Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_04g0014770 OGI:04068590 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr04:22173181-22181240
Gene Symbol -
DNA seq

gtcctccaatcccccgcgacaatcgccacaaattcccccgcgccgcgccagccacacccacacgcgcgcgccggccagcctacgcttttcccctccccccctcccccgcaacgagccgcggcggaaggaaggatggggagccttggcggggaggagggggcgaggccggctgcggcggcggagggggcgcggaggccgaggttcctgtgcctgcacgggttccggacgagcggggagatcatgcggaagcaggtggtggggaagtggcccgccgacgtcacggcgcgcctcgacctcgtcttcgccgacgcgccgttccccgccgaggggaagtccgacgtcgagggcatcttcgacccgccctactacgagtggttccagttcgacaaggtccgccctccgccgccgccctttcacctgatctgacttttttttcctaagcggatctgaatttgattcccccctactcgtgttcatggtcttcctctgttcttggtacagaattttacagagtacaggaatctcgacgaatgcctgaactacatcgaggaattgatgattaaagaagggccttttgatggactgatgggtttctctcaggtagtattgaattttggtctaaagaattaattcatggactaattctcattcaaccgtatcatatatggtgacaagttgtcgatttaaatataccagggctcgattctatctggcgcccttccgggcctccaagaacaagtaagcaatttgtaattgtttttagttgttactagaacattgaagggttgaaatcagctcgattaatttcttgctgtctttaaaacagctacatattcgtttagcttttttatttaactctgtatttcctctgcaggggttggccctgactagagttcctaagatcaagtacctcataatcataggaggcgccaagtttcagtcgccgacggttgccgagaaggcgtacgccaataacatcaaatgcccctcggttcacttcctcggtacttcactatcttttctaaggaacaaaaacagattgcgtcgatgttattctagtttgttgtcgccactttagcatatttcttgctagcttgtaagttgaccgttgcttccaaggcggtgccttcgccgccTtttttctttaaaaaaaataacagccagcatatctggaatgtttattggcccatgtttattagtttaaggctgcgtgcataaaaaaaaactcgcatcaacagtgtgcttttatatttctaataaaaagaaaaactatgcgcttctcatgccatcatgtttttcagtcaaatcttccagaagctcaacgaattcttcactgttatactaattgagtgcttaacaatttgataacttagactatgtataacaattttgtgaatgaaggagcgctaatatataaacaataaatttagtggtctgactacgtcctctcctattcagcgagtaattatgtgctaatacgctcgggtcaatttcatgctactattcagttaattaaattagaagccctcagttccgttctagtaccattttcatgtcagctgttctttagaaaattacgagaagtaccgagtggttagaataatggatggtcactgagcaagaatttcaatcttatttgcaggtgacactgactttctgaaaacccatggcgaaaagcttatagaatcatatgtggatccattcatcatacgtcatccaaagggccacactgttccaaggcttggtaagctcatctgtcctgtaggatttagttcattcagggagtggttagcccaccggtgtaccaaaatcgatgcttagtactaaaagagttttagaagaaacatgcgaaagaatttagaagaaacatgagaggaaattcgtcgttggaggccgctgaaaccaaaaatatgtagctggaaaacaaacgttgtcattgctctgttgcagtctaattctgtaacctataactttgtgcgcttgtgaaacagaagaacgtatgcattacagtgagctttagtttttttttaaaggaatcagcacgagattgtgctattttattagatataaaatacatctcctaggggcaagaaaataactgtacataaacgctatgattaagTtgggagaaattcttcgagtcgccttgcgtctgacttgatctaggctcttgcctctttgtttattttcgtcataaggttgggggggggcgctgtttccttgcgctcgaagatactttggttcctttctttccagatttcccaggcgacgagtaggattaaggatagtagcccTttttggacacttcctttttgttagctagcattttccaccattcgtggacactttggcatggctcaagtggctcggatcccattgctgataaccagtgagctttagttgattagtgaagtgaactctttccgccgtaatatcagtgttaaaactgtcaaagtaacaccattcttaatattgtttatgcagatgagaagagtctggaaatcatgctccgtttcctcgacaagattgagaaggagacggcgctcgagcattcatccactgatgttgacgaaaaggaaatgtacttgtgaagggtagaagattagtgtccagtccagatacacaccaaattcatactatagacaagcatactgttgtacttgtatcctccTtatttatgtggtggtacaaagagttgaaaactattgaataatcacgcaaaagaatggatgtgtactctttaatttgtctcttcaccgtgtcttgagattgcagcacactgcacatacacatccagttcctaacggtcgggggagctcattcttttcaactcgagtactccctgtgtcccaaaatatcacatccgatgatgtgattagacctatctacaatgaatctgaacacaacctcttaaatatggcttttatctgaacacaaCctcttaaatatggctagataaaagcgttaggatgtccaaaatacAaaaaaaaaatgacaaatacctagtccaaaacgaaaagattggatagaggatagtctaaactgacacttacttccttcattccataaaaaaaaccaatcctaggtttaaatctggaccaaaaggtttgatcctgattcaaacccaatattgagTtttggtaataaaaagtgatccaaagtgcaatcaactcatttgtgtttaaaatgtgtagtttcgtgagattttgtggaaatatgatgttatttgaatcttgcaaaattccaaaattttgcggagttccatcaacgttggttaatgggccgcatgggcagcccatgtcaagagattcaggcccgtgtctgcgcttactgcactgcagctgcacacacctcttctctagtcgcggttcgctcgagaggaacgcggcggagcacagcagaggcgagatggcggcggttttcctccgcgccgccgctcgtgccacgaggtcctccacgctcgtccgcgccatcctcgcgagccggagccccctctcgtcgtcctcctgtgccgcctcccctacgaccgcggcgcccgtccccggcaccgcgccgcgcgccgccgcggctggcgatggcgacgagggatgcgcggcggccgcggccacgcccgcggacgtgggaggggacgaggacgacctgagaagccgcgtcttccggctgcgcctggcgaagcggagcgcgaccgcggcgctcgagaggtgggccggggaaggccgcgccgcgtcggcggcggagctccgcggcatcgcccgcgacctcagccgcgcaggccggtacaagcacgcgctcgaggtttggccgaccgacccgctatagctctgatctcttctaatcgttcgtctgttctgcgcggttgtagaactattggaagattcagagcagatttggtgcatgcctctgtgatctgttccttgtactccttgaaattgctaggaaatgttggtgattggtgatgcggttctatctagtcgttgaaaaatgttaggtggcgtatttactgccttccaccatggttgttgtgatggaacattccggtcatttacgcgcttttagctttgcccttcattttctattactgataggtagtgaaaaaggcttttgatgaactcatctagacatctagtagtattgacgtgtaaggagctgtaatttgttgtcatcataattgcaggccaaatactgccatttcaacactttatccatgtatatcatgctgtttcattacatttggtaatgaatgttaactatcatgaggggtgttatttacatgctgggctactatctctaggtctctacagtctacttataccatcactaaatttgttgtcgtcgaaattgcaggccatatatttttgaacattttatctctgccatatcatgctatttcacttcacttggaaatgaatgttaaccatcatgaggggcgttatttatgagctgatctactatctttaggtctctgcagtctacatacatcattaccgaatttgttgtcatcagaattgcatgtttttgaacattttatccataccatatcatgctatttcacttcatttagaaatgaatgccaaccagcatgagaggtgttatttacatgctgagctactatttttaggtctccacatacaccattactaaattaaataggccagattctctctcacacccacccacccaaaaaggccagcatacttgttcttggtatattggtaacaatcatgatagaatggattgaaaagatttagccaccaaacatttacttggtcagagttaatagagcatgcccatttagtcccTtttttatctgattgtttatactgatgccctatggaacattgtaagcatgataaaacaatttggtaatgtctggcatgtttatcctcctataaaattatgtcaaaactcaaaatagtcagctcataccttaaaattttacaggtagcagagtggatgaagacacatcatgagtccgatttatctgagaatgactacggaatgcgcattgacttgattaccagagTttttggtgctaatgcagctgaagatttttttgagaaacttccagcttgtgtgcaatcactggaagcatatacagctctcctacattcttatgctcgatccaagatgacagacaaagctgagaggctgtttaaaagaatgaaggatgccaacctttccatgaatatccttgtttacaatgaaatgatgaccctgtacatttctgttggtgagcttgataaagttccggtcattgctgaagagctgaaaaggcaaaaattttccccagacctcttcacatacaatctccggatcagcgcttctgcggcatcaatggatctggagggcttcaaaggaatccttgatgagatgtcaaaagatccaaactccaatgaagggtggaagctgtaccagaacctcactgtgatttacgtcgacgctggtcagcttgttggttcaggaaactcgctggtggaagcagaggcgaagatcagccagagggagtggatcacatacgatttcctcgtaatcttacacactgggctcggcaaccgggatagaatcaaggacatttggaaatccatgctgatgacttcacagaggatgacgagtcggaactacatctgcgtgctctcatcctacctgatgtgcgggcagctgaaggatgccggggaagtcatcgaccagtggcagcggtcgaaagccccagagttcgacatctctgcctgcaataggctgtttgatgccttcctgaacgccggtttcaccgacacggcaaatagcttcagggaactgatgctgcaaaagagctgtatactgacaagcaggcaagaacgctcttcctgagtggccatccatgctgaaactgttgagtaggattatgtcattacatgatgcaataataatagatactttccagttggttgctacctggagatcttgtatgtccgtgctaactacattctcctgttctttctggcctactactaatttctagctacaatgatgcattgtttagtttcagaaacaagacaggtacagctgctccacaacatcgcctgtgagatggccacctcaccaggttctccaagttcgtcgtatgcgtcgtatgctcaccacgcggatggttaggcgtgaaactcccatataaaacttttttacacttacagtccacatgatttccaggcctttctcttggtactttcatttacctcatcaggcatcatcatcgtcatcgtcattgacatcgacattgataacctccaaaaccttgaaaattcccagtgtcagcacacgcttgacaacttacaggtacatacaagtaagcttctcctacttaattaggcacccctgggaacatgtcgcattcacagtgtcaggcttaactagtcaaccccaaaagatcaaaagaaaagaaaagaaaggcaggttctctgtatttcgtgtgataaaagagcaaatgaaaaaaaaggcaggtaaaacaggttagagtcagccagtcaggcatccattgaaggggatatgaatatgatgaggttccatttccgagcttccaaccaggaggaggaaagataaggaggagaggttggcaattggggaaagaattggtggtttcggctcccactcgcggccgatttctttcaggatttctccctgtcgtcaaggcccgaatcctactgaggtagacaagaaggttcgtgcggttggagcgatggggacgcgcgagctcctcgtcgttcttgccgtcgtcgtcatggccgccgtcggcgccggcgcgcagtcttcttcggcgtcgccggcgccggcgacgtcgcaggcaccgacggtgcggcagcagacgccgttcgggcggaccatgtcgaccgtcatcacggtgtccatcagcgtgttcttcttcctgctcttcttctgcgcgtacatcaaccagtgccgcctcgccgaggccggggacgccagggccgcggcggcggcggcggccggcgggggagccggaggagggccgtccaggagagggaagcgcgggctggacccggcggtggtggccacgttcccgatcgtgccgtacagggaggtggtgaagcacaagatcggcaagagcgtgctggagtgcgccgtgtgcctgacgtcgttcgacgacggcgacgacctccggctgctgccgcactgctcgcacgcgttccacccggagtgcatcgaCccctggctggagtcccgggtcacgtgcccgctgtgccgcgccaacctcgagaagcctccgccgccgccgccgccgccgccgctgccggcggcggcggcggcgtccccttcgccggagcggtcgccgcggtgccagccttcgccgccgccgcacgccctggtgataccggtggaggacgaggaagacgacagcgacgaggacgacaggaaggaggaggccgtggagctcgagatgctgcgcagcgagcggcgcgccgcgaggctgccgaggtcgcactcgacggggcactcgctggtcgcgtcggcggccgccgccgccgagtccggcgaccacgagcggttcacgctgcggctgccgcagcacgtgcgggacgaggtgctccggtcgctccgcctccgccacgccgccagcctggtcaacctctcggacatgagctccgaggggagctcgaggggaggacggcgtgcattaggcctcgccttcggcaacggcggcgggagcagccacggcggccgccggtggcaggcgttcttggcgaggacggtgtcatgggcgcgaggcggaggcgacggctcggtgcgcaggggctgggacggctcgacgagaagaggaaaagatgacgccgagtcgagcagaaagggggcgacctcaccggcggccggcaggccgtgatcgccgccgacgccggcttcgccaccacgtcggaaaccgcaaaaagaaacAaaaaaaaaatgcgtgctttgcttccatttCtttttcTttttttcatttaggaatccatttctgatagactaatcagtacactgttcttgcatcgtgaggcctgaaattttccaacttcttttgaccctcgcaaagaaaa

