccaccccttcctccccacgctctacacccacttcgagaccgacaagttctactgcctcgtcatggagtactgctccggcggcaacctccattccctccggcagaagcagccctccaagcacttctccgagcccgccgccaggTtttatgtggcagaggtgctactggcgctggagtacctgcacatgctggggatcgtgtacAgggacctcaagccggagaacgtcctggtgagggacgacggccacatcatgctctccgacttcgacctctccctccgctgcaccgtctgccccaccctcatcaagtcctcctccgtccacgccaccggcagcggcggcagcggcagcggcggcggcataggcagcagaggagacgccatcgacggcggcgagagcatgccggcgaaccagggctgcatccagccctcctccttcttcccgcgcatcctgccgcggcgcagccgcaaggcgtccaagagcgacatgggcctgctgctcaacggcgcggcggcggtggagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtGggcacgcacgagtacctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctggggatcttcctctacgagctcatccacggcgccaccccgttcaagggcGccggcaaccgcgccacgctctgcaacgtcatcgagcagccgctccgcttcccctccgacggcggcgccagcgccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgccttcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgctcgtcaggagcctcacgccgccgtcggtgccggagccggtcgacttccggcagtacgccgccgccgcgtccgccaccactcccAaggacaagaagccgccggagaacgccgccgccgccgctgcccccgccgcggcggatggtggcggcgcggccaactcgagcaccggcgagtcctacactgactttgagtatttttaa

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Protein seq

MPPSPGFSFGQIWRGDWRVVDRKGPGPVLRDGGLLKSVDGGASVLCGGSPVVGRTGSWPAEGRRSSVAEAICRRCLDGGFGLGDGPQRNVTQSMKLFQTDLQRSADELKGAGRKVFSSAPQIICCLKPLSRFDSRTAWISALIKNSTEQNRTSFEEDDQFSIRSAPSKPSPDKKSKPKNKPNHHSDKTANPPPQRPETTAVPVTTTAAAATAGTNRGEAVSNGSLDSISSGSTRSNILESSSTGAAAAPTVLTTSASTASVSASGQNVKRHTGGDSRWEAVQAATARDAPAPLSLAHFRLLKRLGYGDIGSVYLVELRGTSAFFAMKVMDKASIASRNKMARAETEREILGLLDHPFLPTLYTHFETDKFYCLVMEYCSGGNLHSLRQKQPSKHFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVCPTLIKSSSVHATGSGGSGSGGGIGSRGDAIDGGESMPANQGCIQPSSFFPRILPRRSRKASKSDMGLLLNGAAAVEFNAEPTEARSMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELIHGATPFKGAGNRATLCNVIEQPLRFPSDGGASAVARDLIRGLLVKEPHKRIAFTRGATEIKQHPFFDGVNWALVRSLTPPSVPEPVDFRQYAAAASATTPKDKKPPENAAAAAAPAAADGGGAANSSTGESYTDFEYF

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_05g0008520 OsNaBo_05g0008520.02 Chr05 8319644 8323299 + IsoSeq
CDS seq

atgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggtgc

Protein seq

MINSAFDQHPPNHLQTRNRSPRTSRIITPTRRRTRRRRGPRRRRC

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr05 8319790 8320607 + OsNaBo_05g0008520.02 OsNaBo_05g0008520.02,OsNaBo_05g0008520.01 All

Expression

Leaf Root Panicle
FPKM 0.000000 2.805933 6.891221

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0237400 RBH 0.0 0.0 0.738145
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g14750 RBH 0.0 0.0 0.322101
Nipponbare | IRGSP 1.0 | RAP-db Os05g0237400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0008420 RBH 0.0 0.0 1.914095
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0008470 RBH 0.0 0.0 2.141462
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0008350 RBH 0.0 0.0 2.878816
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0008430 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0008500 RBH 0.0 1.592620 2.284526
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0125800 RBH 0.0367965 0.032132 0.049864
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0008340 RBH 0.0 0.0 1.420100
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0125600 RBH 0.0209595 0.017256 0.0260795
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0008380 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0008330 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0008420 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0008490 RBH 0.0 0.0 0.341590
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0008440 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G008240 RBH 0.000000 1.360807 2.965966
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0009070 RBH 0.0 0.0 2.481492
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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