Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_03g0041020 | OGI:03098780 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:38276715-38280066 | ||||||||
Gene Symbol | WAK28, OsWAK28 | ||||||||||
DNA seq | aaccactccacaaaaatagatagagctgctgcatacagagaaatcgattggtctgtgccattcattttgtacagtctacaaaaataagcgaaaaataaataaatcattacaagggtcgaaacaaatacaatcagcgaggaaactgtgaagagtacatcatctctctctccatggtatagcacctagagacaacctgatattctggattagcaacaaggcccatttcaacattcttgttgctgttcagggaagtacatttgtacttcggagtacattcttgttccttgtatgccctcgatcttgcagctcttaggagttgcagtcttaactccacttctttcattttaggtctctttgctcctttagtctttaagcacatctctgcaactgaggcaattccatcaatctctgtttggctagcttcctctacaacttgagaatccagtatatccattgttgttttatctcttaggctttgaagaaaacagtggcacaaatttttctgttcaccaagacagttgagaaaaattggcttcttccttgttaggagttcgacaagtatcacaccgaaactataaacatcactcttctcggttaattggcttgtatagaaatattctggatctaagtacccaaatgtcccctgtactattgtaactacgcgagtttgatcaatggaaatggacctagaagcaccgaaatctgaaaccttagcagtgaaggtaccatccaagagtatattagttgatttcacatctctatggaatattggcattgcagcagaggaatggagataagcaagtgcccctgcagcctctagagcaatcctcattcgatcatcccatgtcaacaaacaattggtgctcagatcaccatgaagaagaccatgaagtgtgccattagaaatgaattcatacactagaagaggcacctcagattcaaggcaacaaccaaaaagtttcaccacattacgatgaataatctgggaaaggatggcaacctcattaacaaattggtcaatctcactcttctccacaattttggacctctttatggcaaccactcgttgatcggataaaatccccttgtaaacagtaccatggcctccatatccaaggatacgtgttgagtcaaagttgttggttgctttctctaaatcttccaaagaaaatattcttgtgttaggagtaacattgttactggatgagatcagctgctccaagagaaggcctttgttttttcggaagtatgcccttcgaattttcttccgagtgcttctcttccaccttttgaataatatagctgcaattaatgtaagagctagaactccaaaaccactgctaatcccaatggtaagtcctacaagagtaattgcaacaattgaaaagttattctttgaggggtttgataacattttcaacaattggaatgcatacatacagcaaacaataaataaaaacctgacatacctaaaacaatattttgcctcttattggaagtgcactgccttcttactcgatcataagacataccatgaggacaacaaatatagcttcctttaaagttataacatgtcccattacaatagtttggtatagagcattcatcaatatctgcaaacagaaaactaaaaatgtgaactttaatatatcaaactcttgatggctcctatatgcttttgttttcaattaaacgcacattaactacaacttccacactatgaaaatcataggataacatatcactctcttcagatattccatatctccatgctcctgccacatacaagaaaatcgaatgcactagatagtagatacattaggaatgtgtacctgtacatccattttggacataaggatttccttcaaatccaagagagcacttgcaacgataaccaatatatagcttcccatgtgtaacatcaagacactcactgtttgtgctaacacatgcatatgcacttttgctttttgcatcttcacacgtcaaattggtcacagaccacttccaaacaccatactcttcagataaatcagacttttccaaaccataaattaattgttggccaaaatatccagaaccaccatagtatactgataaatactttgtgttggcatcttcaaattctgaaagcttgttaacataaaggagtccttcatctaatgatatatttgtcacttcatattttgcaggtggtcttccaataagagtgcgatttgatgcacaactcagttgaaatctcctcttagcaaaacagcctggctcaagcccaaacgggaaaggaatatttgtgctaccacatgatctagaacaattctttttcggggtagggttaaactctgttccagttaagaaacatatatgaccacaaaaaatatgtagtgaattaacaatcaataaagaaaggaacatctgttcagagaggagctagagttgcgtaggtaccttgtttgcaatcatcaagaaggtagggattgccatcatcagaatttcctgggcaagcacaagaataacctccatttgccacatctatgcaattgttactgccacaggcaaattgtgtcttattatccaaccgagctgttggacaatttggttcatctgcgatgacagttgagaggtatgccatggaagcaccaacggtgcttgcatttatcttattggacaggagatccgcaatgctaaaaatgtaaggacggaaggttaagaaagccttgatggtgatattgtcgaagggctgcggtattgtctcgttactcttaacaatggtcactctaaaacctcgaaataacaccgggaatgtgacagtgcagcaacccatgccattgcaaatccctccttcggttgccatgtgcatttcctccatggaggcacacttgatcgtgcaatgacccacaaggttaccagtatctggatggaacaggtaaaccccgatcccacaaccgaggaacgccaagtaattgtaggtctcaacgttgagattcctcccaggagagtcccatgacaagttgtaggtgtcaactccatgaatcatggggatagtgtacatgatagaggcaagaacagttcctgaaggatagaggctaatcacctgagtcttagtgtttctcaagaagagcttcaaaggtttgctggtggtgtcgcaagtaagctcaaagccctgccgaaagcaaccaggcccaataccgtaaggataccagatgttcacttctccacatgttttggggcagggagcaagactagcagcagtgggaggaggtgctccagatgccaccaacatgacagtggatgctatgatccatagcaaaaccagctgcatgctagctattatagtttcttttgttgaacccat