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CDS seq

atggcggcggttttcctccgcgccgccgctcgtgccacgaggtcctccacgctcgtccgcgccatcctcgcgagccggagccccctctcgtcgtcctcctgtgccgcctcccctacgaccgcggcgcccgtccccggcaccgcgccgcgcgccgccgcggctggcgatggcgacgagggatgcgcggcggccgcggccacgcccgcggacgtgggaggggacgaggacgacctgagaagccgcgtcttccggctgcgcctggcgaagcggagcgcgaccgcggcgctcgagaggtgggccggggaaggccgcgccgcgtcggcggcggagctccgcggcatcgcccgcgacctcagccgcgcaggccggtacaagcacgcgctcgaggtagcagagtggatgaagacacatcatgagtccgatttatctgagaatgactacggaatgcgcattgacttgattaccagagTttttggtgctaatgcagctgaagatttttttgagaaacttccagcttgtgtgcaatcactggaagcatatacagctctcctacattcttatgctcgatccaagatgacagacaaagctgagaggctgtttaaaagaatgaaggatgccaacctttccatgaatatccttgtttacaatgaaatgatgaccctgtacatttctgttggtgagcttgataaagttccggtcattgctgaagagctgaaaaggcaaaaattttccccagacctcttcacatacaatctccggatcagcgcttctgcggcatcaatggatctggagggcttcaaaggaatccttgatgagatgtcaaaagatccaaactccaatgaagggtggaagctgtaccagaacctcactgtgatttacgtcgacgctggtcagcttgttggttcaggaaactcgctggtggaagcagaggcgaagatcagccagagggagtggatcacatacgatttcctcgtaatcttacacactgggctcggcaaccgggatagaatcaaggacatttggaaatccatgctgatgacttcacagaggatgacgagtcggaactacatctgcgtgctctcatcctacctgatgtgcgggcagctgaaggatgccggggaagtcatcgaccagtggcagcggtcgaaagccccagagttcgacatctctgcctgcaataggctgtttgatgccttcctgaacgccggtttcaccgacacggcaaatagcttcagggaactgatgctgcaaaagagctgcatcatcatcgtcatcgtcattgacatcgacattgataacctccaaaaccttgaaaattcccagtgtcagcacacgcttgacaacttacagcttccaaccaggaggaggaaagataaggaggagaggttggcaattggggaaagaattggtggtttcggctcccactcgcggccgatttctttcaggatttctccctgtcgtcaaggcccgaatcctactgaggtagacaagaaggttcgtgcggttggagcgatggggacgcgcgagctcctcgtcgttcttgccgtcgtcgtcatggccgccgtcggcgccggcgcgcagtcttcttcggcgtcgccggcgccggcgacgtcgcaggcaccgacggtgcggcagcagacgccgttcgggcggaccatgtcgaccgtcatcacggtgtccatcagcgtgttcttcttcctgctcttcttctgcgcgtacatcaaccagtgccgcctcgccgaggccggggacgccagggccgcggcggcggcggcggccggcgggggagccggaggagggccgtccaggagagggaagcgcgggctggacccggcggtggtggccacgttcccgatcgtgccgtacagggaggtggtgaagcacaagatcggcaagagcgtgctggagtgcgccgtgtgcctgacgtcgttcgacgacggcgacgacctccggctgctgccgcactgctcgcacgcgttccacccggagtgcatcgaCccctggctggagtcccgggtcacgtgcccgctgtgccgcgccaacctcgagaagcctccgccgccgccgccgccgccgccgctgccggcggcggcggcggcgtccccttcgccggagcggtcgccgcggtgccagccttcgccgccgccgcacgccctggtgataccggtggaggacgaggaagacgacagcgacgaggacgacaggaaggaggaggccgtggagctcgagatgctgcgcagcgagcggcgcgccgcgaggctgccgaggtcgcactcgacggggcactcgctggtcgcgtcggcggccgccgccgccgagtccggcgaccacgagcggttcacgctgcggctgccgcagcacgtgcgggacgaggtgctccggtcgctccgcctccgccacgccgccagcctggtcaacctctcggacatgagctccgaggggagctcgaggggaggacggcgtgcattaggcctcgccttcggcaacggcggcgggagcagccacggcggccgccggtggcaggcgttcttggcgaggacggtgtcatgggcgcgaggcggaggcgacggctcggtgcgcaggggctgggacggctcgacgagaagaggaaaagatgacgccgagtcgagcagaaagggggcgacctcaccggcggccggcaggccgtga

