Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0032280 | OGI:03082670 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:31887018-31887748 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaggtccgcgtacgccggcgcttcaccttgccctcgtccggccgccgccgtgagtcagctgggaggcgcgtcgctgtgaccggagaggcgccaggccatcctgccctgccgccgtgaccGggggcgcctggaggcggccggccgccgggcctgacggcgcgttggtgcaggcgggcagccgcgcagcccgagcccggcgtgtggaggaggccgcgctgctcctgccgcgccgcacgtcccgatttcggcggcctcgactccacgatggatttcagcgtccgagctcgcatccagagcccgcaccagtcggccacccacttcgtcgccggcgagaggtgacaccaccgcccggcttcgtccagggtaggagtcactggtggttgagttcgtggagaacgccacacctttttctgtgcctgcgaggtgtttgtggaaatgccctgccgtctgggatgatgcaaagtcctgattgaaagtgaattgttattgtttggctttgtgagattaaaagcaaattgattctgtaatcttgattgagattgatttggttgtatgactcatatatgctgtgatttgaatgaatgaatgaatcagtaacttttgatgatgttttctaaaaaattttgagatgtttgagatgttgcccaggtccatgatttgtttaggtttaaagtctggaatggacttatggtattgtctggtttatactggacatgagttgtgctgccat
More
|
||||||||||
| CDS seq | atggcagcacaactcatacggcagggcatttccacaaacacctcgcaggcacagaaaaaggtgtggcgttctccacgaactcaaccaccagtgactcctaccctggacgaagccgggcggtggtgtcacctctcgccggcgacgaagtgggtggccgactggtgcgggctctggatgcgagctcggacgctgaaatccatcgtggagtcgaggccgccgaaatcgggacgtgcggcgcggcaggagcagcgcggcctcctccacacgccgggctcgggctgcgcggctgcccgcctgcaccaacgcgccgtcaggcccggcggccggccgcctccaggcgccccCggtcacggcggcagggcaggatggcctggcgcctctccggtcacagcgacgcgcctcccagctgactcacggcggcggccggacgagggcaaggtgaagcgccggcgtacgcggacctga
More
|
||||||||||
| Protein seq | MAAQLIRQGISTNTSQAQKKVWRSPRTQPPVTPTLDEAGRWCHLSPATKWVADWCGLWMRARTLKSIVESRPPKSGRAARQEQRGLLHTPGSGCAAARLHQRAVRPGGRPPPGAPGHGGRAGWPGASPVTATRLPADSRRRPDEGKVKRRRTRT |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0032280 | OsNaBo_03g0032280.01 | Chr03 | 31887018 | 31887748 | - | NAM | ||
| CDS seq | atggcagcacaactcatacggcagggcatttccacaaacacctcgcaggcacagaaaaaggtgtggcgttctccacgaactcaaccaccagtgactcctaccctggacgaagccgggcggtggtgtcacctctcgccggcgacgaagtgggtggccgactggtgcgggctctggatgcgagctcggacgctgaaatccatcgtggagtcgaggccgccgaaatcgggacgtgcggcgcggcaggagcagcgcggcctcctccacacgccgggctcgggctgcgcggctgcccgcctgcaccaacgcgccgtcaggcccggcggccggccgcctccaggcgccccCggtcacggcggcagggcaggatggcctggcgcctctccggtcacagcgacgcgcctcccagctgactcacggcggcggccggacgagggcaaggtgaagcgccggcgtacgcggacctga
More
|
|||||||
| Protein seq | MAAQLIRQGISTNTSQAQKKVWRSPRTQPPVTPTLDEAGRWCHLSPATKWVADWCGLWMRARTLKSIVESRPPKSGRAARQEQRGLLHTPGSGCAAARLHQRAVRPGGRPPPGAPGHGGRAGWPGASPVTATRLPADSRRRPDEGKVKRRRTRT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0027660 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0015310 | SBH | 4.879800 | 8.909056 | 12.071543 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0002600 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0027430 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0504900 | RBH | 0 | 0 | 0.0151775 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0032440 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0504500 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0027260 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032680 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0027390 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0032620 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G032430 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0002440 | RBH | 0.0 | 0.0 | 0.0 |