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CDS seq | atgggttcaacaaaagaaactataatagctagcatgcagctggttttgctatggatcatagcatccactgtcatgttggtggcatctggagcacctcctcccactgctgctagtcttgctccctgccccaaaacatgtggagaagtgaacatctggtatccttacggtattgggcctggttgctttcggcagggctttgagcttacttgcgacaccaccagcaaacctttgaagctcttcttgagaaacactaagactcaggtgattagcctctatccttcaggaactgttcttgcctctatcatgtacactatccccatgattcatggagttgacacctacaacttgtcatgggactctcctgggaggaatctcaacgttgagacctacaattacttggcgttcctcggttgtgggatcggggtttacctgttccatccagatactggtaaccttgtgggtcattgcacgatcaagtgtgcctccatggaggaaatgcacatggcaaccgaaggagggatttgcaatggcatgggttgctgcactgtcacattcccggtgttatttcgaggttttagagtgaccattgttaagagtaacgagacaataccgcagcccttcgacaatatcaccatcaaggctttcttaaccttccgtccttacatttttagcattgcggatctcctgtccaataagataaatgcaagcaccgttggtgcttccatggcatacctctcaactgtcatcgcagatgaaccaaattgtccaacagctcggttggataataagacacaatttgcctgtggcagtaacaattgcatagatgtggcaaatggaggttattcttgtgcttgcccaggaaattctgatgatggcaatccctaccttcttgatgattgcaaacaagagtttaaccctaccccgaaaaagaattgttctagatcatgtggtagcacaaatattcctttcccgtttgggcttgagccaggctgttttgctaagaggagatttcaactgagttgtgcatcaaatcgcactcttattggaagaccacctgcaaaatatgaagtgacaaatatatcattagatgaaggactcctttatgttaacaagctttcagaatttgaagatgccaacacaaagtatttatcagtatactatggtggttctggatattttggccaacaattaatttatggtttggaaaagtctgatttatctgaagagtatggtgtttggaagtggtctgtgaccaatttgacgtgtgaagatgcaaaaagcaaaagtgcatatgcatgtgttagcacaaacagtgagtgtcttgatgttacacatgggaagctatatattggttatcgttgcaagtgctctcttggatttgaaggaaatccttatgtccaaaatggatgtacagatattgatgaatgctctataccaaactattgtaatgggacatgttataactttaaaggaagctatatttgttgtcctcatggtatgtcttatgatcgagtaagaaggcagtgcacttccaataagaggcaaaatattgttttaggacttaccattgggattagcagtggttttggagttctagctcttacattaattgcagctatattattcaaaaggtggaagagaagcactcggaagaaaattcgaagggcatacttccgaaaaaacaaaggccttctcttggagcagctgatctcatccagtaacaatgttactcctaacacaagaatattttctttggaagatttagagaaagcaaccaacaactttgactcaacacgtatccttggatatggaggccatggtactgtttacaaggggattttatccgatcaacgagtggttgccataaagaggtccaaaattgtggagaagagtgagattgaccaatttgttaatgaggttgccatcctttcccagattattcatcgtaatgtggtgaaactttttggttgttgccttgaatctgaggtgcctcttctagtgtatgaattcatttctaatggcacacttcatggtcttcttcatggtgatctgagcaccaattgtttgttgacatgggatgatcgaatgaggattgctctagaggctgcaggggcacttgcttatctccattcctctgctgcaatgccaatattccatagagatgtgaaatcaactaatatactcttggatggtaccttcactgctaaggtttcagatttcggtgcttctaggtccatttccattgatcaaactcgcgtagttacaatagtacaggggacatttgggtacttagatccagaatatttctatacaagccaattaaccgagaagagtgatgtttatagtttcggtgtgatacttgtcgaactcctaacaaggaagaagccaatttttctcaactgtcttggtgaacagaaaaatttgtgccactgttttcttcaaagcctaagagataaaacaacaatggatatactggattctcaagttgtagaggaagctagccaaacagagattgatggaattgcctcagttgcagagatgtgcttaaagactaaaggagcaaagagacctaaaatgaaagaagtggagttaagactgcaactcctaagagctgcaagatcgagggcatacaaggaacaagaatgtactccgaagtacaaatgtacttccctgaacagcaacaagaatgttgaaatgggccttgttgctaatccagaatatcaggttgtctctaggtgctataccatggagagagagatgatgtactcttcacagtttcctcgctga