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Protein seq

MAAVFLRAAARATRSSTLVRAILASRSPLSSSSCAASPTTAAPVPGTAPRAAAAGDGDEGCAAAAATPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLTVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSCIIIVIVIDIDIDNLQNLENSQCQHTLDNLQLPTRRRKDKEERLAIGERIGGFGSHSRPISFRISPCRQGPNPTEVDKKVRAVGAMGTRELLVVLAVVVMAAVGAGAQSSSASPAPATSQAPTVRQQTPFGRTMSTVITVSISVFFFLLFFCAYINQCRLAEAGDARAAAAAAAGGGAGGGPSRRGKRGLDPAVVATFPIVPYREVVKHKIGKSVLECAVCLTSFDDGDDLRLLPHCSHAFHPECIDPWLESRVTCPLCRANLEKPPPPPPPPPLPAAAAASPSPERSPRCQPSPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSERRAARLPRSHSTGHSLVASAAAAAESGDHERFTLRLPQHVRDEVLRSLRLRHAASLVNLSDMSSEGSSRGGRRALGLAFGNGGGSSHGGRRWQAFLARTVSWARGGGDGSVRRGWDGSTRRGKDDAESSRKGATSPAAGRP

Function Pentatricopeptide repeat-containing protein At5g09450, mitochondrial [UniProtKB/Swiss-Prot:Q94B59]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_04g0014770 OsNaBo_04g0014770.01 Chr04 22173181 22181240 + NAM
CDS seq

