Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0040540 | OGI:03098780 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:37859917-37864295 | ||||||||
| Gene Symbol | WAK28, OsWAK28 | ||||||||||
| DNA seq | aaccactccacaaaaatagatagagctactgcatacagagaaatcgattggtctgtgccattcattttgtacagtctacaaaaataagcgaaaaataaataaatcattacaagggtcgaaacaaatacaatcagcgaggaaactgtgaagagtacatcatctctctctccatggtatagcacctagagacaacctgatattctggattagcaacaaggcccatttcaacattcttgttgctgttcagggaagtacatttgtacttcggagtacattcttgttccttgtatgccctcgatcttgcagctcttaggagttgcagtcttaactccacttctttcattttaggtctctttgctcctttagtctttaagcacatctctgcaactgaggcaattccatcaatctctgtttggctagcttcctctacaacttgagaatccagtatatccattgttgttttatctcttaggctttgaagaaaacagtggcacaaatttttctgttcaccaagacagttgagaaaaattggcttcttccttgttaggagttcaacaagtatcacaccgaaactataaacatcactcttctcggttaattggcttgtatagaaatattctggatctaagtacccaaatgtcccctgtactattgtaactacgcgagtttgatcaatggaaatggacctagaagcaccgaaatctgaaaccttagcagtgaaggtaccatccaagagtatattagttgatttcacatctctatggaatattggcattgcagcagaggaatggagataagcaagtgcccctgcagcctctagagcaatcctcattcgatcatcccatgtcaacaaacaattggtgctcagatcaccatgaagaagaccatgaagtgtgccattagaaatgaattcatacactagaagaggcacctcagattcaaggcaacaaccaaaaagtttcaccacattacgatgaataatctgggaaaggatggcaacctcattaacaaattggtcaatctcactcttctccacaattttggacctctttatggcaaccactcgttgatcggataaaatccccttgtaaacagtaccatggcctccatatccaaggatacgtgttgagtcaaagttgttggttgctttctctaaatcttccaaagaaaatattcttgtgttaggagtaacattgttactggatgagatcagctgctccaagagaaggcctttgttttttcggaagtatgcccttcgaattttcttccgagtgcttctcttccaccttttgaataatatagctgcaattaatgtaagagctagaactccaaaaccactgctaatcccaatggcaagtcctacaagagtaattgcaacaattgaaaagttattctttgaggggtttgataacattttcaacaattggaatgcatacatacagcaaacaataaataaaaacctgacatacctaaaacaatattttgcctcttattggaagtgcactgccttcttactcgatcataagacataccatgaggacaacaaatatagcttcctttaaagttataacatgtcccattacaatagtttggtatagagcattcatcaatatctgcaaacagaaaactaaaaatgtgaactttaatatatcaaactcttgatggctcctatatgcttttgttttcaattaaatgcacattaactacaacttccacactatgaaaatcataggataacatatcactctcttcagatattccatatctccatgctcctgccacatacaagaaaatcaaatgcactagatagtagatacattaggaatgtgtacctgtacatccattttggacataaggatttccttcaaatccaagagagcacttgcaacgataaccaatatatagcttcccatgtgtaacatcaagacactcactgtttgtgctaacacatgcatatgcacttttgctttttgcatcttcacacgtcaaattggtcacagaccacttccaaacaccatactcttcagataaatcagacttttccaaaccataaattaattgttggccaaaatatccagaaccaccatagtatactgataaatactttgtgttggcatcttcaaattctgaaagcttgttaacataaaggagtccttcatctaatgatatatttgtcacttcatattttgcaggtggtcttccaataagagtgcgatttgatgcacaactcagttgaaatctcctcttagcaaaacagcctggctcaagcccaaacgggaaaggaatatttgtgctaccacatgatctagaacaattctttttcggggtagggttaaactctgttccagttaagaaacatatatgaccacaaaaaatatgtagtgaattaacaatcaataaagaaaggaacatctgttcagagaggagctagagttgcgtaggtaccttgtttgcaatcatcaagaaggtagggattgccatcatcagaatttcctgggcaagcacaagaataacctccatttgccacatctatgcaattgttactgccacaggcaaattgtgtcttattatccaaccgagctgttggacaatttggttcatctgcgatgacagttgagaggtatgccatggaagcaccaacggtgcttgcatttatcttattggacaggagatccgcaatgctaaaaatgtaaggacggaaggttaagaaagccttgatggtgatattgtcgaagggctgcggtattgtctcgttactcttaacaatggtcactctaaaacctcgaaataacaccgggaatgtgacagtgcagcaacccatgccattgcaaatccctccttcggttgccatgtgcatttcctccatggaggcacacttgatcgtgcaatgacccacaaggttaccagtatctggatggaacaggtaaaccccgatcccacaaccgaggaacgccaagtaattgtaggtctcaacgttgagattcctcccaggagagtcccatgacaagttgtaggtgtcaactccatgaatcatggggatagtgtacatgatagaggcaagaacagttcctgaaggatagaggctaatcacctgagtcttagtgtttctcaagaagagcttcaaaggtttgctggtggtgtcgcaagtaagctcaaagccctgccgaaagcaaccaggcccaataccgtaaggataccagatgttcacttctccacatgttttggggcagggagcaagactagcagcagtgggaggaggtgctccagatgccaccaacatgacagtggatgctatgatccatagcaaaaccagctgcatgctagctattatagtttcttttgttgaacccataagatgagaaacaagaaggtacccaatattatatagtatacatcctctgagaggaattggaaatgtggataaccaatatcaaccagagcagaagttctcccattcattaaaagaaggaaaagaaaacaatttctgtaaccttgccgggtcaagcaaggctagccatgtggagatttgcagatgatcttgggatgcttttaagactcttccccactctcttgacgacatgtaatacttgtgctggagacgaatttcactttctttttggttgaacatattgtagtgcaccagaacgaaacacatcatcatgaacaatttatgtttgacttactgttacacgagacaagagctagcctcgtgtgtgagcaggtagaagatcggtttgaatctgatgcccaattgtgacaacgactaccaaatctaattctagtcaatgcagtatcagagctgtccacatactgtgtggatttatgaacattctaatttgcaaaagaaggcgttgatcaatggaaccatacaggcaattcagcatacaaaaggtctaaaaagatatttggattaaaagatatttgtagggaggtcacagtaaaccaaatcctagggaaattcatgttgcctatccatcttagagcgctggaaaataccatccaattccacagcaactctctccctagttcctccttccatgcaattgcacatgagacaattagagattAaaaaaaaaaagacaagcacttcggggtggaactgaactactgaagaaattcctacgatggcgaactcaaataaaagggagcggatatgccttggaatttgggggagaaacagaaaccgtaggttgttgttgctgctgctgctgctgccatggaagcgcgccaacagcgacacacagcagctcgccgtcgtcgcgcgccatcccccgcctcgcggtcgcggatgcctccgcgccggcgccgcctcgccgcccgccgccgccgcggtctcgggacccccacgacggcgacgagcgagactcgcaccgccacag
More
|
||||||||||
| CDS seq | atgggttcaacaaaagaaactataatagctagcatgcagctggttttgctatggatcatagcatccactgtcatgttggtggcatctggagcacctcctcccactgctgctagtcttgctccctgccccaaaacatgtggagaagtgaacatctggtatccttacggtattgggcctggttgctttcggcagggctttgagcttacttgcgacaccaccagcaaacctttgaagctcttcttgagaaacactaagactcaggtgattagcctctatccttcaggaactgttcttgcctctatcatgtacactatccccatgattcatggagttgacacctacaacttgtcatgggactctcctgggaggaatctcaacgttgagacctacaattacttggcgttcctcggttgtgggatcggggtttacctgttccatccagatactggtaaccttgtgggtcattgcacgatcaagtgtgcctccatggaggaaatgcacatggcaaccgaaggagggatttgcaatggcatgggttgctgcactgtcacattcccggtgttatttcgaggttttagagtgaccattgttaagagtaacgagacaataccgcagcccttcgacaatatcaccatcaaggctttcttaaccttccgtccttacatttttagcattgcggatctcctgtccaataagataaatgcaagcaccgttggtgcttccatggcatacctctcaactgtcatcgcagatgaaccaaattgtccaacagctcggttggataataagacacaatttgcctgtggcagtaacaattgcatagatgtggcaaatggaggttattcttgtgcttgcccaggaaattctgatgatggcaatccctaccttcttgatgattgcaaacaagagtttaaccctaccccgaaaaagaattgttctagatcatgtggtagcacaaatattcctttcccgtttgggcttgagccaggctgttttgctaagaggagatttcaactgagttgtgcatcaaatcgcactcttattggaagaccacctgcaaaatatgaagtgacaaatatatcattagatgaaggactcctttatgttaacaagctttcagaatttgaagatgccaacacaaagtatttatcagtatactatggtggttctggatattttggccaacaattaatttatggtttggaaaagtctgatttatctgaagagtatggtgtttggaagtggtctgtgaccaatttgacgtgtgaagatgcaaaaagcaaaagtgcatatgcatgtgttagcacaaacagtgagtgtcttgatgttacacatgggaagctatatattggttatcgttgcaagtgctctcttggatttgaaggaaatccttatgtccaaaatggatgtacagatattgatgaatgctctataccaaactattgtaatgggacatgttataactttaaaggaagctatatttgttgtcctcatggtatgtcttatgatcgagtaagaaggcagtgcacttccaataagaggcaaaatattgttttaggacttgccattgggattagcagtggttttggagttctagctcttacattaattgcagctatattattcaaaaggtggaagagaagcactcggaagaaaattcgaagggcatacttccgaaaaaacaaaggccttctcttggagcagctgatctcatccagtaacaatgttactcctaacacaagaatattttctttggaagatttagagaaagcaaccaacaactttgactcaacacgtatccttggatatggaggccatggtactgtttacaaggggattttatccgatcaacgagtggttgccataaagaggtccaaaattgtggagaagagtgagattgaccaatttgttaatgaggttgccatcctttcccagattattcatcgtaatgtggtgaaactttttggttgttgccttgaatctgaggtgcctcttctagtgtatgaattcatttctaatggcacacttcatggtcttcttcatggtgatctgagcaccaattgtttgttgacatgggatgatcgaatgaggattgctctagaggctgcaggggcacttgcttatctccattcctctgctgcaatgccaatattccatagagatgtgaaatcaactaatatactcttggatggtaccttcactgctaaggtttcagatttcggtgcttctaggtccatttccattgatcaaactcgcgtagttacaatagtacaggggacatttgggtacttagatccagaatatttctatacaagccaattaaccgagaagagtgatgtttatagtttcggtgtgatacttgttgaactcctaacaaggaagaagccaatttttctcaactgtcttggtgaacagaaaaatttgtgccactgttttcttcaaagcctaagagataaaacaacaatggatatactggattctcaagttgtagaggaagctagccaaacagagattgatggaattgcctcagttgcagagatgtgcttaaagactaaaggagcaaagagacctaaaatgaaagaagtggagttaagactgcaactcctaagagctgcaagatcgagggcatacaaggaacaagaatgtactccgaagtacaaatgtacttccctgaacagcaacaagaatgttgaaatgggccttgttgctaatccagaatatcaggttgtctctaggtgctataccatggagagagagatgatgtactcttcacagtttcctcgctga
More
|
||||||||||
| Protein seq | MGSTKETIIASMQLVLLWIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLRNTKTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFDNITIKAFLTFRPYIFSIADLLSNKINASTVGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVYYGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFEGNPYVQNGCTDIDECSIPNYCNGTCYNFKGSYICCPHGMSYDRVRRQCTSNKRQNIVLGLAIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNFDSTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEKSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTAKVSDFGASRSISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKTTMDILDSQVVEEASQTEIDGIASVAEMCLKTKGAKRPKMKEVELRLQLLRAARSRAYKEQECTPKYKCTSLNSNKNVEMGLVANPEYQVVSRCYTMEREMMYSSQFPR |
||||||||||
| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0040540 | OsNaBo_03g0040540.01 | Chr03 | 37859917 | 37864295 | - | NAM | ||
| CDS seq | atgggttcaacaaaagaaactataatagctagcatgcagctggttttgctatggatcatagcatccactgtcatgttggtggcatctggagcacctcctcccactgctgctagtcttgctccctgccccaaaacatgtggagaagtgaacatctggtatccttacggtattgggcctggttgctttcggcagggctttgagcttacttgcgacaccaccagcaaacctttgaagctcttcttgagaaacactaagactcaggtgattagcctctatccttcaggaactgttcttgcctctatcatgtacactatccccatgattcatggagttgacacctacaacttgtcatgggactctcctgggaggaatctcaacgttgagacctacaattacttggcgttcctcggttgtgggatcggggtttacctgttccatccagatactggtaaccttgtgggtcattgcacgatcaagtgtgcctccatggaggaaatgcacatggcaaccgaaggagggatttgcaatggcatgggttgctgcactgtcacattcccggtgttatttcgaggttttagagtgaccattgttaagagtaacgagacaataccgcagcccttcgacaatatcaccatcaaggctttcttaaccttccgtccttacatttttagcattgcggatctcctgtccaataagataaatgcaagcaccgttggtgcttccatggcatacctctcaactgtcatcgcagatgaaccaaattgtccaacagctcggttggataataagacacaatttgcctgtggcagtaacaattgcatagatgtggcaaatggaggttattcttgtgcttgcccaggaaattctgatgatggcaatccctaccttcttgatgattgcaaacaagagtttaaccctaccccgaaaaagaattgttctagatcatgtggtagcacaaatattcctttcccgtttgggcttgagccaggctgttttgctaagaggagatttcaactgagttgtgcatcaaatcgcactcttattggaagaccacctgcaaaatatgaagtgacaaatatatcattagatgaaggactcctttatgttaacaagctttcagaatttgaagatgccaacacaaagtatttatcagtatactatggtggttctggatattttggccaacaattaatttatggtttggaaaagtctgatttatctgaagagtatggtgtttggaagtggtctgtgaccaatttgacgtgtgaagatgcaaaaagcaaaagtgcatatgcatgtgttagcacaaacagtgagtgtcttgatgttacacatgggaagctatatattggttatcgttgcaagtgctctcttggatttgaaggaaatccttatgtccaaaatggatgtacagatattgatgaatgctctataccaaactattgtaatgggacatgttataactttaaaggaagctatatttgttgtcctcatggtatgtcttatgatcgagtaagaaggcagtgcacttccaataagaggcaaaatattgttttaggacttgccattgggattagcagtggttttggagttctagctcttacattaattgcagctatattattcaaaaggtggaagagaagcactcggaagaaaattcgaagggcatacttccgaaaaaacaaaggccttctcttggagcagctgatctcatccagtaacaatgttactcctaacacaagaatattttctttggaagatttagagaaagcaaccaacaactttgactcaacacgtatccttggatatggaggccatggtactgtttacaaggggattttatccgatcaacgagtggttgccataaagaggtccaaaattgtggagaagagtgagattgaccaatttgttaatgaggttgccatcctttcccagattattcatcgtaatgtggtgaaactttttggttgttgccttgaatctgaggtgcctcttctagtgtatgaattcatttctaatggcacacttcatggtcttcttcatggtgatctgagcaccaattgtttgttgacatgggatgatcgaatgaggattgctctagaggctgcaggggcacttgcttatctccattcctctgctgcaatgccaatattccatagagatgtgaaatcaactaatatactcttggatggtaccttcactgctaaggtttcagatttcggtgcttctaggtccatttccattgatcaaactcgcgtagttacaatagtacaggggacatttgggtacttagatccagaatatttctatacaagccaattaaccgagaagagtgatgtttatagtttcggtgtgatacttgttgaactcctaacaaggaagaagccaatttttctcaactgtcttggtgaacagaaaaatttgtgccactgttttcttcaaagcctaagagataaaacaacaatggatatactggattctcaagttgtagaggaagctagccaaacagagattgatggaattgcctcagttgcagagatgtgcttaaagactaaaggagcaaagagacctaaaatgaaagaagtggagttaagactgcaactcctaagagctgcaagatcgagggcatacaaggaacaagaatgtactccgaagtacaaatgtacttccctgaacagcaacaagaatgttgaaatgggccttgttgctaatccagaatatcaggttgtctctaggtgctataccatggagagagagatgatgtactcttcacagtttcctcgctga
More
|
|||||||
| Protein seq | MGSTKETIIASMQLVLLWIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLRNTKTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFDNITIKAFLTFRPYIFSIADLLSNKINASTVGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVYYGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFEGNPYVQNGCTDIDECSIPNYCNGTCYNFKGSYICCPHGMSYDRVRRQCTSNKRQNIVLGLAIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNFDSTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEKSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTAKVSDFGASRSISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKTTMDILDSQVVEEASQTEIDGIASVAEMCLKTKGAKRPKMKEVELRLQLLRAARSRAYKEQECTPKYKCTSLNSNKNVEMGLVANPEYQVVSRCYTMEREMMYSSQFPR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.654908 | 6.574251 | 1.513622 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0841100 | RBH | 0.947163 | 0.324736 | 0.514060 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g62430 | RBH | 0.630160 | 0.310452 | 0.130189 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0841100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041520 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0041220 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0041280 | RBH | 0.491563 | 0.0 | 2.182140 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0041510 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0041030 | RBH | 3.674425 | 1.183783 | 8.035265 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0603800 | RBH | 3.6035375 | 5.426689 | 1.5212625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0040770 | RBH | 0.138357 | 0.0 | 0.684264 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0606300 | RBH | 2.7645215 | 5.6929965 | 2.535318 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0041340 | RBH | 0.174841 | 0.034425 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0041260 | RBH | 0.250550 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040960 | RBH | 2.823882 | 5.411603 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0041020 | RBH | 0.696575 | 0.573087 | 0.974325 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0041060 | RBH | 0.319973 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G040830 | RBH | 0.521105 | 0.957404 | 0.254220 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0040350 | SBH | 0.774254 | 9.322786 | 3.289850 |