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Protein seq | MGSTKETIIASMQLVLLWIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLRNTKTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFDNITIKAFLTFRPYIFSIADLLSNKINASTVGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVYYGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFEGNPYVQNGCTDIDECSIPNYCNGTCYNFKGSYICCPHGMSYDRVRRQCTSNKRQNIVLGLTIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNFDSTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEKSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTAKVSDFGASRSISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKTTMDILDSQVVEEASQTEIDGIASVAEMCLKTKGAKRPKMKEVELRLQLLRAARSRAYKEQECTPKYKCTSLNSNKNVEMGLVANPEYQVVSRCYTMEREMMYSSQFPR |
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Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_03g0041020 | OsLiXu_03g0041020.02 | Chr03 | 38276845 | 38280066 | - | NAM | ||
CDS seq | atgggttcaacaaaagaaactataatagctagcatgcagctggttttgctatggatcatagcatccactgtcatgttggtggcatctggagcacctcctcccactgctgctagtcttgctccctgccccaaaacatgtggagaagtgaacatctggtatccttacggtattgggcctggttgctttcggcagggctttgagcttacttgcgacaccaccagcaaacctttgaagctcttcttgagaaacactaagactcaggtgattagcctctatccttcaggaactgttcttgcctctatcatgtacactatccccatgattcatggagttgacacctacaacttgtcatgggactctcctgggaggaatctcaacgttgagacctacaattacttggcgttcctcggttgtgggatcggggtttacctgttccatccagatactggtaaccttgtgggtcattgcacgatcaagtgtgcctccatggaggaaatgcacatggcaaccgaaggagggatttgcaatggcatgggttgctgcactgtcacattcccggtgttatttcgaggttttagagtgaccattgttaagagtaacgagacaataccgcagcccttcgacaatatcaccatcaaggctttcttaaccttccgtccttacatttttagcattgcggatctcctgtccaataagataaatgcaagcaccgttggtgcttccatggcatacctctcaactgtcatcgcagatgaaccaaattgtccaacagctcggttggataataagacacaatttgcctgtggcagtaacaattgcatagatgtggcaaatggaggttattcttgtgcttgcccaggaaattctgatgatggcaatccctaccttcttgatgattgcaaacaagagtttaaccctaccccgaaaaagaattgttctagatcatgtggtagcacaaatattcctttcccgtttgggcttgagccaggctgttttgctaagaggagatttcaactgagttgtgcatcaaatcgcactcttattggaagaccacctgcaaaatatgaagtgacaaatatatcattagatgaaggactcctttatgttaacaagctttcagaatttgaagatgccaacacaaagtatttatcagtatactatggtggttctggatattttggccaacaattaatttatggtttggaaaagtctgatttatctgaagagtatggtgtttggaagtggtctgtgaccaatttgacgtgtgaagatgcaaaaagcaaaagtgcatatgcatgtgttagcacaaacagtgagtgtcttgatgttacacatgggaagctatatattggttatcgttgcaagtgctctcttggatttgaaggaaatccttatgtccaaaatggatgtacagatattgatgaatgctctataccaaactattgtaatgggacatgttataactttaaaggaagctatatttgttgtcctcatggtatgtcttatgatcgagtaagaaggcagtgcacttccaataagaggcaaaatattgttttaggacttaccattgggattagcagtggttttggagttctagctcttacattaattgcagctatattattcaaaaggtggaagagaagcactcggaagaaaattcgaagggcatacttccgaaaaaacaaaggccttctcttggagcagctgatctcatccagtaacaatgttactcctaacacaagaatattttctttggaagatttagagaaagcaaccaacaactttgactcaacacgtatccttggatatggaggccatggtactgtttacaaggggattttatccgatcaacgagtggttgccataaagaggtccaaaattgtggagaagagtgagattgaccaatttgttaatgaggttgccatcctttcccagattattcatcgtaatgtggtgaaactttttggttgttgccttgaatctgaggtgcctcttctagtgtatgaattcatttctaatggcacacttcatggtcttcttcatggtgatctgagcaccaattgtttgttgacatgggatgatcgaatgaggattgctctagaggctgcaggggcacttgcttatctccattcctctgctgcaatgccaatattccatagagatgtgaaatcaactaatatactcttggatggtaccttcactgctaaggtttcagatttcggtgcttctaggtccatttccattgatcaaactcgcgtagttacaatagtacaggggacatttgggtacttagatccagaatatttctatacaagccaattaaccgagaagagtgatgtttatagtttcggtgtgatacttgtcgaactcctaacaaggaagaagccaatttttctcaactgtcttggtgaacagaaaaatttgtgccactgttttcttcaaagcctaagagataaaacaacaatggatatactggattctcaagttgtagaggaagctagccaaacagagattgatggaattgcctcagttgcagagatgtgcttaaagactaaaggagcaaagagacctaaaatgaaagaagtggagttaagactgcaactcctaagagctgcaagatcgagggcatacaaggaacaagaatgtactccgaagtacaaatgtacttccctgaacagcaacaagaatgttgaaatgggccttgttgctaatccagaatatcaggttgtctctaggtgctataccatggagagagagatgatgtactcttcacagtttcctcgctga