atggcggcggttttcctccgcgccgccgctcgtgccacgaggtcctccacgctcgtccgcgccatcctcgcgagccggagccccctctcgtcgtcctcctgtgccgcctcccctacgaccgcggcgcccgtccccggcaccgcgccgcgcgccgccgcggctggcgatggcgacgagggatgcgcggcggccgcggccacgcccgcggacgtgggaggggacgaggacgacctgagaagccgcgtcttccggctgcgcctggcgaagcggagcgcgaccgcggcgctcgagaggtgggccggggaaggccgcgccgcgtcggcggcggagctccgcggcatcgcccgcgacctcagccgcgcaggccggtacaagcacgcgctcgaggtagcagagtggatgaagacacatcatgagtccgatttatctgagaatgactacggaatgcgcattgacttgattaccagagTttttggtgctaatgcagctgaagatttttttgagaaacttccagcttgtgtgcaatcactggaagcatatacagctctcctacattcttatgctcgatccaagatgacagacaaagctgagaggctgtttaaaagaatgaaggatgccaacctttccatgaatatccttgtttacaatgaaatgatgaccctgtacatttctgttggtgagcttgataaagttccggtcattgctgaagagctgaaaaggcaaaaattttccccagacctcttcacatacaatctccggatcagcgcttctgcggcatcaatggatctggagggcttcaaaggaatccttgatgagatgtcaaaagatccaaactccaatgaagggtggaagctgtaccagaacctcactgtgatttacgtcgacgctggtcagcttgttggttcaggaaactcgctggtggaagcagaggcgaagatcagccagagggagtggatcacatacgatttcctcgtaatcttacacactgggctcggcaaccgggatagaatcaaggacatttggaaatccatgctgatgacttcacagaggatgacgagtcggaactacatctgcgtgctctcatcctacctgatgtgcgggcagctgaaggatgccggggaagtcatcgaccagtggcagcggtcgaaagccccagagttcgacatctctgcctgcaataggctgtttgatgccttcctgaacgccggtttcaccgacacggcaaatagcttcagggaactgatgctgcaaaagagctgcatcatcatcgtcatcgtcattgacatcgacattgataacctccaaaaccttgaaaattcccagtgtcagcacacgcttgacaacttacagcttccaaccaggaggaggaaagataaggaggagaggttggcaattggggaaagaattggtggtttcggctcccactcgcggccgatttctttcaggatttctccctgtcgtcaaggcccgaatcctactgaggtagacaagaaggttcgtgcggttggagcgatggggacgcgcgagctcctcgtcgttcttgccgtcgtcgtcatggccgccgtcggcgccggcgcgcagtcttcttcggcgtcgccggcgccggcgacgtcgcaggcaccgacggtgcggcagcagacgccgttcgggcggaccatgtcgaccgtcatcacggtgtccatcagcgtgttcttcttcctgctcttcttctgcgcgtacatcaaccagtgccgcctcgccgaggccggggacgccagggccgcggcggcggcggcggccggcgggggagccggaggagggccgtccaggagagggaagcgcgggctggacccggcggtggtggccacgttcccgatcgtgccgtacagggaggtggtgaagcacaagatcggcaagagcgtgctggagtgcgccgtgtgcctgacgtcgttcgacgacggcgacgacctccggctgctgccgcactgctcgcacgcgttccacccggagtgcatcgaCccctggctggagtcccgggtcacgtgcccgctgtgccgcgccaacctcgagaagcctccgccgccgccgccgccgccgccgctgccggcggcggcggcggcgtccccttcgccggagcggtcgccgcggtgccagccttcgccgccgccgcacgccctggtgataccggtggaggacgaggaagacgacagcgacgaggacgacaggaaggaggaggccgtggagctcgagatgctgcgcagcgagcggcgcgccgcgaggctgccgaggtcgcactcgacggggcactcgctggtcgcgtcggcggccgccgccgccgagtccggcgaccacgagcggttcacgctgcggctgccgcagcacgtgcgggacgaggtgctccggtcgctccgcctccgccacgccgccagcctggtcaacctctcggacatgagctccgaggggagctcgaggggaggacggcgtgcattaggcctcgccttcggcaacggcggcgggagcagccacggcggccgccggtggcaggcgttcttggcgaggacggtgtcatgggcgcgaggcggaggcgacggctcggtgcgcaggggctgggacggctcgacgagaagaggaaaagatgacgccgagtcgagcagaaagggggcgacctcaccggcggccggcaggccgtga