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Protein seq | MGSTKETIIASMQLVLLWIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLRNTKTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFDNITIKAFLTFRPYIFSIADLLSNKINASTVGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVYYGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFEGNPYVQNGCTDIDECSIPNYCNGTCYNFKGSYICCPHGMSYDRVRRQCTSNKRQNIVLGLTIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNFDSTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEKSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTAKVSDFGASRSISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKTTMDILDSQVVEEASQTEIDGIASVAEMCLKTKGAKRPKMKEVELRLQLLRAARSRAYKEQECTPKYKCTSLNSNKNVEMGLVANPEYQVVSRCYTMEREMMYSSQFPR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_03g0041020 | OsLiXu_03g0041020.01 | Chr03 | 38276715 | 38280066 | - | NAM | ||
CDS seq | atgggttcaacaaaagaaactataatagctagcatgcagctggttttgctatggatcatagcatccactgtcatgttggtggcatctggagcacctcctcccactgctgctagtcttgctccctgccccaaaacatgtggagaagtgaacatctggtatccttacggtattgggcctggttgctttcggcagggctttgagcttacttgcgacaccaccagcaaacctttgaagctcttcttgagaaacactaagactcaggtgattagcctctatccttcaggaactgttcttgcctctatcatgtacactatccccatgattcatggagttgacacctacaacttgtcatgggactctcctgggaggaatctcaacgttgagacctacaattacttggcgttcctcggttgtgggatcggggtttacctgttccatccagatactggtaaccttgtgggtcattgcacgatcaagtgtgcctccatggaggaaatgcacatggcaaccgaaggagggatttgcaatggcatgggttgctgcactgtcacattcccggtgttatttcgaggttttagagtgaccattgttaagagtaacgagacaataccgcagcccttcgacaatatcaccatcaaggctttcttaaccttccgtccttacatttttagcattgcggatctcctgtccaataagataaatgcaagcaccgttggtgcttccatggcatacctctcaactgtcatcgcagatgaaccaaattgtccaacagctcggttggataataagacacaatttgcctgtggcagtaacaattgcatagatgtggcaaatggaggttattcttgtgcttgcccaggaaattctgatgatggcaatccctaccttcttgatgattgcaaacaagagtttaaccctaccccgaaaaagaattgttctagatcatgtggtagcacaaatattcctttcccgtttgggcttgagccaggctgttttgctaagaggagatttcaactgagttgtgcatcaaatcgcactcttattggaagaccacctgcaaaatatgaagtgacaaatatatcattagatgaaggactcctttatgttaacaagctttcagaatttgaagatgccaacacaaagtatttatcagtatactatggtggttctggatattttggccaacaattaatttatggtttggaaaagtctgatttatctgaagagtatggtgtttggaagtggtctgtgaccaatttgacgtgtgaagatgcaaaaagcaaaagtgcatatgcatgtgttagcacaaacagtgagtgtcttgatgttacacatgggaagctatatattggttatcgttgcaagtgctctcttggatttgaaggaaatccttatgtccaaaatggatgtacaggacttaccattgggattagcagtggttttggagttctagctcttacattaattgcagctatattattcaaaaggtggaagagaagcactcggaagaaaattcgaagggcatacttccgaaaaaacaaaggccttctcttggagcagctgatctcatccagtaacaatgttactcctaacacaagaatattttctttggaagatttagagaaagcaaccaacaactttgactcaacacgtatccttggatatggaggccatggtactgtttacaaggggattttatccgatcaacgagtggttgccataaagaggtccaaaattgtggagaagagtgagattgaccaatttgttaatgaggttgccatcctttcccagattattcatcgtaatgtggtgaaactttttggttgttgccttgaatctgaggtgcctcttctagtgtatgaattcatttctaatggcacacttcatggtcttcttcatggtgatctgagcaccaattgtttgttgacatgggatgatcgaatgaggattgctctagaggctgcaggggcacttgcttatctccattcctctgctgcaatgccaatattccatagagatgtgaaatcaactaatatactcttggatggtaccttcactgctaaggtttcagatttcggtgcttctaggtccatttccattgatcaaactcgcgtagttacaatagtacaggggacatttgggtacttagatccagaatatttctatacaagccaattaaccgagaagagtgatgtttatagtttcggtgtgatacttgtcgaactcctaacaaggaagaagccaatttttctcaactgtcttggtgaacagaaaaatttgtgccactgttttcttcaaagcctaagagataaaacaacaatggatatactggattctcaagttgtagaggaagctagccaaacagagattgatggaattgcctcagttgcagagatgtgcttaaagactaaaggagcaaagagacctaaaatgaaagaagtggagttaagactgcaactcctaagagctgcaagatcgagggcatacaaggaacaagaatgtactccgaagtacaaatgtacttccctgaacagcaacaagaatgttgaaatgggccttgttgctaatccagaatatcaggttgtctctaggtgctataccatggagagagagatgatgtactcttcacagtttcctcgctga
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Protein seq | MGSTKETIIASMQLVLLWIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLRNTKTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFDNITIKAFLTFRPYIFSIADLLSNKINASTVGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVYYGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFEGNPYVQNGCTGLTIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNFDSTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEKSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTAKVSDFGASRSISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKTTMDILDSQVVEEASQTEIDGIASVAEMCLKTKGAKRPKMKEVELRLQLLRAARSRAYKEQECTPKYKCTSLNSNKNVEMGLVANPEYQVVSRCYTMEREMMYSSQFPR
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
SE | Chr03 | 38278073 | 38278547 | - | OsLiXu_03g0041020.02 | OsLiXu_03g0041020.02,OsLiXu_03g0041020.01 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.696575 | 0.573087 | 0.974325 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0841100 | RBH | 0.947163 | 0.324736 | 0.514060 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g62430 | RBH | 0.630160 | 0.310452 | 0.130189 |
Nipponbare | IRGSP 1.0 | RAP-db | Os03g0841100 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041520 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0041220 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0041280 | RBH | 0.491563 | 0.0 | 2.182140 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0041510 | RBH | 0.000000 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0041030 | RBH | 3.674425 | 1.183783 | 8.035265 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0603800 | RBH | 3.6035375 | 5.426689 | 1.5212625 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0040770 | RBH | 0.138357 | 0.0 | 0.684264 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0606300 | RBH | 2.7645215 | 5.6929965 | 2.535318 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0041340 | RBH | 0.174841 | 0.034425 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0041260 | RBH | 0.250550 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040960 | RBH | 2.823882 | 5.411603 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0040920 | SBH | 0.220756 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0041060 | RBH | 0.319973 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G040830 | RBH | 0.521105 | 0.957404 | 0.254220 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0040540 | RBH | 0.654908 | 6.574251 | 1.513622 |