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Protein seq

MAAVFLRAAARATRSSTLVRAILASRSPLSSSSCAASPTTAAPVPGTAPRAAAAGDGDEGCAAAAATPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLTVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSCIIIVIVIDIDIDNLQNLENSQCQHTLDNLQLPTRRRKDKEERLAIGERIGGFGSHSRPISFRISPCRQGPNPTEVDKKVRAVGAMGTRELLVVLAVVVMAAVGAGAQSSSASPAPATSQAPTVRQQTPFGRTMSTVITVSISVFFFLLFFCAYINQCRLAEAGDARAAAAAAAGGGAGGGPSRRGKRGLDPAVVATFPIVPYREVVKHKIGKSVLECAVCLTSFDDGDDLRLLPHCSHAFHPECIDPWLESRVTCPLCRANLEKPPPPPPPPPLPAAAAASPSPERSPRCQPSPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSERRAARLPRSHSTGHSLVASAAAAAESGDHERFTLRLPQHVRDEVLRSLRLRHAASLVNLSDMSSEGSSRGGRRALGLAFGNGGGSSHGGRRWQAFLARTVSWARGGGDGSVRRGWDGSTRRGKDDAESSRKGATSPAAGRP

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_04g0014770 OsNaBo_04g0014770.02 Chr04 22173188 22175936 + IsoSeq
CDS seq

atcccccgcgacaatcgccacaaattcccccgcgccgcgccagccacacccacacgcgcgcgccggccagcctacgcttttcccctccccccctcccccgcaacgagccgcggcggaaggaaggatggggagccttggcggggaggagggggcgaggccggctgcggcggcggagggggcgcggaggccgaggttcctgtgcctgcacgggttccggacgagcggggagatcatgcggaagcaggtggtggggaagtggcccgccgacgtcacggcgcgcctcgacctcgtcttcgccgacgcgccgttccccgccgaggggaagtccgacgtcgagggcatcttcgacccgccctactacgagtggttccagttcgacaagaattttacagagtacaggaatctcgacgaatgcctgaactacatcgaggaattgat

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Protein seq

IPRDNRHKFPRAAPATPTRARRPAYAFPLPPSPATSRGGRKDGEPWRGGGGEAGCGGGGGAEAEVPVPARVPDERGDHAEAGGGEVARRRHGAPRPRLRRRAVPRRGEVRRRGHLRPALLRVVPVRQEFYRVQESRRMPELHRGID

OsNaBo_04g0014770.02OsNaBo_04g0014770.01AS22173081 bp22174000 bp22176000 bp22178000 bp22180000 bp22182000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr04 22174184 22175665 + OsNaBo_04g0014770.02 OsNaBo_04g0014770.02,OsNaBo_04g0014770.01 All

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 35.427826

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0450300 RBH 0.0 0.321057 0.327376
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g37730 RBH 0.0 0.261245 0.146407
Nipponbare | IRGSP 1.0 | RAP-db Os04g0450300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0015130 RBH 0.000000 63.848682 9.188265
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0016000 RBH 0.0 0.707040 0.416737
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0015720 RBH 0.000000 0.000000 1.783106
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0015300 RBH 0.0 0.041336 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0015620 RBH 32.047806 31.702349 42.784405
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0350400 RBH 0.6662925 9.4854345 8.5039815
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0014470 RBH 0.000000 0.562425 0.086488
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0347200 RBH 1.1547845 12.482828 2.652111
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0015090 RBH 0.132769 0.014571 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0014810 RBH 0.000000 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0014850 RBH 1.146890 4.592172 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0015450 RBH 0.0 0.333946 0.307588
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0015600 RBH 0.108493 4.139742 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G014700 RBH 0.0 0.622850 0.847498
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0021830 RBH 0.0 0.0 0.0
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Huazhong Agricultural University

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